Anoplopoma fimbria (sablefish): 129094333
Help
Entry
129094333 CDS
T09102
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129094333 (chd1l)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129094333 (chd1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
129094333
NCBI-ProteinID:
XP_054458435
LinkDB
All DBs
Position
8
Genome browser
AA seq
1002 aa
AA seq
DB search
MRRVLEKIKQHVAEEQQPAVLQGDLLTCGLRGIQLRPYQLDGVQWLTQCLKNQQGCILGD
EMGLGKTCQTISLLVFMSGALGKKGPFLVLSPLSVLENWRKELECFAPSLTVLSYKGDKE
RRAELQKETQTQDFNVLLTTYELCLKDASFLRRWKWKVLVVDEAHRLKNQNSLLHKVLTE
FSVGFRVLLTGTPIQNNLQELYSLLSFIQPNIFTAEEADDFTDYYSNVQSQPALAAELQS
VLEPFLLRRVKSEVAVDLPKKTELLMYHGMSALQKKYYKAFLMKDLEAFGNDQGNKNRLL
NILMNLRKCVDHPYLFDGVEPEPFEMGEHLVEASGKLSLLDGMMSYLHKGGHRILLFSQM
TRMLDILQDYMEFRGYSYERLDGSVRGEERNLAVKNFSSKDIFVFLLSTKAGGVGLNLTA
ADTVIFMDSDFNPQNDLQAAARCHRIGQNRPVKVIRLLARDTVEEIMYSRAASKLQLTNT
VIEEGRFSLLDQAQTAAAGLQLSEILKFGVDKLLSSSESSVTEVKLEKILGPSRDGQWID
EEFSSLREEEEEEEESGSESDGQNHMYYFEGKDYSRDPSSEDQKSFDRLLEDQMAEFQKA
AGEGRALRHKAGVSLSLGMPTRKRKPLTEAELELKRQRREEAAAKRAKLQEDVKKKQQEQ
KHKKKMSWWQSCGYRSRCLPSVDSEEEEDEEEDDGSVCSTDSDSSAIHYVLGDVTHPHTA
QGDAIIVHCVDDSGRWGRGGLFTALELRSDEPRQKYELAGKMNDLDFGNVLLFPIDDKQS
RLDGRDQLALIVAQQRDKDNNLSGILLSALDDGLKKIYAAAKRNKASVHLPRIGHSTRGF
NWYGTERLIRKHLASRGVATFIYYHNRAAKSSAAPQTSSNSPADEETEPEASGPSAPLQS
VCGPTELPDFMKGVHVFFYNLAASKRKRLARHLITYDGDEEEIMSPEVTHIVAEVESSVQ
SQELQDLVCRFSQAVPVQTDWMESCFSKQRRVDTTPFTHRLT
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgggttttagagaagattaaacaacacgtagcggaggagcagcagccggctgtt
ctccagggagacctgctgacatgcgggctgagagggatccagctgagaccttaccagctg
gatggggtccagtggttgacccagtgtctgaagaaccagcagggatgcattctgggagat
gagatgggtttaggaaaaacctgtcagacgatctctctgctggtgttcatgtccggagct
ctcgggaagaaaggtccgttcctggttctgagcccgctgtctgtcctggagaactggagg
aaggagctggaatgcttcgctccgtctctcactgtgttgagttacaaaggagacaaagag
agacgagctgagcttcagaaggaaacacaaactcaggactttaatgttctgctcactaca
tacgagctgtgtctcaaagacgcttcattcttaagacggtggaagtggaaggtgctcgtt
gtagacgaagctcacaggctgaagaatcagaactcattattacacaaagtcttgactgag
ttctcagtgggtttcagagtcctgctgacaggaaccccgatccagaacaacctgcaggag
ctctactcgctgctgagcttcattcagccaaacatcttcacagctgaagaggcagacgac
ttcaccgactattactccaacgttcagagtcaacccgctctagctgctgagctgcagagc
gtcctggaacccttcctgctccgtcgcgtgaagtcagaagtggctgtcgatctgccgaag
aagacggagctgctgatgtaccacggcatgtcggccctgcagaagaaatactacaaagcc
tttctgatgaaggatctggaggcttttggaaacgaccagggcaacaagaaccggctgctg
aacatcctgatgaacctgaggaagtgtgtcgaccacccgtacctgtttgacggggtggag
ccggagccgtttgagatgggggagcatctggtggaagccagcgggaaactctctcttctg
gacgggatgatgagttaccttcacaaaggaggccatcggatccttctgttctctcagatg
acgaggatgctggacattcttcaggattacatggagttcagagggtatagctatgagcgt
ctggacgggtccgttcgaggggaagaaagaaatctagcagtgaagaacttcagcagcaaa
gacatctttgtctttctactcagcactaaagcaggcggagtcggtctgaacctcacagcc
gctgacaccgtcatcttcatggacagcgacttcaaccctcagaacgacctgcaggccgcc
gcacgctgccaccggattggtcagaacaggccggtgaaagtgatccgtcttctggcgaga
gacacggtggaggaaatcatgtactccagagccgcgtccaagttacagctcaccaacacc
gttattgaagaaggacgcttctctctgctggaccaagctcagacagccgctgcaggactg
cagctcagtgagatcttgaagttcggcgtagataagcttctgtcctcctccgagagctcg
gtgacggaggtgaagctggagaagatcctcggtccgtcgcgtgatggtcagtggatcgat
gaagagttcagctcgctcagagaagaagaagaagaggaagaggagagcggttctgaatct
gacgggcagaaccacatgtactactttgagggtaaggactacagtagagacccgagctct
gaagaccagaagagctttgaccgtttgcttgaggaccagatggccgagttccagaaagct
gcaggagaaggacgagctctgaggcacaaagctggagtctcgctgtccctcgggatgcca
acgaggaagaggaaacccctgacggaggctgagctggagctgaaacgccagagacgggag
gaggctgcagccaagagagccaaactccaggaggacgtgaagaagaagcaacaagagcag
aaacacaagaaaaaaatgtcgtggtggcagtcgtgcggttacaggtcacgttgtctgccg
tcggttgacagtgaagaagaagaagatgaagaagaggatgacggcagcgtttgctccaca
gactctgacagctcggccatccactacgtcctcggggatgttactcatcctcacaccgct
cagggagacgccatcatcgtccactgtgttgacgactctggccggtggggaagaggaggc
ctcttcaccgctctggagctgagatcagatgaaccgcgacagaagtacgagttagccggc
aaaatgaacgatttggactttggaaatgtgcttctcttccccatcgatgacaaacagtcc
agattagacggccgagatcaactggccctgatcgtcgcacagcagagagacaaagacaac
aacctgtctgggattcttctgagcgctctggatgacggtctgaagaagatttacgctgcg
gccaaaagaaacaaagccagcgtccatcttcctcgcatcggtcactccacccgaggattc
aactggtacggaactgagcggctcatcaggaaacatctggcgtccagaggcgtcgccacc
ttcatatattaccacaacagagcagcaaagagctcagctgctcctcagacatcctccaac
agtccggctgatgaagagacagaaccagaagcctccggcccctcagctcctctccagagc
gtctgtggccccacagaactccctgatttcatgaagggggtccatgtgtttttctacaac
ctggctgcttcaaagaggaagaggctggcccgacacctcatcacttatgacggagacgag
gaggagatcatgagtccagaggtcacacacatcgtagccgaggtggagagcagcgtccaa
tcacaggagctccaggatctggtttgtcggttctctcaggccgtcccggtgcagacggac
tggatggagtcctgcttctccaaacaacgaagagtcgacacgactccgttcacacatcga
ctcacataa
DBGET
integrated database retrieval system
