Anoplopoma fimbria (sablefish): 129094334
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Entry
129094334 CDS
T09102
Symbol
tmco1
Name
(RefSeq) calcium load-activated calcium channel
KO
K21891
calcium load-activated calcium channel
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129094334 (tmco1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129094334 (tmco1)
Membrane trafficking [BR:
afb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
129094334 (tmco1)
Transporters [BR:
afb02000
]
Other transporters
Pores ion channels [TC:
1
]
129094334 (tmco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF6809
DUF5683
DUF2368
Exonuc_VII_L
Vpu
DSHCT
DUF4257
Piezo_TM1-24
DLH
Nucleoside_tran
Myc_target_1
SLC52_ribofla_tr
Peptidase_S49_N
DivIC
ATG14
Motif
Other DBs
NCBI-GeneID:
129094334
NCBI-ProteinID:
XP_054458436
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All DBs
Position
8:395559..400452
Genome browser
AA seq
188 aa
AA seq
DB search
MSTMFADTILIVFISVCTALLAEGITWVLVYRTEKYKRLKAEVEKQSKKLEKKKETITES
AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFV
PLSYIQGLSHRNLLGEDYTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGP
PPQAAKFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgtttgcggacactattctgattgtgttcatctctgtctgcacagcgctg
ctggctgaagggatcacctgggtattagtgtatcgcactgaaaagtacaagaggctaaag
gctgaagtggaaaaacagagcaaaaaacttgagaagaaaaaggaaaccatcacagaatct
gcaggacgtcaacagaagaagaaaattgagagacaagaagagaaactgaagaacaacaac
agagacttgtctatggtgcgcatgaagtccatgttcgccataggcttctgcttcacagct
ttgatgggcatgttcaactccatctttgacggaagagtagtggccaagttgccattcgtg
ccgctctcctacatccagggactgtcgcaccgcaacctgctgggcgaggattacacggac
tgctcctttatcttcctctacatcctttgcaccatgtccatcagacagaacatccagaag
atgctcggcctcgcgccctccagagctgcaaccaaacaggctggaggcttcctgggacct
cctccccaagcagccaagttttcctga
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