Anoplopoma fimbria (sablefish): 129094413
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Entry
129094413 CDS
T09102
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129094413 (sned1)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
129094413 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
Fn3_Dep-1_3rd
MAGP
EGF_3
cEGF
EGF_MSP1_1
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
129094413
NCBI-ProteinID:
XP_054458552
LinkDB
All DBs
Position
8:complement(2319281..2344541)
Genome browser
AA seq
1391 aa
AA seq
DB search
MVLVLRALLPCFCTLLSLDLLPRVELAVPLEDFYPFGQDKGDSQTIAQDDGGSRLVEISV
AFPFFGDTHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGSVFY
RESREPSILRRASGEVKTYFSEFPNFNATWVLISTWHQVTFFGGNSRTPVNTFQVVLITD
GELSFTIFQYNNITWTTGMHASSGGNLAGLGGIAAQAGFNAGDGKRYFNIPGSRTADVVN
VEGTTNVGYPGKWVFRIDDANVEVGGCNDSASVCPHLRPCLNGGQCIDDCITGNPSFTCS
CLAGFTGRRCQIDVNECASLPCQNGGTCKDQINSFLCHCPPGYTGIQCETDIDECKDGPC
LNNALCVQGTGSFTCVCEPGYTGILCETDINECESQPCLNGGECVDQVANFTCVCPATFT
GALCETELVVLQVNSTEAENQTAACEEEDCTKHRICEYASSGAYNCTCAPGFYGDECEEE
CLCQNGGVCVDINGTCECPSGYTGLYCQFEVTQTPCSHSRPCPDGGPCLEYGGAYLCTCQ
TSAADLDHKDFYPYVQPRSVCDSSPCLNGGYCYERDGGYTCECKYGYLGKHCEKVRLNTC
ASGPCRNGGSCKEEAGSYRCVCPYRFTGKHCEVGKPDPCASSPCLNGGTCFHYIGKYKCE
CTEAFSGRHCQINTSSVQTTAELGCGLPPQVKHGEVQFSLTTTGSMAVYICNSGFTSVPR
ATQSICGIQGDWSQPPLCEEINECLSQPCLNGGTCQNQVGSYQCECVDGFSGNRCQTDIN
KCLSEPCKHGGTCEDRPGSYLCHCSQGFKGQNCEIEKDWCESNPCLNGGMCRGYRLNYLC
ACKDGFFGDQCQMLENPCVLQPCGNRGLCRSDKRGNYNCVCRVGHTGKDCEKDLLPPSGL
HVLRVEENEVELRWDEPEPTDSLISGFLVTYTLLGWSNPKSDLLERQQSTHVMRGLVPGL
LYNISTFSIKRNTNSNDNSQPATALIRTRPRPVEQLQVVNVSSSQVWLSWLVEAARHAAV
SRVHVSLTPSDGSEARTVVLNTSTTEHTFSSLLPGQMYTVDVLTQSGIRPDEFPSTSHSA
GPLQFWTRPLPPQNLSLSHVTTNSALITWSRHPRNVPDGFVVNVTRGLNTRSRFLPNGKL
GSYTLRELTPGQHYYVALTSVKSTGQEQIHSIPQHLTFTTLPMGARSGRRERPSGTGQGT
QVGRILPPSQPQDLGDRTETENSEELPRYTELIDRRGKITAKFTHLPRKAVRHRTRPDTP
MRLEKMEETTNKISLALEIQEEGLRTKSELPQDCRSLPCQNGGTCVSEGDSFICDCAAEF
KGRQCELSCHREPHPCTRLYSETKSVPVWEGGVCHYLYKRTYKVQQDVCYREICEPTPLK
KSPIRGTNRQQ
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgcgagccctgctgccctgcttctgcaccctgctctccctggacctg
ctgcctagggtggaactggccgtgcccctggaggacttctacccctttggccaggacaag
ggggactcccagaccatcgctcaggacgacggaggctccaggctcgtggagatctccgtt
gctttccccttctttggagacacgcacacgggactatacgtcaacaacaatggccttgtg
tctttcctgagggaggtgtctcagttcacgcctgtggcttttccgatcgctggggacagg
agggtggtggctccgttctgggccgatgtggacaaccgtcgagcagggagcgtcttctac
agagagagccgggagccctccatcctgaggagggcctcgggtgaggtcaagacgtacttc
tcggagttccccaacttcaatgcaacatgggtcctcatctccacatggcaccaagttact
ttcttcggaggcaactcccgcacaccggtaaatactttccaagtggtgcttattacagat
ggagagctttccttcaccatattccagtacaataacatcacttggaccacaggcatgcat
gccagcagtggaggaaacctggctgggctgggagggattgcagcgcaggcaggtttcaac
gctggagatggaaagcgctacttcaacatccccggctcgcgcacggctgacgtggtgaac
gttgagggaaccaccaacgtgggctaccccggcaaatgggtcttccgtatagacgatgca
aatgtggaagtggggggctgcaatgactccgcatcagtgtgcccgcacctgcgaccatgt
ctgaacggaggccagtgcatcgacgactgcatcacaggcaacccctccttcacctgctcc
tgcttggctggcttcaccggcaggcgatgccagatcgatgtcaatgagtgtgcctcactt
ccttgccagaacggagggacttgtaaagaccagattaatagtttcctatgtcactgtcca
cctggatacactgggattcagtgtgaaacagacattgacgagtgcaaagacggaccgtgc
ctcaacaacgcgctgtgtgttcaaggcactggcagtttcacctgtgtgtgtgaaccgggt
tacactggtatcctgtgtgagacagacataaatgaatgtgagtcacagccctgtctgaat
ggaggagagtgcgtcgatcaggtggccaacttcacctgtgtttgtcccgccaccttcact
ggagcgctctgtgagacagagttggtggtgctgcaggtcaattcaaccgaggcggaaaac
caaacagccgcatgtgaagaggaagactgcacgaagcaccggatttgtgaatacgccagc
tcgggagcctacaactgcacatgtgctccaggcttctacggggacgagtgtgaagaggaa
tgcctttgccagaatgggggtgtctgtgtggacatcaatgggacttgtgaatgcccttca
gggtacacaggactctactgtcagtttgaagtaacccagacgccatgcagtcacagcagg
ccgtgtcctgatggcggtccttgtttggagtacggaggagcctacctgtgcacatgtcag
actagcgcagcagatctggaccacaaggacttctacccctatgtacagccccgatcggtc
tgcgactcctctccgtgtctgaatggaggctactgctacgagagggatggaggctacacc
tgcgaatgcaaatacggatacttggggaagcactgtgaaaaagtcagactcaatacctgt
gcttctggtccctgccgcaatggaggctcctgtaaggaagaggcagggagctacagatgt
gtgtgtccttatagattcactggaaaacactgtgaagtggggaagccagacccctgtgcc
tccagcccctgtctgaatggggggacatgtttccactacataggaaagtacaaatgtgaa
tgcacagaggccttcagcggcaggcactgtcaaataaacacgagctcagtacaaaccacc
gcagagcttggctgcgggctgcctccacaagtgaagcacggcgaggtgcagttctccttg
acaacaaccggctccatggcggtctacatatgcaactcaggcttcacgtctgtgcccaga
gccacccagagcatctgtggtattcagggagactggagccagccacccctttgtgaggag
atcaacgaatgcctatcacagccttgtctcaatggcggtacatgtcagaaccaggttgga
tcctaccagtgtgagtgtgttgatggcttcagcggaaaccgctgtcagacagacataaac
aaatgcctgtcggaaccctgcaagcacggggggacgtgtgaggaccggcccggctcctac
ctgtgtcattgttctcaaggctttaaaggccagaactgtgaaatagagaaggactggtgt
gaatccaacccctgtctaaatggaggcatgtgtcggggttacaggctgaattatttgtgc
gcgtgcaaagacggcttctttggggaccagtgccagatgttggagaacccgtgcgtactg
caaccttgtggaaaccgtggcctctgcaggagtgacaagagagggaactacaactgcgtt
tgtagagtgggacacacaggcaaagactgtgagaaagacctgctgcctccctccggtctc
catgtgctgcgcgtggaggagaacgaggtggagctgcgctgggacgagccggagcccaca
gacagcctgatcagcgggttcctcgtcacgtacactctcctgggctggagcaatcccaaa
tcggacctgctggagaggcagcagtccacccacgtcatgcgaggcctagtgcccggcctg
ctgtacaacatctccaccttctctatcaaacgcaacaccaacagcaacgacaacagccag
cctgccactgcactcatacgcaccagacctcggccggtggagcagctgcaggtggtcaac
gtgtcctcctctcaggtgtggctgagctggctggttgaggcggctcgtcatgcagccgtc
agcagggtgcacgtgtctctgacgccttcagatggcagcgaggctcgcactgtggtgctc
aacacgagcaccacggagcacaccttcagttccttactccctggtcagatgtacacagtg
gatgtgttgactcaaagtggaatcagaccagatgagtttccgtccaccagccactcagct
gggccactgcaattctggacaaggcctctccccccacagaacctctccctgtcacatgtc
accactaactcagcactgatcacctggagccgccacccgagaaacgtcccagatggcttc
gtggtcaacgtgacccgagggttgaacaccaggagtcgcttcctgcccaatgggaaatta
ggatcgtatactctgcgtgaactgacgccagggcagcactactatgtggccctcacgtcg
gtgaaaagcacagggcaggaacagatccacagcatacctcaacatttaaccttcactacc
ttgccaatgggggcaagatcagggagaagagagaggccaagcgggactggacaggggact
caggtaggacgcatacttcccccatctcagcctcaggacctgggagacaggacagaaaca
gagaactcagaggagttacccagatacacagaacttattgacagaaggggaaagataaca
gccaagttcactcacttgcctcgaaaagctgttcgacatcgcactagacctgacacacca
atgagattagagaagatggaagaaacaacaaacaaaatcagccttgcacttgagattcaa
gaggaaggtttaagaacgaagtctgagttgccacaggactgccgcagtctgccctgccag
aatgggggcacatgtgtgagcgaaggggactccttcatctgcgactgtgcagccgagttc
aagggcagacagtgtgagctgtcgtgccaccgagagcctcacccctgcacccgtctctac
tccgagaccaagagtgtgcccgtctgggagggtggagtgtgccactacctgtacaaaagg
acgtataaagtacagcaggatgtttgttatcgagagatttgtgaaccgacgcctttaaag
aaaagtccgatcagaggaacaaacagacaacaataa
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