KEGG   Anoplopoma fimbria (sablefish): 129094511
Entry
129094511         CDS       T09102                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afb03036]
    129094511 (kdm4b)
Enzymes [BR:afb01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     129094511 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     129094511 (kdm4b)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    129094511 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN DUF4537 PHD DUF7141 53-BP1_Tudor Tudor_5 Tudor_3 DUF61
Other DBs
NCBI-GeneID: 129094511
NCBI-ProteinID: XP_054458692
LinkDB
Position
8:14319397..14366450
AA seq 1198 aa
MATDKPMDAVPAPHPAPASPPDTAPASPPALSSSAAQDQIPTEGPAVAEIRDTAVTPEHD
AAPDLPLPLPTDPDAAPVLVPGSELPPVPLLPVSAKNPSCKIMTFRPTMEEFKDFAKYIV
YMETQGAHRAGLAKVIPPEGWKPRRSYDTIEDMVIPAPIMQVVTGQSGLFTQYNIQKKSM
TVSEYRKLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEDIQEWNIGH
LNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQSKSWYAIP
PEHGKRLERLAKGFFPGSSQGCDAFLRHKMTLLSPSILKKYGIPFDRITQNEGEFMITFP
YGYHAGFNHGFNCAESTNFATLRWVDYGKMATQCTCRKDMVKISMDVFVRCLQPDRYELW
KQGKDTTVLDHLKATGLSSPELERWREHRVNHRANVLRRAMQKMKQVRRLKLEEVKVLAQ
EGIELNAAEYQRQVEEREAQRRQEREERLAKEAMLTLEALEREEQEAAEAAAKAAETPAV
EEPEAKPQNLTEDTEKKKHKKLKKISNIHNAITGFEEAFEQFATSSIKPSKNTMVSQPEE
GNIGSPRQSDVPADNKLDACFSKVKMPTEVKKSRRHPLSKPPMRSPLSILKQDPTSDKEL
SSPMPLDSDMKKQEHLWQNHSPNFLAEKAFNAAVAALQPHCAICSLFCPYTKPHKDIFVA
NDTQRASLPRLTRPLVPEMCFSVGAGNTEPPPTNYHIGEDGTSPLLCCSSCHMQVHASCY
GVKPDSVSDSWMCSRCAAGAWTVECCLCNLRGGALKTTTDNRWVHVICAIAVAEARFVNA
IEREPVDVGAVPETRKNLKCVFCHGKTANQNRGACIQCSHDNCATSFHVTCAQIAGVVMT
PADWPYVVSVTCHKHKRVPSKPRTTPKGPQSLNLGQRVIGRNSDGWYYHCTIIGMATQTF
YEVNFDDGSYCDNVHPENILSHDCLRSGPPEVGELIVVSPPKGQVVNASFIRQHTHKFYQ
VEFQDQSQLILKHSEIHQLDQELPKRVRARLAIPVPLEEVSSADEAQAAKRRRLPSDSDQ
KAETSMEMTNKPASPLTTAPVGARAEEDHSIHTLPTSQPLSQPTITPHGAATPTNGNQMD
AETPMDMSVALSDALTESSLAMDPTPTPQSTPFSVDVSYMESLLHSHFTQDSSQGPLY
NT seq 3597 nt   +upstreamnt  +downstreamnt
atggctaccgacaagcccatggacgcggtgccagctcctcatcctgccccagcctcaccc
cccgacaccgccccagcttcccctcctgctctcagctctagtgcagcccaggaccagatt
cccaccgaggggccagcagtagctgaaatccgagacacagcggtgaccccagaacatgat
gctgctccagatctccccctgccgcttcctacagacccagacgctgccccagtccttgtt
ccaggttctgagctgcccccggtacctctgctgccagtcagcgctaagaaccccagctgc
aagatcatgaccttccggcccaccatggaggagttcaaagacttcgccaaatacatcgtc
tacatggagactcaaggagctcaccgtgctggcctggcaaaggtgattcccccggagggc
tggaagccccggaggtcctatgacaccatcgaggacatggtcattccagctcccatcatg
caggtggtgaccggacagtcgggtctattcactcagtacaacattcagaaaaagtctatg
accgtgagcgagtaccgcaaactggccaacagcaagaagtactgcactccccggcacaaa
gactttgatgacctagagaggaaatactggaagaacctgacatttgtgtcgcccatttat
ggtgcagatgtcagtggctccatctatgatgaggacattcaagagtggaacattggccat
ctcaacacactgctggatatggtggagcaggagtgtggcatcgtcatcgagggtgtcaac
actccctacctctacttcggcatgtggaagaccacatttgcctggcacactgaggacatg
gacctctacagcatcaactacctgcactttggacagtcaaaatcctggtacgccatccca
cctgagcatggcaagaggctggagaggctggcaaaaggcttcttccctggcagctcccaa
ggctgtgacgccttcctacgtcataagatgacgctgctatctccctccatcctgaagaaa
tatggcattccctttgacaggataactcagaatgaaggagagtttatgatcacctttccc
tatggctaccatgctggcttcaaccatggcttcaactgcgcagagtccacaaactttgcc
accctgcgctgggtcgactacggcaaaatggctacccagtgtacctgtcgtaaagacatg
gtgaagatctccatggacgtatttgtccgctgcttacagcccgatcgctacgagctgtgg
aagcagggcaaagacaccacggtgttggaccaccttaaggccactgggctcagcagcccc
gaactagagcgctggagggagcatcgtgtaaaccacagagcaaatgtcctgagaagggcc
atgcagaagatgaagcaggtccgtcgtctaaagctggaggaggtgaaggtgctggcccag
gaaggcattgagttgaatgctgcagagtaccagcgtcaggtggaggagcgtgaggcccaa
cggaggcaggagagagaggagcgtctagccaaggaggccatgttgaccctggaggccttg
gagcgtgaggagcaggaggctgccgaggctgctgccaaggcggcagagactccggctgta
gaggaacccgaggccaaaccacagaacctgacagaagacacagagaaaaagaagcataaa
aagttgaagaagatctcaaatatccacaatgccatcactgggtttgaggaagcatttgag
cagtttgctacatccagcatcaagccttcaaagaacaccatggtcagtcaaccagaggag
gggaacattggttctccaagacagagtgacgtcccagcagacaacaagctggatgcatgc
ttctccaaggtgaaaatgccaacagaggtaaagaagagtcgccgtcaccccctcagcaag
ccacccatgcgctcccctctgtcaatcctcaaacaagacccgaccagcgacaaagagctg
tcctcccccatgcccctggacagtgacatgaagaaacaggagcacctgtggcagaatcac
tcgcccaacttcctggcagagaaggcctttaatgctgcggtggcagcactccaaccacac
tgcgcgatctgttcactcttctgtccctatacaaagccacacaaagacatttttgttgca
aatgacacccagcgtgcctcccttccccgcctgactcgtcccctggtcccagagatgtgc
ttcagcgttggtgcaggcaacactgaacctccacccacaaactaccacattggagaggat
ggaaccagtcctctgctttgctgttcatcttgccacatgcaggttcatgccagctgttac
ggtgtaaagccagactccgtcagtgattcctggatgtgctccaggtgtgcagcaggagct
tggacagtggagtgttgtctctgtaacttgcgaggaggagctttgaagactaccacagac
aaccggtgggtccatgtcatctgtgccatcgctgtagcggaagctcgcttcgtcaacgcc
attgagagggaaccggtggacgttggtgctgttccagaaacacgcaagaatctgaagtgt
gttttctgccatggcaagactgccaatcagaaccgcggcgcctgcatccagtgctcacat
gataactgtgccacctccttccacgtcacctgcgcccaaatcgccggagtagtcatgacg
ccagccgactggccctacgtggtgtccgtcacctgccacaagcataaaagggtcccctcg
aagcctcggacaacgcccaaaggcccacagagtctgaacctaggccagagggtgattggt
cgcaacagtgacggctggtactaccactgtaccatcatcggcatggcaacacagacattc
tacgaggtcaactttgacgatggctcgtattgtgacaacgtgcacccagaaaacatctta
agtcatgactgcttgcgatccggtcctcctgaggtgggggagttgattgtggtcagccca
cccaagggtcaggttgtcaatgcttcctttatccgacagcacacccacaaattctatcag
gtcgagttccaggaccagagccagctgatactaaaacactcagaaatccatcagctggac
caggaactgccgaagagggttagagccagactggccatacctgtgccactggaggaggtt
tcatcagcagatgaagcccaagcagcaaaacgccggcgcctgccctcagactcggaccaa
aaggctgaaacctccatggagatgacaaataaacctgccagccccctaactacagccccg
gtaggagcacgagcagaagaagatcacagtattcatacactgccgacctcacaacctcta
tcccagcccaccattaccccgcatggtgccgccaccccaacaaatggtaatcagatggac
gctgagaccccaatggacatgagcgttgccctctccgatgctctaacggagtcaagcctg
gccatggaccccacgccgacaccacagtcaacccccttttcagtcgacgtttcctacatg
gagagcctcctccattcacatttcactcaggacagtagtcaaggacctctgtattaa

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