Anoplopoma fimbria (sablefish): 129094523
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Entry
129094523 CDS
T09102
Symbol
lrrc8c
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129094523 (lrrc8c)
Ion channels [BR:
afb04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
129094523 (lrrc8c)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_5
LRR_LRWD1
TEX29
LRR_6
Motif
Other DBs
NCBI-GeneID:
129094523
NCBI-ProteinID:
XP_054458705
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Position
8:complement(1159574..1169055)
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AA seq
795 aa
AA seq
DB search
MIPVMEFRQFSEQQPAFRVLKPWWDVFTDYLSVVMLMIGVFGCTLQVMQDKIICLPLRVS
SLSVNTSEAESKSLLHLQSNISAAPREMRGLKTDLDLQQYSFINQMCYEKALHWYAKYFP
YLVLIHTLVFMVCSNFWFKFPGSSSKIEHFISMLGKCFDSPWTTRALSEVSGENPEEKED
TKTAISRSNITLSPGEGSLEKTQSLRSIPEKLVVDKPSASALDKKEGEQAKALFEKVKKF
RLHVEEGDILYLMYVRQTVFKVFKFLLIIAYNSSLVNKVRNRVRCEVEIQDMTGYKDFEC
NHTMAHLFSKLSYCYLCLVAVYGLTSLYTSYWLFYRSLKEYSFEYVRQETGINDIPDVKN
DFAFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNHEWTAEKLRQRLQTNGNNRLEL
QLFMLPGLPDPVFELTELQSLKLEIINNVTIPASISQLEDLQELSLYQCSLKLHTTATSF
LKENLKVLRVKFDDNRELPHWMYGLRNLEELYLTGSLCPDVSKNIVLESLREMKCLKTLS
LKSNLTKIPQSIVDVSSHLQRLYFHNDGSKLVMLNNLKKMTNLIELELVRCDLERIPHAI
FSLTNLQELDLKENNLHSIEEIISFQHLRKLICLKLWYNGIMYIPEHIKKLGSLERLYFS
HNKIEILPSHLFLCNKLRYLDLSNNDIRFIPPEIGVLQSLQYFSVTCNKIENLPDELFFC
KKLKTLKLGKNSLYILSPKISYLALLTYLDLKCNHFETLPQELGCCRALKRSGLIVEEPL
FETLPSDVKDQMKAE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtgatggaattccggcagttctctgaacagcagccagcgttcagagtcctg
aagccgtggtgggatgtgttcactgactacctgtctgtagtcatgctcatgattggtgtc
ttcggatgcactcttcaggtaatgcaagataaaatcatatgccttcctctgagagtctcg
tcgctctcggtgaacacaagtgaagcggaatcgaagtcactgttacacctgcaatccaat
atttcagccgcaccaagggaaatgagaggtctgaaaaccgatctggatcttcaacagtac
agtttcatcaatcagatgtgttacgagaaggctctgcactggtatgccaagtacttccct
tatttggttcttatacacactctggttttcatggtgtgtagcaacttctggttcaaattc
cccggctcaagctctaaaatagagcatttcatctccatgcttggcaagtgtttcgactct
ccttggaccacacgagctttgtcggaggtgtcgggagaaaatcctgaggaaaaggaagat
acaaagacggccatttctaggtctaacatcactttgtctcctggagaaggcagtctggag
aagacacagtccctccggtcgatcccggagaagctggtggtggacaagccatcagcaagc
gctcttgacaaaaaagagggtgaacaagccaaagctctttttgaaaaggtgaagaagttc
cgtttgcacgttgaggaaggggacatcctctatcttatgtacgttcgacagacagtgttc
aaggtgttcaaattcctcctgatcattgcgtataatagttcccttgtgaataaagtgcgg
aatagagtgcgttgcgaagttgagatccaggatatgacgggctataaagactttgaatgt
aaccacacaatggctcatctgttttctaaactgtcctactgttacctgtgtttggtggcc
gtctatggcttgacgagcctttacacctcttactggctgttttaccgctcactgaaagag
tactcctttgagtatgtgcgacaggaaacaggcatcaacgacatcccagacgtcaagaac
gactttgctttcatgttgcacatgattgatcagtatgaccccctgtattcaaaacggttt
gccgtttttctatccgaggtcagtgagaacaaactgaagcagctcaacctcaaccatgag
tggaccgcggagaaattgcgtcagaggctgcagactaacggcaacaacagacttgaactt
cagctcttcatgctccctgggttacccgaccctgtctttgaactgacggagctccagtca
ctcaagctggagatcatcaacaatgtcaccatccctgcctccatctcgcagctggaagac
ctgcaggagctgtctctataccaatgctctttaaagttgcacacaacagctacctccttc
ctcaaagagaacctgaaagtgcttcgcgtgaaattcgatgataacagggaacttccacac
tggatgtatggcctgcgcaacctagaggagctctatctgaccgggtctctatgtcctgat
gtctccaaaaatatagttcttgagtcgctgcgggagatgaagtgtttgaaaactctctcg
ctcaagagtaatttgacaaagataccccagtccatagtggatgtctccagccatctgcag
cggctgtacttccacaacgatggctctaaactggtgatgctcaacaacctgaaaaagatg
accaacctgatcgagctggagctggtacgatgtgatctggaacgcatcccacacgcgatc
ttcagcctaacgaatctgcaagagcttgaccttaaagagaataaccttcactcaatagag
gagatcatcagcttccaacatcttcgaaaactcatttgcctcaagctttggtacaatggc
atcatgtatatcccagagcacatcaagaagctcggcagcctagagcgcctctacttcagc
cacaacaagatcgagatattgccctcgcacctgttcttgtgcaacaagctgcgctacctg
gacctgtccaacaatgacatccggttcatccctccagagatcggagtccttcagagtcta
cagtatttctctgtcacctgtaacaaaatcgaaaatctaccagatgagctgttcttttgc
aaaaagctcaaaacgctaaagcttggcaagaactccctgtacatactctcgccaaagatt
tcctacctagctctactgacatacttggacctcaaatgcaaccactttgagactctgcca
caagagctcggttgctgtcgagctttgaagcgcagtggccttatagtggaagagccactg
tttgaaactctgccttctgatgtcaaggaccaaatgaaggctgagtga
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