KEGG   Anoplopoma fimbria (sablefish): 129094530
Entry
129094530         CDS       T09102                                 
Symbol
cth
Name
(RefSeq) cystathionine gamma-lyase
  KO
K01758  cystathionine gamma-lyase [EC:4.4.1.1]
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb00260  Glycine, serine and threonine metabolism
afb00270  Cysteine and methionine metabolism
afb00450  Selenocompound metabolism
afb00670  One carbon pool by folate
afb01100  Metabolic pathways
afb01230  Biosynthesis of amino acids
Module
afb_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:afb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    129094530 (cth)
   00270 Cysteine and methionine metabolism
    129094530 (cth)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    129094530 (cth)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    129094530 (cth)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129094530 (cth)
Enzymes [BR:afb01000]
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.1  cystathionine gamma-lyase
     129094530 (cth)
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   129094530 (cth)
SSDB
Motif
Pfam: Cys_Met_Meta_PP Aminotran_1_2 Met_gamma_lyase Aminotran_5 DegT_DnrJ_EryC1 Beta_elim_lyase
Other DBs
NCBI-GeneID: 129094530
NCBI-ProteinID: XP_054458715
LinkDB
Position
8:16862119..16872929
AA seq 409 aa
MDQNHKRDEQSDLFAGFSAAYKSFATEAIHIGQEPEQWKSMAVVPPISLSTTFKQLEPGN
HVGYEYSRSGNPTRNCLEKAVAALDGGKYCIAVASGLAATVTITHLLKNGDGIVCMDDVY
GGTNRYFQRIAAEVGLEVSFADCTKPELLKAALKANTKLVWIETPTNPTMKVVDIKVCSE
VVHEHNKDTVVVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLASMNRDDLY
ERLKFLQNALGCVPSPFDCFLVNRGLKTLHLRMERHFKNAMAAAKFLEADPRVERVLFPG
LPSHPQHEVMKRQCTGCPGMITFYIKGKLEHANAFLSNLKLFAIAESLGGYESLAEHPAI
MTHASVPEKERIVLGISDTLIRLSVGLEDEEDIIEDLKQALAAAHPKTK
NT seq 1230 nt   +upstreamnt  +downstreamnt
atggatcaaaatcacaaacgagacgagcagagcgatttgtttgccggcttcagtgcggcg
tacaaatcgttcgccacagaggcgattcatatcggccaggaaccggagcaatggaaatca
atggctgtagttccgccgatttctctctctaccacgttcaagcagctcgaaccaggaaac
catgtcggctacgaatacagccggagtggaaaccctacaagaaactgtcttgagaaggct
gtggctgctttggatgggggaaagtattgcattgctgttgcctctgggctggcagccacc
gttaccatcacccacttgctcaagaatggtgatggaatcgtctgcatggacgacgtgtac
ggaggcacaaaccgctacttccaaagaattgcagctgaagttggtctggaggtgtctttt
gccgactgtaccaaaccagagctgctgaaggctgctctgaaggccaacaccaaactggtg
tggattgagacccccaccaaccccacgatgaaggttgttgacatcaaggtctgttctgag
gtggtccatgaacacaacaaagacacagtggtggttgtggacaataccttcatgtctgcc
tacttccagcgccccttggctttgggagctgatatctgcatgtattccgctaccaaatac
atgaacggtcacagtgacgtggtaatgggtctggcctctatgaaccgggatgatctgtat
gagcgactgaagtttctgcaaaatgcactgggctgtgtaccgtctccctttgactgcttc
ctggttaaccgaggactgaagacgctacacctgcggatggagcgtcatttcaagaacgct
atggctgccgcaaagtttctggaggcagatcccagggtggagcgggtccttttcccaggc
cttccctctcaccctcagcatgaagtgatgaagagacagtgcaccggatgtccggggatg
atcaccttctacattaaggggaaactcgagcacgccaacgccttcctcagtaacctcaaa
ttatttgcgatagctgagagtcttggtggttatgaaagtttagcggaacatccggcgatt
atgacccatgcatcagtgccagaaaaagagaggattgtcctggggatcagtgacacactc
atccgactctctgtgggcctggaggatgaggaagacatcatcgaagacctcaaacaagcg
ctggctgctgctcacccaaagaccaagtga

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