Anoplopoma fimbria (sablefish): 129094581
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Entry
129094581 CDS
T09102
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00310
Lysine degradation
afb00514
Other types of O-glycan biosynthesis
afb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129094581 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
129094581 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
afb01003
]
129094581 (colgalt2b)
Enzymes [BR:
afb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
129094581 (colgalt2b)
Glycosyltransferases [BR:
afb01003
]
O-Glycan biosynthesis
O-linked Gal type
129094581 (colgalt2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
129094581
NCBI-ProteinID:
XP_054458789
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Position
8:complement(21756296..21784765)
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AA seq
617 aa
AA seq
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MRAVWAVGVGVLWALLCAALPGGGSSEPATLVAQEPFKPESILLKPKVMIAIVARNAAHS
LPHYLGCIERLEYPKERIAIWAATDHNVDNTTAMLREWLKQAQSVYHYVEWRPMDEPKSY
TDEWGPKHWPPSRFNHAMKLRQAALKAARERWADYILFVDSDNLLTNPRVLNLMMAENLT
LAAPMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCYTVPMVHSTFLIDLRRES
SRDLAFYPPHPDYSWAFDDIMVFAFSARQAGVQMYVCNREHYGLLPVPLKAQQSVEEESE
SFIHTITEALIDHDIEPSEHLYYPPSPQDTIGFDEIYLINLKRRLDRRTRMLKSMSSLGL
HATMMEAVDGKALNSSQLQALGIEMLPGYKDPYSGRVLTRGEIGCFLSHHSIWTQVLERG
LKSVLLLEDDVRFEPRFKRRLQAIMDDIDKTQLDWDLIYVGRKRMQVQQPEQSVDGVNNL
VKADYSYWTLGYALSQQGARKLLAAEPFKRMLPVDEFLPIMFNKHPNTQHMSHFEKRDLK
AFSVEPLLIYPTHYTGEPGYISDTETSTIWDDEAVATDWDRQHARKTAQQGNIQPVAQNS
VSGDSPPPAARASRDEL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctgtctgggccgtgggagtcggtgtgctgtgggcgctgctgtgcgccgcgctg
cccggcggaggctcgtcggagccggcgacgctggtggcgcaggagcccttcaagcccgag
tccattctgctgaagccaaaggttatgatcgccatcgtggctcgcaacgcagcgcacagc
ctgccacattacctgggctgcatcgagaggctggagtacccgaaggagcgcatagccatc
tgggcggcgacagaccataatgtggacaacaccactgctatgttgagagaatggctgaaa
caagcccagagcgtctaccactacgtggagtggagaccaatggatgagcccaagtcctac
acagatgagtgggggccgaagcactggccgccttcaaggttcaaccatgcgatgaagctg
agacaggcggcgctgaaggctgccagggaacgatgggcagactacatactgtttgtagac
agtgacaacctgttgaccaacccccgcgtcctcaacctgatgatggctgaaaacttgacc
ctggctgctcccatgttagagtcccgctcgctctactccaacttctggtgtggcatcacc
ccacagggttactacaagagaaccccagactaccagcccatccgggagtggaagcgactc
ggctgctacaccgttcccatggtgcacagcaccttcttaatagacctgcgtcgtgagtcc
agcagggacctggccttctaccctcctcacccggactacagctgggccttcgatgacatc
atggtgtttgctttctcggctcgtcaagcaggtgtgcagatgtacgtgtgtaacagagaa
cattacggactcctgcccgtccctctcaaagctcagcagagtgtggaagaagagagcgag
agtttcatacacaccatcacggaggctttaattgaccacgacatcgagccctctgaacac
ctgtactatccaccctccccacaggacaccataggctttgatgaaatataccttatcaac
ctgaagcgtcggctggacagaaggaccaggatgttgaaatcaatgtcctcgctgggtcta
catgccaccatgatggaagcagtggacggaaaggctctcaattcgtcccagctgcaggct
ctaggaatagagatgctgccgggctacaaggacccttactcaggccgagtactgaccaga
ggggagatcggttgcttcctcagccatcactccatatggacacaggtgttggagcgaggt
ctcaagagtgttcttctcttagaggacgacgttcggtttgaacccaggtttaaacgacgg
ctccaggccataatggatgacatagacaaaacccagctggactgggacctcatctacgtc
gggcgtaagcgcatgcaggtgcagcagccggagcagtccgtggacggcgtgaacaacctg
gtcaaagccgactactcctactggacgctcggctacgcgctgtcacagcagggagccagg
aagctgctggctgcagaacctttcaaaaggatgctgcccgtcgacgagttcctgcccatc
atgttcaacaagcacccaaacactcagcacatgtctcactttgagaagcgggacctgaag
gccttctccgtggagccgctgctcatctatcccacccactacaccggagagccgggctac
atcagcgacacggagacctccaccatctgggacgacgaggccgtggccacggactgggac
cggcagcacgcccgcaagacggcccagcagggcaacatccaacccgtggcccagaacagc
gtcagcggagactcgccgccacctgcagctcgagcctcgcgggacgaactctga
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