KEGG   Anoplopoma fimbria (sablefish): 129094593
Entry
129094593         CDS       T09102                                 
Symbol
si:ch211-129c21.1
Name
(RefSeq) semaphorin-4E
  KO
K06521  semaphorin 4
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:afb04090]
    129094593 (si:ch211-129c21.1)
CD molecules [BR:afb04090]
 Proteins
  129094593 (si:ch211-129c21.1)
SSDB
Motif
Pfam: Sema Ig_SEMA-3_4_7A PSI ig Ig_3 Ig_2 I-set V-set_CD47 PSI_integrin
Other DBs
NCBI-GeneID: 129094593
NCBI-ProteinID: XP_054458808
LinkDB
Position
8
AA seq 810 aa
MSLLSALSIICGLMLHVSYSALNTHYCVPRKTVPYRNELKLFREEGIFNYSTMLMRDDLG
VLLLGAREAVYALDINDVSARKAAVYWRVTEEKQRECTYKGKHAEVECRNYIRTLHRVND
TTMYVCGTNAFSPSCDYLTFVNGQLRLEGKPEEGKGKCPFDPFQRYSSLMVGNDLYSATS
INFLGSEPVVLRSSDLALRTEFKSSWLSEPNFVFMDFVGESFGSPGGDDDKVYMFFSENA
MEYDFYRKVAVSRVARVCKGDMGGQRTLQRKWTTFLKARLDCSLPEPSLPPIVQDVFLLK
DEDWRKSVFYAVFTPQSSLSQVSAVCAFKVSAIRDIFNEGKFKTPVAVETSHVKWVMYTG
EVPVPRPGACINNVARNMGMNRSLDLPDKTLQFIRDRPLMDDAVRPLTGGPLLVKRGALL
TRIVVDSVLALDGERYAVMFIGTENGYIQKAVNYAGEMLIIEEIQLYENPVPISILRLLS
SKGQLYAGSAFGVIQMPVSNCSRYDSCVDCILARDPYCAWDLPTEQCSSVHSSSLIMSTA
IQSLKEGDVTRCPPPDPVAAVDLTLVPENNIQLPCQLHSNLAQVLWRFSDQTLHSSNKYY
IYSGGLLILGASELDAGLYTCDSVELINGRAYNRTVAVYHLQLDSGLGEVGGTTPSNEVT
NSSKSIHSLNTAAPGPAPTPRNEEPPSPENQSDTGRVTRLEVAVGLLSLLCLSLMGVILW
IWSQGGARECFKFAKRKGEIEGKRQSAEYMHIPNRTSEIKLLGPEPGRPCSANNNHSTVD
FKGNGEHHFTPMANISSLDGLGYINDESEI
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgtctcttctctcggccctgagcatcatctgtggattgatgctccatgtttcctacagt
gcactcaacactcactattgtgtcccacgaaagacagttccctaccggaacgagctgaag
ttgttcagggaagaggggatctttaactactccactatgctgatgagagatgacctgggt
gttttgctgctgggggcccgagaggccgtatacgctctggatatcaacgacgtctctgcc
agaaaggctgcggtgtattggcgggtcaccgaggagaagcagagggagtgcacgtacaaa
ggaaaacatgctgaggtggaatgccgtaactacatccgaaccctgcacagagtgaatgac
actacgatgtatgtgtgcggcacaaatgctttcagcccctcctgtgattatctgactttt
gtaaatggacagctgaggctggagggaaagccggaggagggaaaggggaagtgtcctttt
gatcccttccagagatactcctccctcatggtcggaaacgacctgtactctgctacatcc
atcaacttcttgggctctgagccggtggttctgcgcagttccgacttggctctacgcact
gagtttaagagctcctggctcagtgagccaaactttgtcttcatggactttgtgggtgag
agttttggtagtcctggcggtgatgatgataaggtgtacatgttcttcagtgagaatgcc
atggagtacgacttctacaggaaagttgcagtgtcccgagtggcccgagtctgcaagggg
gatatgggcggccagcggacactgcagaggaaatggacgacgttcctgaaagcccgtctg
gattgttccctccctgaacccagcctgccccccattgtccaggatgtcttcctgctgaag
gacgaggactggaggaagagcgtcttctacgctgtcttcactccgcagtcgagcttgtcc
caggtttctgcagtatgtgcatttaaagtgtctgccattcgggacatttttaacgagggc
aagtttaagacacctgtcgccgtggagacgtcccacgtcaagtgggtgatgtacactgga
gaggtgccggtcccaagaccaggagcgtgtatcaataacgtggcacgtaacatggggatg
aatcgctctctggaccttcctgacaaaaccctccagttcatcagggaccgtcccctcatg
gacgatgccgttcgcccgctgacaggaggcccgctgctggtcaagaggggagctttgctg
actcggattgtagtggacagtgtgttggcgctggacggagagagatatgcagtcatgttc
atcggcactgaaaacggttacattcagaaggctgtcaactacgcaggagagatgctcatc
attgaggaaattcagctgtatgaaaaccccgtgcctataagcatcctgcgcctcttgtcc
agcaagggccaactgtatgcaggttcagcgtttggtgtcatccagatgccggtcagtaac
tgcagccgctatgactcctgtgtggactgcatcctggccagggatccgtactgcgcctgg
gacctccccaccgagcagtgctcctcagtccacagctcgtcactcatcatgagtactgca
atacagagtctgaaggaaggagacgtcacgcgatgtcctccgccagatccagtagcagct
gtggacttaaccctcgttccagagaacaacatccagctgccttgccagctccactccaac
ttggctcaggtcctgtggcggttctccgaccaaacacttcactccagcaacaaatactac
atctacagcggggggctcctcatcctgggggcctctgaattggacgccggcctctacacg
tgtgactctgtggagctgatcaacgggagggcctacaaccggacagtggcggtttatcac
ctgcagctcgactccggcctaggagaggttggcgggacgactcccagcaacgaggtgaca
aattcctcaaaatctattcacagtctgaacactgccgctccggggccggcgccaaccccg
cgtaacgaggaaccgccgtcccccgagaaccaaagcgacacgggcagggtgacccgcttg
gaggtcgccgtgggtctgctctcgctgctttgtctctccctgatgggcgtcatattatgg
atctggagtcagggtggggcaagggagtgctttaagtttgcgaagcgcaaaggcgaaatc
gaggggaagaggcagtcggctgagtacatgcacatcccgaacagaacttcagagataaag
ctcctggggcccgagcctggaaggccttgcagtgccaataataatcactccaccgttgac
ttcaaagggaacggggagcaccacttcacacctatggccaacatttcaagcctggacggg
ttgggatacataaatgatgagtcagagatttga

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