Anoplopoma fimbria (sablefish): 129094665
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Entry
129094665 CDS
T09102
Symbol
hnrnpm
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein M
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129094665 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129094665 (hnrnpm)
Spliceosome [BR:
afb03041
]
Common components
Common spliceosomal components
hnRNP proteins
129094665 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_MARF1
RBD_DEAH11
Lipoprotein_18
Motif
Other DBs
NCBI-GeneID:
129094665
NCBI-ProteinID:
XP_054458900
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All DBs
Position
8:18318889..18326899
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AA seq
711 aa
AA seq
DB search
MADEQAEKTNVPEQEGPQQQQPPPQQQQPGEVNGKPKHEPNSSRKERPQKRGGGGGRYEP
YGNVNKRYRVFVSNIPYDVKWQALKDLMKEKVGEVTYVEHLMDAEGKSRGCAVVEFRTEE
LMKKAVEKVNKHNLNGRPLKVKEDPDGVIAQREMNKTQGGGXSGGHGGMGGMGGMGGMDR
MNMERMGPGPNGSVVNIPPSLMNNPNIPNEIIHGLQAGRIGMTVFVANLDYKVGWKKLKE
VFSMAGMVVRADILEDKDGKSRGMGTVTFDMPIEAVQAVSMFNGQLLFNRVMHVKLDEKS
LPKDFGPPDRAASALPRGLSGIGLGLGPGGQPIDATQLNRGGGGGGGGGGMGNMGPGGMD
GMGFGNMGGRMGGGGGGGGGGGGGSGGGGMDNFGGMNNMDRFGSSGMGRMNEMDRGIGGA
FDREFGRNEMGMSRNNFGDSFERGMGNSLGMDRMSSGMDRMGANMDRMAGMDRMGMERMD
RGSDLERLGSGFDRMGSGMERLGPSMDRLGPGLDRMSSTIDRLGPAGFDRLGPSGLDRMG
SSLDFGAPMGMDRLGNTGLDRMATGFDRIGSTGGLDRFPAGGIDRMGSGMDRMGSGGVGG
QFDRSGEMDRGFVGNTFGGAGGPGTGGSNVRKGCQIFVRNLPFDFNWKMLKDTFNTCGMV
QYADIKMENGKSKGCGVVRFDTPETAERVCRTMNGYRLNGREIDVRIDRNA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgagcaggctgagaagactaacgtgcccgaacaagaaggcccgcagcagcag
cagcctccgccgcagcagcagcagccaggagaagtgaatggtaaacccaaacatgaaccc
aattcaagcaggaaggagaggccccagaagagaggtggaggcggtgggcgctatgaaccc
tatggaaacgtcaacaaaagataccgcgttttcgtcagcaacatcccatacgatgtcaaa
tggcaagctctcaaagacctgatgaaagaaaaagtgggtgaggtaacgtacgtggaacac
ttaatggacgcagaaggcaaatcgaggggttgtgctgttgttgagtttaggactgaagag
cttatgaagaaagcggtggagaaggtcaacaagcacaacctcaatggacgtcccctgaaa
gtgaaagaggaccctgatggtgtgattgctcagagagagatgaacaagactcagggtgga
ggtncatccgggggccatggtggaatgggcggaatgggaggaatgggtggaatggatcgc
atgaacatggaacgtatgggtccaggaccaaatggctccgtagtcaacattcctcctagc
ctgatgaacaaccccaacatccctaacgagatcatacatggtctccaggctggcaggatt
ggcatgactgtctttgtggccaatcttgactacaaagtgggctggaagaagctgaaagag
gttttcagcatggcaggcatggtggtgagggccgacattctggaggacaaggatgggaag
agcagaggcatgggaacagtgacatttgatatgcccattgaagcagtccaagctgtctct
atgtttaatgggcagctgttgttcaacagagtcatgcacgtcaaactggatgagaaatcc
ctgcccaaagattttggtccacctgacagagctgcttctgctcttccccgtggcctgagt
ggtattggtttgggcctgggacctggtggccagcccattgatgctacccagctcaataga
ggaggaggaggaggtggtggcggtggaggaatgggcaacatgggccctggaggaatggat
ggaatgggctttggtaacatgggaggtcgtatgggaggaggaggtggtggtggaggagga
ggaggcggtggcagtggcggaggaggaatggacaactttggaggaatgaacaacatggat
cgttttggttcttccggaatgggcagaatgaacgagatggaccgtgggattggtggtgct
tttgacagggagtttgggcgaaatgaaatgggcatgtctcgcaataattttggtgactcc
tttgaaagaggaatgggaaactctctgggtatggaccgcatgagctctggaatggaccgc
atgggagccaacatggaccgcatggcagggatggatcggatgggcatggagaggatggac
cgcgggtctgacctggagaggctcggttctggtttcgaccggatgggctcagggatggaa
cgtctggggcccagtatggacaggcttggaccaggtctggaccgtatgagctccaccatc
gaccgcctcggcccagctgggttcgatcgcctaggcccgtctggtttggatcgcatggga
tctagcctggacttcggcgccccaatgggtatggatcgcttgggcaacaccgggcttgac
cgcatggccaccgggttcgaccgcataggctccactggaggacttgaccgcttccccgcc
ggtggcatcgaccgcatgggctctggcatggatcggatggggtctggaggagttggtggt
cagtttgatcgctctggagaaatggatcgtggatttgtcgggaatacctttggaggagcc
ggagggcctggaactggaggaagcaatgtcaggaagggatgccagatctttgtcagaaat
ctgccatttgacttcaactggaagatgctgaaggataccttcaacacatgtggcatggtc
cagtatgctgatatcaagatggagaacggcaagtccaagggctgtggtgtggttcgcttc
gacacccctgaaactgctgagcgtgtctgccggaccatgaatggctatcggctgaacgga
agagaaattgatgtcaggattgatagaaatgcataa
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