Anoplopoma fimbria (sablefish): 129094800
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Entry
129094800 CDS
T09102
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129094800
04121 Ubiquitin system [BR:
afb04121
]
129094800
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129094800
Membrane trafficking [BR:
afb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129094800
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129094800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-Nse
zf-RING_16
C1_2
HypA
zf-RING-like
Tmpp129
Zn_ribbon_6
DUF7560
Motif
Other DBs
NCBI-GeneID:
129094800
NCBI-ProteinID:
XP_054459041
LinkDB
All DBs
Position
8:complement(23129637..23136457)
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AA seq
319 aa
AA seq
DB search
MAEAPPWPSRFFCHRCSAEISPRLPEYTCPRCDSGFIEELLEERSADNGSMSTISSGPQN
QQPFENPDQHLFTFPSGYGQFALGVFDDRFDFGAGLGTEDNRDAENRRERETASRQRYGA
RQPRSRHGSRRQTGRPEGVPTLEGIIQQLVNGIIAPTAMPNIGVGPWGVLHSNPMDYAWG
ANGLDAIITQLLNQFENTGPPPADRDKIKTLPTVQVTEEHVASGLECPVCKEDYSVGESV
RQLPCNHMFHNDCIVPWLEQHDTCPVCRKSLCGQNTATNPPELSGMNFTSSSSSSSASSS
SSTPQSSSSASNENSTDNS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctcctccatggcccagccggttcttctgtcacagatgctccgcagagatt
agccctcgtcttcccgagtatacatgtccaagatgtgactcagggtttattgaggagcta
ctggaggagagaagtgctgacaatggctccatgtcgaccatctccagcgggccccagaac
cagcaaccatttgagaatccggaccagcacttgtttacattcccttctggctacggccag
tttgccctgggtgtctttgacgaccgcttcgacttcggggctggactgggaacggaggat
aacagggatgctgaaaacaggcgggaaagggaaaccgcttcacggcaacgatacggtgcc
aggcaaccaagaagtcggcacggctccaggcgacaaacagggaggccggagggagttcct
actctagagggaatcattcagcaactagtgaatggaataattgcaccaactgcaatgcca
aatattggagttggaccctggggtgttcttcactctaatcctatggattatgcctggggc
gccaatggactagatgcaattataactcagttattaaaccagtttgagaacacgggacct
ccgcctgccgatagggataaaataaaaactcttcctacagtacaagttacagaagagcac
gtcgcctcaggactggaatgtccagtgtgtaaagaagactacagtgtcggagaaagtgtg
aggcagctcccgtgcaatcacatgttccacaatgattgcatagtcccctggctggaacag
catgacacgtgtccagtgtgcaggaaaagcttgtgtggtcagaacacggcaacgaatcct
ccagaactatcagggatgaactttacctcctcttcttcctcctcctcggcctcctcctct
tcctcgacccctcagtcctcaagttcggccagcaatgagaactccactgataactcatag
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