Anoplopoma fimbria (sablefish): 129094821
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Entry
129094821 CDS
T09102
Symbol
cyldl
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04217
Necroptosis
afb04622
RIG-I-like receptor signaling pathway
afb04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
129094821 (cyldl)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129094821 (cyldl)
04625 C-type lectin receptor signaling pathway
129094821 (cyldl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129094821 (cyldl)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129094821 (cyldl)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129094821 (cyldl)
Peptidases and inhibitors [BR:
afb01002
]
Cysteine peptidases
Family C67
129094821 (cyldl)
Ubiquitin system [BR:
afb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129094821 (cyldl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
phiKZ_IP
CEBP_ZZ
Motif
Other DBs
NCBI-GeneID:
129094821
NCBI-ProteinID:
XP_054459070
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All DBs
Position
8:6693921..6702571
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AA seq
761 aa
AA seq
DB search
MTSTSDLYFIVTRKPEDRGLVNAGRICYISESRHRSLKRSYPTKLPVFLMGSRTRLDYEI
ELSYMEQLSAEDAELLQALSEDADRMRWFIEGEALRTALGLAEGTAVTVEEGGDKLRGIV
KYIGRLTDKSYSCPLPGTFFGIELQGEDRGKGNTDGTFQSKTFFSCKKDCGIFATFARVR
PVVPSSLTPSNPEHSQTDQLFSGDRVTCFIGDNIRHGMVLNVQEKDGKHIVRISTDKDEN
GKRGGEVDVPLHLVAKGELPPEPESMDVDTTPVEKDNGFLSLNSVVEVTLGKGTSYGIIR
WIGTLPGCQETMAGLELDEEDGVSDGTFKRERYFDCAPKKALFVKLRSCRPDSRFQSASA
NSTEMMFKQEDLERDAEHCTGILGTVPPVSTEQVHQILIGRMKGIQGHYNSCYMDAALFS
LFSCSSVLDAMLFKSTEPQDAPIQSTLLHDIVNPLRNKGFVEGRHIMKLRQQLQKHGYSH
SFTTDEKDPEEFLTVIMHHILALDPLLKLSAGGKVQDSYCYQIFLDQNHSLVLPTVQQLL
EHSFHTAGLKLAEVPSCLILQMPRFGKKFKMFDKIIPSLELDVTDLLSEGPQQCMLCGDL
AQEECTDCFKDPMFSQTGFKIFCKMCSSQVHSHPQRRSHKPAALVIPKGYSGRSMPHTLI
RDKLELFAVLCIETSHYVSFIKYGPKREDWIFFDSMADRQGERDGFNIPEVHACPEVGMY
LEMSPAELANQAPRDMKGVAKRLFCDAYMYLYQSTSMCLYR
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaacaagcgacctgtacttcatcgtgacacgaaaacctgaagaccgaggactc
gtcaatgctggacgcatatgctacatatctgaaagcagacacagatcattgaaaagatca
tatcccacaaagttgcccgtcttcctcatgggctcacggacaaggttagattatgaaata
gagttgagttacatggagcagctgagtgcagaggacgccgagctgctgcaggccctgtcc
gaggacgcagacaggatgaggtggttcatcgagggagaggctctgcggacagcactggga
ctcgctgagggcactgcggtgaccgtggaggaaggaggagacaagctcagaggcatcgtg
aaatacattggaagacttacagacaaatcatattcctgtcctttgccaggcacgttcttt
ggcattgaactacagggagaagaccgggggaaggggaatactgatgggaccttccagagt
aaaacctttttctcctgtaagaaagattgtggcatttttgccacgttcgccagagtcagg
cctgtggttcccagctccttgaccccctccaaccctgagcactctcaaacagaccagctg
ttttcaggggatagagtcacgtgcttcatcggcgataacattcggcatggaatggtgttg
aacgtgcaggaaaaggacggaaaacatattgtccggatctccacggacaaagatgagaat
ggaaagagagggggcgaagttgacgttccactacatttggttgctaagggggagttgccc
ccagagccagagagcatggatgttgatacaacaccagtggaaaaagacaatggttttctg
agcttgaactctgtggtggaggtgaccttgggtaagggcacttcatatggaatcatccgc
tggatcggcactctgcctggttgtcaggaaaccatggccggcctagagctggacgaagaa
gatggagtgagtgacggcacgttcaaaagagagcgttactttgattgtgccccaaagaaa
gctctgtttgtgaagctcagatcctgccgccctgactcgcgattccagagcgcatcagcc
aattccaccgagatgatgttcaagcaagaagacttggagagagatgcagagcactgtaca
gggattctggggactgttcctcctgtcagcacggagcaggtccaccagattttgattgga
cgaatgaaggggatccaaggccactacaactcctgctacatggacgctgccctcttcagc
ttgttttcctgctcctctgtgttggacgccatgctgtttaaatcaacagaacctcaagat
gccccgattcagagcacactgctccacgacattgttaatcccctccgcaataagggcttt
gtggaagggcggcacatcatgaagctccggcagcagctacagaaacacggctacagtcac
tccttcaccaccgatgagaaggatccggaggagtttcttactgtcatcatgcaccacatt
cttgcactggatcctcttctcaaactgtcagcaggtggtaaagtgcaggatagttactgc
tatcagatcttcttggaccagaaccacagcctggttctgcctacagtccagcagctcctg
gagcattccttccacactgcaggactcaagctggcagaggttccatcctgcctcatcctc
cagatgcctcgctttgggaagaaattcaagatgtttgacaagatcattccctctctggag
ctggacgtcaccgacctcctctctgaaggtcctcagcagtgcatgctgtgtggagacttg
gcccaggaagagtgcaccgactgttttaaagatcccatgttcagccagacgggattcaaa
atcttctgcaagatgtgttcatctcaggtgcactcccatcctcaacgccggtcccataaa
ccagctgctctggtcatccccaagggttactcgggtcgcagcatgcctcacactcttatc
agagacaagctggagctgttcgctgtgctctgcatcgagacgagccactacgtgtccttc
atcaaatatggaccaaaacgcgaagactggatcttctttgacagcatggcagacagacaa
ggagagagagacggattcaacatcccggaggttcacgcctgccctgaggttggcatgtac
ctggaaatgtctcccgcggaactggccaatcaggcgcctcgagacatgaaaggtgtggcc
aaacgtctcttttgtgacgcctacatgtacctgtatcagagcacgagcatgtgtctctat
cgctga
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