Anoplopoma fimbria (sablefish): 129094862
Help
Entry
129094862 CDS
T09102
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03018
RNA degradation
afb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129094862 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
129094862 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129094862 (lsm4)
03041 Spliceosome [BR:
afb03041
]
129094862 (lsm4)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129094862 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
129094862 (lsm4)
Spliceosome [BR:
afb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129094862 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
129094862
NCBI-ProteinID:
XP_054459124
LinkDB
All DBs
Position
8:13539262..13542548
Genome browser
AA seq
155 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGPQQNKQQGKGRGGGGGGGAGAGRGLFGG
RGRGMTGPGRGQQQQLQLQQQDKKQGKPQGMKNQH
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcttccactatctctgctgaagactgcccagaaccatcccatgctggtggagctgaag
aacggggagacgtacaacggtcacctggtgagctgtgacaactggatgaacatcaacctg
agagaagtcatttgcacctcaagggatggagataagttctggaggatgcccgagtgctac
atcagaggaagtaccatcaagtacctgcgaatccccgatgagatcatcgacatggtgaag
gaggaggtggtgtcgaagggccgtggacgtggaggcccccagcagaacaaacagcagggc
aaaggaagaggaggaggaggaggaggaggagccggagccggccgaggtctgtttggcggc
cgtggcagaggaatgactggtcctggtcggggccagcagcagcagctgcagctgcagcag
caggataagaaacagggcaaacctcagggaatgaagaaccagcactga
DBGET
integrated database retrieval system
