Anoplopoma fimbria (sablefish): 129094868
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Entry
129094868 CDS
T09102
Symbol
ap3d1
Name
(RefSeq) AP-3 complex subunit delta-1 isoform X1
KO
K12396
AP-3 complex subunit delta
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
129094868 (ap3d1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129094868 (ap3d1)
Membrane trafficking [BR:
afb04131
]
Endosome - Lysosome transport
Others
AP-3 complex
129094868 (ap3d1)
Endosome - Golgi transport
129094868 (ap3d1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Mu_AP3
Cnd1
HEAT
HEAT_2
INTS1_R4
PDS5
RTP1_C1
RasGEF_N_2
SR-25
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
129094868
NCBI-ProteinID:
XP_054459134
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All DBs
Position
8
Genome browser
AA seq
1267 aa
AA seq
DB search
MALKIVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISTCIDEIKQELKQDNIAVKANAVC
KLTYLQMLGYDVSWAAFNIVEVMSSSKFTYKRIGYLAASQCFHESTDVIMLTTNQIRKDL
SSPNQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
LDLLYGMVSKKNLMEIVKKLMLHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
ILVELTRLEGTRHGHLIASQMLDVAIRVKAIRVFAVAQMATLLDNAHLMTGNVQRKGICE
VLYAAAWICGEFSEHLENPMQTLEAMLRPKVATLPGHIQAVYVQNAAKLFATVLKNQEGN
TDCTKAQETSQLMIERLPLFVQSANLEVQERASCILQLVKYIQKLQQKDVEVAEEVIALF
AGELNPVAPKAQKKVPVPEGLDLDAWINEPPSESESEDEQPKAIFAKEEPKHSRPRHTEV
DEKELAKRREARKQEQANNPFYIKASPSSQKVYQEAPGVEHIPVVQIDLSVPLKVPGLPM
SDQYVKLEEERRQKDRAEKKKKDKKKRKEKRSGRGKKHDSGPESEEDITPAHMVDIVTEE
MPENALPSDDDDKDPNDPHKALDIDLDNLLEMAGRRPLADSEKLPVRSHRAAEVLKSPAE
DGDAESAAAQEPKKKISKEKKEKKKDKDRDRKKSKDDKKKKKKHKHEEKGEDLLGGQEDE
PVVQSEETSEVAAPPASNTAEVSDLDFWLSNAPVPSNAQEAATLATEAEAAPVPEAASGT
APDSEPDEPKDNEPEETDKKSSKHKKKKQKKEKEDKEKKKKKKHHHHHHHSDGGGEESVQ
NGTVEEEEPLPPMSNYCLLAENSYIKMENDIQGNLQDGSQVVVSVIFENKCERFLKSMEF
NVLDSLNSKLQRPEGSGPHDGLTVPFQLPPGVSNEARFVFAVQSIVMPQKLKGTLTFILK
NEDSSTHEKLDFKLHFTCSSYLITTPCYSDAFAKLLESGDLKCSSLKLEGVHMPFHHLLA
RICFHHHFSVVERIDSCASMYSRSIQGHHVCLLVKTSGQTVSIDAKCDEPALLGNVLDEI
KQTFSQC
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaagatcgtcaaagggagcatcgatcgaatgttcgataagaaccttcaggat
ttagtacgtggcatccggaaccacaaggaggacgaggccaagtacatctccacatgcatc
gatgagatcaaacaggagctcaagcaggacaacatcgctgtcaaagccaatgccgtgtgc
aagctcacctaccttcagatgctgggctacgatgtcagctgggccgctttcaatatcgtt
gaagtcatgagctcctccaagttcacatacaagaggattggctacctggcggcctcacag
tgctttcacgagagcactgatgtcatcatgctgacaacaaatcagatccgaaaggatctc
agcagtcccaaccagtatgacacaggtgttgccctaacaggcctctcctgttttgtgacc
cctgacctggctcgggatctggccaatgacatcatgacactgatgtcccacaccaaaccc
tacatcagaaagaaagcggtgctgatcatgtacaaggtgttcctgaagtacccagagtcc
ctgcgacctgctttcccccggctcaaggagaaactggaggacccagacccaggtgtccag
tctgcagcagtaaatgttatctgtgagctggctcggaggaatcccaagaactacttgtct
ctggccccactcttcttcaaactcatgacctcttctactaataactgggttctcattaag
atcatcaagctgttcggtgcactcacaccactggagccacggttggggaagaagctgatc
gaacctctgaccaatttaatccacagtacctctgccatgtctctgctatatgaatgtgtc
aacactgtgattgcagtgttgatttctttgtcctctgggatgcctaaccacagtgctagt
atccagctctgtgtgcagaaactgcgaatcctgatagaagactcggaccagaacttgaag
tacctgggcctgctggccatgtcaaagatactgaagacccaccccaagtcagtgcagtct
cacaaggacctgatcctccagtgtctggatgacaaggacgagtccatccgcctgagagct
ctggacctgctctatggcatggtatccaaaaagaacttgatggagattgtcaagaagctg
atgctgcatgtggacaaagcagaaggaaccacctacagagatgagctgctcaccaagatc
atcgacatctgcagccagagcaactaccagtacatcaccaactttgaatggtacatcagc
atcctggtggagctgacccggttagagggcacccgacacggccacctcattgcctctcag
atgctggatgtggcgatccgggtcaaagccattcgggtctttgctgttgcccagatggcc
actctgctggacaacgcccacctgatgacgggcaacgtgcagcggaagggcatctgtgag
gtgttgtatgcggcagcctggatatgcggtgaattctcagaacacctggagaacccgatg
cagactctagaggccatgctgaggccaaaggtggccaccctaccgggccacatccaggca
gtgtacgtgcagaacgcagccaagctgtttgccaccgtgcttaagaaccaggaggggaac
acggactgcacaaaagcacaggaaaccagccagctgatgatagaaaggctgccgctgttt
gtccagagcgccaacctggaggtgcaggagagggcgtcttgcatcctgcagctggtcaag
tacatccagaaactgcaacagaaggacgtagaagtagcggaggaagtcatcgctctattc
gctggagaactcaaccctgtagcccccaaagcacagaaaaaagtgcctgttcctgaaggt
ctggacttggacgcctggatcaacgagcctccatctgagagcgagtctgaggacgagcag
cccaaggctatttttgccaaggaggaacccaaacactcccgcccccgtcacacagaggtg
gacgagaaagagctggcaaagaggagagaagccagaaagcaggagcaagccaacaacccg
ttctacatcaaggcctccccgtcctctcagaaggtgtaccaggaggccccaggagtggag
cacatcccagtcgtgcagattgacctcagtgtgcctctcaaagtcccaggtctgcctatg
tctgaccagtacgtgaaactggaggaggagcgtcggcagaaggacagagcagagaagaag
aagaaggataagaagaagaggaaagaaaagcgcagcggacgagggaagaaacatgattca
ggccccgagagcgaggaggacatcacgcctgcgcacatggtcgacattgttaccgaggag
atgccagagaatgccttaccgagtgatgatgatgacaaagatcccaatgaccctcacaaa
gccctggacatcgacctggacaacttgttggagatggctgggcgaaggccgctcgccgac
agtgagaagctgccagtcaggtcacatcgtgcagcagaggttctcaaaagcccggctgaa
gatggagacgcagagtctgccgctgcacaggagcccaagaagaagatcagcaaagaaaag
aaagagaagaagaaggacaaagaccgggataggaagaagagcaaagacgataaaaagaag
aagaagaaacacaaacatgaagaaaagggggaggatcttcttgggggtcaggaagacgag
cctgtggtccaatcagaagaaaccagcgaggtggctgcaccgcccgcctccaacactgct
gaggtttcggatctggatttctggctctcaaacgctccagtgccctctaacgcccaggaa
gcagccaccttagcaacagaagcagaagcggcccctgtgcctgaggcagcctctggcacg
gcgccagactccgagcctgatgagcccaaagacaacgagccggaggagactgataagaag
tcctccaaacacaagaagaagaagcagaaaaaggagaaggaggataaggagaagaaaaag
aagaagaagcatcatcaccatcatcaccacagtgacggaggtggagaggagtcggtgcag
aatggcaccgtggaggaggaagagccactgccgccgatgtccaattactgcctgctggct
gagaactcctacatcaagatggaaaatgacatccagggaaacctgcaggatggcagtcag
gtggtggtgtctgttatatttgaaaacaagtgtgaacgcttcctcaaatccatggagttc
aacgtcctggactctctcaactccaagctgcagaggccagaggggtcgggtccacacgat
ggcctcaccgtccccttccaacttccacccggggtgtccaatgaggcgcgatttgtcttc
gccgtgcagagcattgtgatgccacagaaactgaagggaactctcaccttcatactgaag
aatgaggactcctccactcacgagaaactggacttcaaactgcactttacctgctcatcc
tacctaatcactactccctgctacagtgatgcgtttgcaaagctgcttgagtcgggcgac
ctgaagtgcagctctctcaaactggagggagtccacatgcccttccaccacctactggcc
aggatctgcttccaccaccatttttctgttgtggagaggatcgactcctgtgcctccatg
tacagcaggtctatccaaggacaccatgtctgtctgctggtcaaaacttctggtcagaca
gtgtccattgacgctaaatgtgacgagccagcgctgctcgggaatgtgctggatgagatc
aagcagaccttctctcagtgctga
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