Anoplopoma fimbria (sablefish): 129094902
Help
Entry
129094902 CDS
T09102
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb02010
ABC transporters
afb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129094902 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129094902 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129094902 (abca7)
Transporters [BR:
afb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
129094902 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Tim54
Motif
Other DBs
NCBI-GeneID:
129094902
NCBI-ProteinID:
XP_054459181
LinkDB
All DBs
Position
8:complement(13961570..13992864)
Genome browser
AA seq
2388 aa
AA seq
DB search
MGFFRQLSLLLWKNITYRKRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWIQGIICNINNPCFHSPTPGETLGQVGNFDNSILSRLFVDAQTVLSYSGNRR
FSGFQDLMESVQRLGERPGAWPNLPVEEYLRANETFSSFLLTNGSLSSVTVDQLMKARLN
FQVAVAGAQMQLKDLVCNASMLGQFLKVDGGEATMNDLQTQLCDLPADVLQEAERLFLSQ
LDFTKFFTRDRLMANAGDLRVISEAVTSVSQELAVLIDDFSSLSSFADMSTALHLLSPEN
RSALPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGENGTGDTNLERDNNTTP
FCRSLVQGLESNPLSRIVWRGLKPLFIGKLLYTPDTPAVQQVMKEVNKTFEDMRILQELN
AAWMEVGPQIKNYMESSVEIQLLQDLLRRPEVAVLVNLRLENTSWTASRIARFLSTPSPD
APRKPGAPPTWLDIYNNLNHTITTLAQVTECFSLNKLEGLETEGQMIDRALELLEDREFW
AGVVFLLPNSSSSDLPPHVTYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGF
VYVQDLVERAVSRMLTGVQQTTGIYIQQMPYPCYVDDVFIRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLGTGTLWLSWFISSIVPFLVSAGLLIALLKWGDILPYS
DPTVVFFFLTAFATATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDRLNT
TYRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLNSSPMEGDSYSFSTSIWMLYVDAF
IYATVAWYIEAVFPGEYGIPRPWYFIFQLNYWGGIPLEAGMPIPPAPTEQDEDHIEPEPT
DLILGVSIRNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGLDIRHDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGSLKGLSDAEVKAELD
TLLEDVGLVHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSCLGSGYYLTVVKRE
GLDTSTPSSTSICTSTSISNNKLPTLKDSESSMSEDTGLGSEESGSYWAALLSLAQQHIP
GARLVEESGREAVVNLPQTAAKDSSLGVFLTELDQRLTELGISSYGLSDSTLEEIFLRVA
DETGVDAEPELQAGSPSRQQPSAGQRAEGQHVEEPETGRKRLRKQEPQETDLLSGDGRGG
IPLTGWWLTWQQLRALFIKRWLYARRSRRGFFAQIVLPAVFVLVALLFSLIVPPFGKYPA
LQLQPWMYGQQYTFFSNDAPGNPAMENLLEALLDQPGFGTKCMEKEEEDNSTSPQCEGEQ
GVTFMRPQVSYSTWQMFSRGNWSKDKPSPDCKCSTEDVRRMLPDCPQGAGGMPPPQTKRL
TGDILQNLTSFNISDYLVKTYPQILKKSLKTKKWVNEFRYGGFSLGGSSTQTLSQVHHVQ
DSIVAIRTRYGVQQNSSLDHLLNRLPDFLGGLNSQNNVKVWYNNKGWHAMVSFVNVMNNG
LLRASLPPGPERKRHGITAYNHPLNLTKEQLTEIAMMTTSVDVLVSICVIFAMSFVPASF
ILFLIEERVSKAKHLQFVSGVKPILYWLANFTWDMLNYTVPATMVVLIFICFQQQSYVSE
TNLPALVLLLLLYGWSITPLMYPASFVFSVPSTAYVVLTSINLFIGINGSIATFVLELFV
DEHLNEVNRILKKVFLIFPHFCLGRGLIDMAKNQAMADAFARLGTKQTLNPLQWDTVGKN
LFAMAVEGVIFFIFTILLQYKFFIRNRSWWGEPELPPLGPEDEDVNKERERVKSGKAQSD
ILSMIDLSKVYKSGRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTGITCGEA
FIKDHSVQTEMERVHQLMGYCPQFDAINDLLTGREHLELYARLRGVPEESVTKVAQWGVK
KLGLTQYAEREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSV
TKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLADTKS
DLDSCPISTHMKSSFPSIELKEHHQSVLQYQLPSHACCLARVFEVLANNYEELGVIDFSV
SQTTLDQVFVNFAKEQTDDDVLTDVVIGNRTVQTNVTTLHSGINTPTIQPPPPVTPPRPI
KTPEQHDKSCDSKPKESKSKKPKAGKVKSKESKANGEKSNSTPMTRMPQREEKAQRRGRS
GSSGSDSSNVGVLGETSKSSGSKHRAGSSSKNPSALFIVDGNTEDSSL
NT seq
7167 nt
NT seq
+upstream
nt +downstream
nt
atgggattttttcgacagctttccctcctgctctggaagaacatcacataccgcaagaga
aacaagatccagctgatcatcgagctcctatggccgctcttcctcttcgtaatcctcatc
tctgttcggcattcacacccaccctacaaacagagccaatgtcactttccaaacaaagcc
ttgccatcagcaggcaccttgccctggattcagggcattatctgcaacatcaacaaccca
tgcttccacagcccgacaccaggggagacgctgggccaagttggcaactttgacaactcc
atactgtctcgtctcttcgtggacgcccagactgtcttgtcctacagtggaaaccggaga
ttctctggctttcaggatctgatggagagcgtccaaaggctgggagagagacccggagcc
tggccaaatctcccagtagaagaatacctgagagccaatgagacgttctccagcttcctc
ctaaccaatggcagcctgtcgtctgtgactgtggaccagctgatgaaggctcgtctcaat
tttcaggttgctgtggctggagctcagatgcagctgaaggacttggtgtgtaatgcgagc
atgttgggacagtttctgaaggtggacggaggagaagccaccatgaatgatcttcagact
cagctgtgtgacctgccggctgacgtcctgcaggaggctgaacgtctttttctctctcag
ctcgactttaccaagtttttcacgagagaccgtctgatggctaatgctggagacctccgg
gtcatcagtgaggccgtcacctcagtttcccaagagctggctgtcctcatcgatgatttc
tcctctctgtccagctttgcagacatgagcacagctcttcatcttctatctccagaaaat
cgctcagcgttgcccagggagagttttcgtgctttttcgaggatcatgtgcggtcaccct
gaggttggcggtgagcgaatcccatcactgaactggtatgaggacaatgacatcaagtcg
ttcttaggagaaaatggcactggagacacaaacctggaacgtgacaacaacaccactcct
ttctgtcgaagtttggtccaaggtcttgagtccaaccctctgtctcgcattgtgtggaga
ggactaaaacctctatttattggaaaactgctttacacaccagacactcctgcagtacaa
caagtcatgaaagaggtcaacaagactttcgaggacatgcggatccttcaggagctgaat
gcagcctggatggaggtgggaccccaaatcaagaattacatggagagcagtgtggagatt
cagctgctgcaggatttgctgaggcggccagaggttgccgtactggtcaacctgcgccta
gagaacacatcctggacggcctcacgaatcgcacgttttctgtccacaccctcgccagat
gccccaaggaagcccggagcgccgcctacctggctggacatctacaacaacctcaaccac
accatcaccacgctggcacaagtcactgagtgtttctctctgaacaagctggaggggttg
gagacggagggtcagatgattgacagggctttggagctactggaggacagggagttttgg
gcgggtgtggttttcctgctgcccaactcctcgtcctctgacctgccgccccacgtcacc
tacaaaatccgaatggacattgatgatgtgacccggaccaacaaaatcaaggacagattt
tgggatcctggtccagcagccgacccatttaatgatatgcgctacatttggggtggcttt
gtgtacgttcaggacctggtggagagagcagtgagccgcatgctgaccggagttcaacaa
acaaccggcatctacatccagcagatgccctacccctgctatgtggatgatgttttcatc
cgagtgctgaaccgctctctgccactcttcatgacactggcctggatctactcggtggcc
atgatcatcaaaggcgtggtgtatgagaaggaggcgaggctgaaggaaaccatgaggatt
atgggtctgggaacgggaacgctgtggctcagctggttcatcagcagcatcgttcctttc
ctggtctctgcagggctcctgattgctctgctcaagtggggggacatcctgccatacagc
gacccaactgttgtgtttttcttcctgacggcgtttgccactgccaccatcatgcagtgt
tttctcatcagtacattcttctctaaagccaacctggctgctgcatgtggagggctgatc
tacttcgggctttacctgccatatgtactgtgtgtagcttggagagaccgcctcaacacc
acctacagagtcctagctagtttcctttctcctgttgcctttggcttcggctgtgagtat
ttctctcaatatgaagagcaaggcgtgggcatccagtggtacaacctcaactccagtcct
atggaaggagactcatacagctttagtacctctatatggatgctttatgtggacgccttc
atctacgctactgtggcctggtacatcgaagcagtgtttcctggtgaatatgggatcccc
aggccctggtacttcatcttccagctcaactactggggtggaattcccctggaggcaggc
atgccgatccctcccgcacctacagaacaggatgaagatcacattgaaccagaacccact
gacctgatcctgggtgtgagcatcagaaacctggtgaaaatatacaagaagggagccaaa
ctggccgtgaatcacctcaacctgaagttctacgaggggcagatcacctctttcctcggc
cacaatggagccggcaaaaccaccaccatatctgtcctgactggcctgtttccaccaacc
tcgggcaccgtgtacattaaggggctggacatccgtcatgacatggacatcatccggagg
acactgggagtttgtccacaacacaacgtcctgtttgacatactaacagtggaggagcat
gtgtggttttatgggtcgctgaagggtttgtctgatgcagaggtgaaagctgagctggac
actctgctggaagatgtcggcctggtgcataaacgacatgaacagaccaaaaacctctct
ggtggcatgcagaggaagctgtctgtggcaatagcgtttgttggaggctctaaggtggtt
gttctggacgaacccacagccggggttgatccatactcgcgcagagggatctgggatcta
ctgctcaaatatcgcaaagaccggaccatcatcctgtccacccactacatggacgaggca
gagttgctaggtgaccggatcgccatcatctcccaggggaagctgtgttgctgtggctca
ccgctcttcctgaaatcctgccttggatctggctactacctcactgtggtgaaaagagag
ggactggacaccagcactcccagcagcaccagtatctgcacaagcaccagcatcagcaac
aacaagctgcctactctcaaggacagtgagtcgtccatgagtgaagacaccggcctggga
agtgaggagagtggctcatactgggcggcgttgctctccctggcacagcaacacatcccg
ggtgcgaggctggtggaggagtcggggcgcgaggcggtggtcaacttgccgcagacggca
gccaaggacagcagcctgggcgtcttcctgactgaactggatcagaggctgacggagctg
ggcatcagcagctacggtctgtcagacagcacactggaagagatctttttgcgagtggca
gacgaaactggcgtggatgctgaaccagagctgcaggccggatctcccagcaggcagcag
ccgtcagctgggcagagggctgagggacaacatgttgaggaaccagagacaggaaggaaa
aggcttcggaaacaagaacctcaggagacggacctgctgagtggagatggccgaggtggg
atacctctcaccggctggtggctgacctggcagcagctgagggctctcttcatcaaacgc
tggctttatgctcgaaggagccgcagaggcttcttcgctcagattgttctgcctgctgtg
ttcgtgctggtcgcgctgctcttcagcctcatcgtaccgccgtttgggaagtatcccgcc
ctgcagctgcagccctggatgtacggacaacagtacaccttcttcagcaatgacgcacct
gggaacccggcaatggagaacctgctggaagctctgctggaccagccaggttttggtacc
aagtgcatggagaaagaggaggaagacaacagcacgagtcctcagtgtgaaggcgagcag
ggtgtgacgttcatgcggccgcaggtctcctactccacctggcaaatgtttagcagaggc
aactggagcaaagacaaaccgtctcctgattgtaagtgcagcacagaggacgtacgccgg
atgctccccgactgcccgcagggtgccggtggaatgccgcctccacagactaagaggctg
actggagacatcctccaaaatctgacaagttttaacatctctgattacctggtgaaaacc
taccctcagatcctcaagaaaagcctaaaaaccaagaagtgggtgaatgagttccgatac
ggaggtttctctctcgggggcagctccactcagactttatctcaggtccaccacgtccaa
gactcgatcgtggcgatcaggactcgttatggagttcagcagaacagctcgctagatcat
ctgctaaacagactgccggattttctaggaggactgaacagtcaaaacaatgtcaaggtg
tggtacaataacaaagggtggcatgccatggtgtcttttgtgaacgtgatgaacaacggc
ctgctgagagcgagtctgccaccaggtccagagaggaaaagacacggcatcactgcctac
aaccacccgctcaacctcaccaaggaacaactcacagaaatagccatgatgaccacatca
gtagatgttctggtttccatctgcgtgatctttgccatgtcctttgtgccggccagcttt
atcctttttctgattgaggagcgagtcagcaaagccaaacaccttcagtttgtcagcggg
gtaaaaccgatcctttactggctggccaacttcacctgggacatgttgaactacacagtc
ccggccaccatggtggtgctgatcttcatctgtttccagcagcagtcgtacgtctcagag
accaacctgcctgctctcgtcctgctcctcctgctctacgggtggtccatcacccctctg
atgtacccagcgtcttttgtgttcagcgtcccgagcacagcctatgtagtcctgacctct
atcaacctcttcatcggaatcaacggcagcattgccacctttgtactggagctgtttgtt
gacgagcatctgaacgaggtgaacaggatcctgaagaaggtgtttctcatcttccctcat
ttctgcctgggacgaggactcattgacatggccaaaaaccaggccatggcagacgctttc
gcgagactgggcacgaagcagacactgaaccctcttcagtgggacactgtagggaagaac
ctgtttgcgatggcagttgaaggtgttatcttctttatcttcaccatactgctacagtac
aagttcttcattcgcaacaggtcgtggtggggcgagcctgagttgcctccgcttggtcca
gaggatgaggacgtcaacaaggagagagagagggtcaaaagtggcaaagcccaatcagac
atcctctccatgatagacctgagcaaggtctataaatcaggcaggaagccggcggtggat
cgtctctgccttgggattcctcgtggagagtgttttggcctgctgggggtgaacggagca
gggaagacctccacctttcgcatgctgaccggagacacgggcatcacctgtggagaggct
ttcattaaagaccatagtgtgcagacagagatggagcgagtccaccagctgatgggttac
tgtccacagtttgacgccatcaacgacctgctgacaggtcgggaacatctggagctgtac
gcccgcctgaggggagtgcctgaggagtctgtcaccaaggtggcgcagtggggcgtgaag
aagctgggactcacccagtatgctgagcgggaggcaggaggctacagcggaggcaacaaa
agaaaactctccactgccatctccctcatcggggctcctcctgttatattcctggatgag
cccactactggcatggaccccaaagccaaaaggtttctgtggaactgcatcctcagcgtc
accaaagaaggaagagctgtagttctcacctcccacagtatggaggaatgtgaggcgctc
tgcaccagaatggccatcatggtgaatggccgattccagtgtctcggatctgtacaacac
ctgaagaacaggtttggtgacggctacactatcatcctccgcctggcggacaccaaatcc
gacctggactcatgccccatcagcacccatatgaagagctcctttcccagcatcgagctg
aaggagcaccaccagagcgtgctgcagtatcagctgccctcacacgcctgctgcctggct
cgtgtcttcgaagtgctggccaacaactacgaggagctgggcgtcatcgacttctctgtt
tcacagaccaccctggaccaggtatttgtcaactttgccaaagagcagacggatgacgac
gtcctcacagatgtggtcatcggcaacagaacagtacagaccaacgtcactacactgcac
tccgggattaacactcccaccatccaaccaccgccgccagtcacaccccctcgaccaatc
aagactccagagcaacatgacaaatcatgtgacagcaaaccaaaagaaagtaaatcaaaa
aagccaaaagctggcaaggtcaaatccaaagaaagcaaagctaacggagagaaaagcaac
agcactccaatgaccagaatgcctcagcgagaggagaaggctcagaggagaggccggagt
gggagcagtggatcagacagcagtaacgttggagttctgggagaaaccagtaaatccagt
ggctccaaacacagagcagggagctccagtaaaaatccttctgcactctttatagtggat
ggcaacacagaggacagttcactatga
DBGET
integrated database retrieval system
