Anoplopoma fimbria (sablefish): 129094914
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Entry
129094914 CDS
T09102
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129094914 (si:dkey-183n20.15)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129094914 (si:dkey-183n20.15)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129094914 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
zf-RING_2
Prok-RING_4
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
129094914
NCBI-ProteinID:
XP_054459194
LinkDB
All DBs
Position
8:24387649..24393057
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AA seq
258 aa
AA seq
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MHLYHNSQSRPDLLPSEAPPGHGHLGLPRSPVCTPEQTASTSTSRHKESTQPCPSLSRDW
FCPVCLQTSSFPVQTNCGHLFCAPCLIAYWRHGSWLDAISCPLCRQKVSELCNLFNETRS
DRQSKEVLGEITDYNKRYSGAPRRVTDYLCDAPLLLQLLARGLGDIGGLVWLFFFRVALC
CVGTVVSISSPPLDAVSSSANPLETDPSLCGLLGVLDDLVVVILLLICVINVNQQMAPER
GGQSGNTVNSQRVMGSSL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgtaccacaactctcagtccaggccggaccttctcccctctgaagctccaccg
ggtcacggccacctcgggttgcccagatctcctgtttgcacacctgagcagacagcatca
acgtcaacgagccgccacaaggaatccacacagccgtgtccatcactgagcagagactgg
ttttgtccggtctgcttacagacatccagcttcccggtccagaccaactgtggccatttg
ttctgtgctccctgtctgatcgcctactggagacatggatcctggttggatgcaatcagc
tgccctctctgcagacagaaggtcagtgagctgtgtaacctgtttaacgaaacccgatca
gaccgccagtcgaaggaagttctcggggaaatcacagactacaacaaacgttattctgga
gccccgcgaagggtaacagactacctgtgtgacgctccccttctcctgcagctgctggcc
cgaggcctgggcgacatcggaggactggtgtggttgtttttcttcagagtggccctgtgc
tgcgtggggacggtggtgtccatctcctcccctcctctggacgccgtctcctcctcagcg
aatcctctggagacagacccgtccctgtgtgggctgctgggggtcctggatgacctggtg
gtggtcatcctgctcctcatctgtgtcatcaacgtcaaccagcagatggcaccagagaga
ggaggacaatccgggaatactgtgaactctcaaagagtgatggggagttcactgtag
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