KEGG   Anoplopoma fimbria (sablefish): 129094929
Entry
129094929         CDS       T09102                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:afb03009]
    129094929 (wdr18)
Ribosome biogenesis [BR:afb03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    129094929 (wdr18)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 WD40 WDR18_C Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_Gbeta Beta-prop_SCAP WD40_MABP1-WDR62_2nd WDR55 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_WDR75_2nd Beta-prop_Nup120_160 Ge1_WD40 WDR54 Beta-prop_IP5PC_F KNTC1_N
Other DBs
NCBI-GeneID: 129094929
NCBI-ProteinID: XP_054459212
LinkDB
Position
8:complement(29108282..29138009)
AA seq 428 aa
MAAPLEVIVTSDSGSPMWNCTVFDLHSGSSLLSYRGGSSSARTLTLLNGEYLLSAQLGKN
FINMWEIQRKDQLQQKMVCPGLITSLTASPNGVFLTAGVAEAVYLWEVSTGKLLSVLSRH
YQDVTCLKFTDDSSHFVSGGKDNLALVWSLSSVIQLDSSHTPEPRHVLSRHSLPITDLHC
GLMGAQARVATASLDQTVKVWELSSGELLLSVLFDVEIMSVTFDPCEYFLFCGGSDGNIF
QVSLCSQSLSRDKSFQSDNDGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDETVRLWDVQS
KQSIRCLAHKGQVTNAVITAAPANMFLPDSRPAVPLPRFSRHLHASEGEESGEVCVRLGL
YSQEEEQTYLQKADRLNSLMNAVTDKSVFGDGENTKVRVAELEEEVQTLKKVNKDLYDFS
SQLLTKPT
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcggctcctctggaggtaatcgtgaccagtgactccggctccccgatgtggaactgc
accgtgttcgacctgcacagcggctccagcctgctgtcgtaccggggagggagcagctcg
gcccggaccctgaccctcctgaacggggagtacctgctgtccgcacagctgggcaagaac
ttcatcaacatgtgggagatccagaggaaggatcagctgcagcagaagatggtgtgtcca
ggtctcatcacctctctgaccgcttcacctaacggagtcttcctcactgccggagtcgca
gaggctgtttatctgtgggaggtttccacaggtaagctgctgtctgtcctcagtcgtcac
taccaggatgtcacctgtctgaagttcacagatgacagcagccattttgtttctggagga
aaagacaaccttgctctggtgtggagtctgtccagtgtgatccagctggattcaagccac
acccctgaaccgcgtcacgtcctgtctcgtcactctctaccaatcacagacttgcactgt
ggcctgatgggggctcaggccagagtcgcaaccgcctccttagaccaaactgtcaaggtg
tgggagttatcctcaggtgagctgctcctgtccgtcttgtttgacgtggagatcatgtct
gtgacctttgacccctgcgagtacttcctgttctgtggaggcagtgacggaaacattttt
caggtgtctctgtgcagccagagtctcagtcgggacaaatcgttccagtcagacaacgac
gggaaccaggtcttcaaaggacacaggaacttggtgacgtgtctctcggtgtcgatggac
gggactctcctcctctctgggtcacatgatgagacggttcggctctgggacgtccaaagt
aaacagagcatccgctgcctcgcccacaaaggtcaggtgacgaacgccgtcatcacggcg
gctcctgccaacatgtttctgcccgacagcaggcctgccgtccctctgccgcgcttcagc
cgacacctgcacgcctccgagggcgaggagtcgggggaggtgtgtgtccgcctgggactt
tactcacaggaggaggagcagacgtacctgcagaaagctgacaggcttaattctttgatg
aacgctgtgactgacaagtcggtgtttggtgacggagagaacacgaaggttcgagtggcc
gaactcgaagaagaagttcagactctgaagaaagtcaacaaagatctgtacgacttctcc
agccagctgctcaccaagcccacatag

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