Anoplopoma fimbria (sablefish): 129094946
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Entry
129094946 CDS
T09102
Symbol
si:ch73-63e15.2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129094946 (si:ch73-63e15.2)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129094946 (si:ch73-63e15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
129094946
NCBI-ProteinID:
XP_054459232
LinkDB
All DBs
Position
8:23874535..23945600
Genome browser
AA seq
1577 aa
AA seq
DB search
MPTLPSALAMDGENYLHPEGPQLDSSLFSVAPSNMESSIYSPSGSWGSYSQQAEYSIHCP
MQSGNQQYHLNSSTTTTTPDVHMDMYSGFPDVDFSSLNLPRNGDFPQDLSCIDDLSTNSL
FSSPADSLSEYADAQPFISPDNLNTVPTLWDVNTSTTTTTTTPAQSQLELNGTSRFHGLA
SLDDITAIISTPPLGGFQPQRTQTPTEEEEDAEEEETEELGHVDTYAEYRPSKSTIGISH
PDIVVETNTLSSVPPPDITYTLSIPEPTINCGLLSALQLEAIIYACQQHEVILQNNQRAG
FLIGDGAGVGKGRTVAGIILENYLKERKKSLWFSISNDLKFDAERDLKDINAPNIPVHAL
NKIKYGDTATSEGVLFATYSALIGESQAGGQHRTRIKQILDWCKPDFDGVIIFDECHKAK
NATSTKMGKAVLDLQNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRAFEDFLH
AIEKRGVGAMEIVAMDMKVSGMYIARQLSFSGVSFRVEEIGLDSDFKLVYNKAAILWAEA
LQVFMRAADELGLVSRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAQKELQAGKCIVIG
LQSTGESRTREVLDENDGQLDRFVSAAEGVFQSLVTKHFPSEKQRREKAPGNKRKRKPRG
RQPKVPKHTVDSGGVINISDDSSSDSDGMDTDSNSSPDSLLDNDDVIFVNHTSCQTARIE
DMKQGLLNKISVLGKELPLNTLDELIDKFGGPDKVSEMTGRKGRVVRRPDGSVRYESRAE
QGLTIDHINIKEKDRFMGAEKFVAIISEAASSGISLQADKRVKNQRRRVHMTLELPWSAD
RAIQQFGRTHRSNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDL
SKYNFENKYGTKALDKITKAILGHIENKVPPPKGYPAGEALFFRDMKIGMMDVGIFCRES
RFGINTEKDCSITKFLNRILGLEVHKQNYLFQYFTDNFDYLIEKDKKEGKYDMGILDLAP
GNDEIYEEKQETFLTVGNPQDGQVVLYKISVDRGMPWDEAYNRSLKLSSPDEGFYLSLKL
RGNHPCVLLAEQGRGKNLIVYKPNIGKQTHPESLDNLQLRYRKVTPEEAKDSWENQFTFS
FKKCSHANWNGKCKKIEEGQECLQGMRLRQYHMLCGALLRVWKRVSDVVSELTNSSILQI
VRLKTKQHNKQVGIKIPENCVAHVRKVLVQMDEEVKRRRKEREQRQAEERDRKMEHDNKH
LLANLMLNQSLAQKLNQRTQTGSISQLPRPQAQNQSALQQNLPLLSLHRNLSQQRTHNSW
PNNSTNNNNNQGSASNTVSIRSNFSQFYPQPFVFQQLKGVHPNTGVSSKNPLDEILDLTM
GSPSPSPDSTEVGLNLDSLGGHSTAFVEDFNLESLISQTPSNAQHAAHIQQPLLLQHQQQ
QQHLLATNHQDLLDLFDLPLSPQMPTQKASPSSSTSSCSSSTSSTSNNLVPHVHAGLLPA
SSLIPTSSSSSLFSSPSSSSSLFSNSSPRFSSNYLPAQLDSLPLPNGHSAALDAREALNS
MLQGPDRKSVIKYRPPE
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccctcccctcagcgctggccatggacggggagaactacctgcatccagaaggc
cctcagctggacagcagcttgttctctgtggccccctctaacatggagagttcaatatat
tccccctctggttcctggggatcctactctcagcaggctgaatacagcatacactgccct
atgcaatctggaaaccagcaataccacttgaacagcagcactaccaccaccactccggat
gtgcacatggacatgtactcgggattccctgacgtggacttttccagcctcaacctcccc
aggaatggagacttcccccaggacctgtcctgcattgatgacctctccacaaactccctg
ttctcctctccggctgactcactgtcggagtatgctgatgctcagcccttcatcagccca
gacaacctgaacacagtgcccaccctctgggacgtcaacactagtaccaccaccaccacc
accacaccagcacagagccagctcgagctgaatggcaccagcaggtttcatggcttggcc
agtttggatgatataactgctattatcagcaccccacctttaggaggattccagcctcag
agaacacagacgcccacagaggaggaagaggatgctgaggaagaggagacagaggaactg
ggacatgtagacacatatgctgagtacagaccttccaaatccactataggaatttctcat
cctgacatagtggtggagaccaacacgctatccagtgtccctcctcctgacatcacatac
accctgtccatcccagagccaactataaactgtggtctgctgtccgctctgcagctagag
gccatcatctacgcctgccagcaacacgaggttatccttcagaacaaccagagggcaggc
ttcctgatcggagatggagcaggggttggaaagggacgcactgtggcaggaatcatcctg
gagaactaccttaaggaaaggaagaaatcactatggttcagcatatccaatgacctgaaa
tttgatgcagagagagatctcaaagacataaatgcaccgaatattcctgtgcatgcctta
aacaagattaagtatggagacacagctacctcagaaggagtcctgtttgcgacttactct
gcgctgattggagagagccaggcgggagggcagcaccggacgagaatcaaacagatcctg
gactggtgcaagccagactttgacggagttattatttttgacgaatgccacaaagccaag
aatgccacctctacaaagatgggcaaggcagtgcttgacctgcaaaacaagctgccaagg
gccagagtggtgtatgccagtgccacaggtgcctctgagccaaagaacatgatctacatg
agccgcctgggaatctggggtgagggcacgcccttcagggcctttgaggactttctgcac
gccatcgagaagaggggtgtcggcgccatggagatcgttgccatggacatgaaggtgagc
ggcatgtacatcgcccggcagctgagcttctcaggagtgtcgttccgcgtcgaagagatc
ggactggacagtgacttcaaactggtctacaacaaagctgccatactgtgggcggaggcg
ctgcaggtgttcatgcgtgcggccgatgagctgggcctggtcagcaggaagtctctgtgg
gggcagttctggtcgtctcaccagcgcttcttcaaatatctctgtatcgctgccaaggtc
cgctgcctggtggagctggcccaaaaggagctgcaggccggaaagtgcatcgtcatcggg
ctgcagtctaccggagagtcccggaccagagaagtcctggatgagaacgacgggcagctc
gacagatttgtctctgcagcagagggtgtattccagtctcttgtaacgaagcatttccct
tcagagaaacagaggagagagaaagcaccgggaaataagagaaaacggaagcctagaggt
cgccagccgaaggtaccgaagcacaccgtggacagcgggggtgtgatcaacatcagcgat
gacagcagcagtgactcggatggcatggacacggactccaactcctcacctgactccctg
ctagacaatgatgatgtcatctttgtcaaccacactagctgtcagacagccagaatagag
gatatgaagcagggcctcctcaacaaaatatccgtgctgggaaaagaactacctctcaat
accttggacgagctcatcgataagtttggaggaccagataaagtctcagagatgactggt
cgtaagggtcgtgtggtgcggcgtcctgatggcagcgttcgttacgagtcccgggctgag
cagggtctcaccatcgaccacataaacatcaaggagaaagatcgcttcatgggtgcagag
aagtttgttgccatcatctcagaggcggccagctctgggatttcccttcaggcggacaag
cgagtgaaaaaccagcggcgccgggtccacatgaccttggagctgccttggagtgcagac
agagccattcagcaatttggtcgcacccatcggtccaatcaggtgacggccccagagtac
atcttcctcatctcagaattggccggggagagacgttttgcgtccattgtggctaaaaga
ctagagagcctgggtgcgttaacccacggagacagaagagccacagagtccagagacctg
agcaagtacaattttgagaacaagtatggtaccaaggctctagacaagatcaccaaagca
atccttggccacatagaaaacaaggtgccccctcccaaaggctaccctgcaggcgaggcc
ttgttcttcagagacatgaaaattggaatgatggatgtgggcatcttctgtagggagtct
cgctttgggatcaatactgagaaagactgcagcattaccaagttcttaaatcgcatcctg
ggcctggaagtccacaagcagaactatctgttccagtacttcacggacaactttgactac
ctaattgagaaggataagaaggagggcaaatatgacatgggaatcctagatctcgccccg
ggtaacgatgagatctatgaggagaagcaggaaactttcttgacagttggaaatcctcag
gatggacaggttgttctctataagatcagtgtggaccgaggcatgccctgggacgaggcc
tacaacaggtcgctgaagctcagcagtcctgatgagggattctacctgtccctgaagctg
cgaggaaaccacccgtgtgtgctgctagcggagcaaggacgaggcaagaacctcatcgtc
tacaagcccaatattggcaagcagacgcaccccgagagcctggacaacctgcagctacgc
taccggaaggtgaccccagaggaagccaaggacagctgggagaaccagttcaccttctcc
ttcaagaagtgtagccatgccaactggaatgggaagtgcaagaaaatagaggaaggtcag
gagtgtctgcagggcatgcgcctccgtcagtaccacatgttgtgtggcgctctgctgcgt
gtgtggaagcgcgtatccgatgtggtgtctgaactcaccaactccagcatcctgcagatc
gtccgccttaaaaccaaacagcacaacaagcaagtcggtatcaagatcccagagaactgc
gtggcccatgtgcgcaaggtgctggtgcagatggacgaggaggtgaagaggaggcggaag
gagagggagcagcggcaggccgaggagcgcgatcgcaaaatggagcacgacaacaaacac
ctcctggccaatctgatgctcaaccagtccctcgcccagaaactgaaccaaaggacgcaa
actgggagcatctctcagctgccgaggccgcaagcccagaaccagtcggctttacagcag
aacttacccctgttgtccttacatagaaacctcagtcagcaaaggacccataacagctgg
cccaacaattccaccaacaacaacaacaaccagggctccgcctccaacacggtcagcatc
cgctccaacttctcccagttttacccccaacccttcgtgtttcaacagctgaagggtgtc
catccgaacaccggcgtgtcttccaagaatcctctggatgagatcttggacctgaccatg
ggctcgccgtccccctccccggacagcacggaggtgggactgaatctggacagcctaggg
ggacactcgactgcgttcgtagaggactttaacctggagtccctgatctctcagactcca
tccaatgcccagcacgctgcacatatacagcagcctcttttgctacagcatcagcagcag
cagcagcatctactggccacaaaccaccaagacttattagatttatttgacttgcccctg
tccccccagatgcccacacagaaagccagcccctcgtcctctacctcttcctgctcttcc
tccacgtcctccacctcgaacaacctggtcccacacgtccacgccggcctcctgcccgcg
tccagcctcatcccgacgtcgtcctcctcgtccctgttctccagcccgtcctcgtcctcc
tctctgttctccaactcctccccccgcttctcttccaactatctccccgcccagttggac
tcgctacctttacccaacggccactccgccgccctcgacgcccgcgaggccctgaacagc
atgctacagggaccggaccgcaagtctgtcattaagtaccggccaccggagtga
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integrated database retrieval system
