Anoplopoma fimbria (sablefish): 129094974
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Entry
129094974 CDS
T09102
Symbol
ccdc50a
Name
(RefSeq) LOW QUALITY PROTEIN: coiled-coil domain-containing protein 50
KO
K25949
coiled-coil domain-containing protein 50
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129094974 (ccdc50a)
Membrane trafficking [BR:
afb04131
]
Autophagy
Other autophagy associated proteins
Others
129094974 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
129094974
NCBI-ProteinID:
XP_054459280
LinkDB
All DBs
Position
8:18018816..18037326
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AA seq
613 aa
AA seq
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MAECNVSIDKNKLPGVKEVCRDFAVLEDHCLAYNLQEQEIESHLASNVNKSRLVQKDLLV
AKKLQEEEDQRAKGETKKQHVDTERQDIEIAQEIQDQLVRQAEQQRLQEEKDAAIARKLQ
EKEMKEERKRQKQLEANFEEEYFEDHGAARRPLDLDKRTPHKSSSPGRHDAYAPLSPRHD
YSPDYSSIEPKRSRYPKQDLAAPNSRSTYPEHYLAAEGGRSRHADPYPEHLLPARGKHGD
RYLDSEPTEYGKARGAGWEDTDRAVRRKDRPARPPPPQSPIERDKAWDRKHDRDRGRDLE
KERHMEKEQRRHVEHDPRGARTRERDGERSRDGGLSGDRQREKDRQKQKDKDRQRARTRS
RERGLEEEPGHSRDRPREGRASWEEQGGDGEREGRDRGRQRVHSGPEDVFDELEEQGGGH
SHPNGETGRIVHRVSGAVISETAYGVSEATKGLTKLDIREQELKDMEVARKLQEEEIKAS
KMHVRTAQVAQDEEIARLLMEQEKKEYRKNRERDNEREREKEKERLALEKMPMERRRPEG
DYRPNSEEVVRPRTRDEYEHQRQRNHNKPARPPQPREHDYENVNSGYGYSDHPXPPRAPT
RPDAACKGAYYRR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatgtaacgttagcatcgacaagaataaactacctggagtgaaagaggtgtgc
agagactttgctgtgctggaggaccactgcctggcctacaacctccaggagcaagaaatt
gaaagccacttggcgtccaacgtcaacaagagccgtctggtgcagaaggacctgctggtg
gccaagaagctgcaggaggaagaggatcagagggccaagggcgagaccaagaaacagcat
gttgacactgaacgtcaagacattgagatcgcccaggagattcaggatcaactggtccga
caggcagagcaacagcggctgcaggaagagaaggatgcggccatagctcgtaaactgcag
gagaaggagatgaaagaggaaaggaagagacagaagcagctggaagctaactttgaggag
gaatactttgaggatcacggagccgcaagaaggcccctagacttggacaaacgcacccct
cacaaatcatcctccccaggccgacatgatgcgtacgctccactgagcccacgtcatgat
tactccccagattatagctcaatagagcccaaaaggagcaggtacccaaagcaggaccta
gctgcacccaacagccgctccacatatcctgagcactacctagctgcagaaggagggcga
agcaggcatgcagacccgtacccagaacacctgttgcccgctagaggcaagcatggagac
agatacctagatagtgagcccacagagtatggcaaagcaaggggcgctgggtgggaggac
acagacagagcggtgaggaggaaggacagaccggccagaccacctccaccacagagcccc
atagagagagacaaggcctgggatagaaaacatgaccgagacaggggcagagacctggag
aaggagaggcatatggaaaaggagcagaggagacatgtggagcacgacccacggggggcg
agaacaagagaaagagacggggaaagatccagagatggaggactgagtggggacagacag
agagagaaagacaggcagaaacagaaagacaaagacagacagcgagcgagaaccaggagc
agggagcgaggacttgaggaggagccggggcacagcagggaccggccgagggagggcagg
gcttcttgggaggagcaagggggtgatggtgagagggaagggagggaccggggccggcaa
cgggtccactccggcccagaagatgtgtttgacgagctggaggagcagggcgggggtcat
tctcaccccaacggagagacaggtcgtattgtgcaccgagtgagtggagcagtaatatca
gaaactgcgtatggagtcagcgaggccaccaagggtttgacaaagcttgatatccgtgag
caggagctgaaggacatggaggtggccaggaaactgcaagaggaggaaatcaaggccagc
aagatgcatgtgcgtacagcgcaagtggctcaggatgaggaaatcgcccgactgttgatg
gaacaagagaagaaggagtacaggaagaatcgagagcgggacaacgagagagagcgggag
aaagagaaggagaggctggccttggagaagatgccaatggagaggaggcggccagaggga
gactaccggccaaactcggaggaagtggtccggcccagaacacgagacgagtatgaacac
cagaggcagaggaaccacaacaagcctgccagacctcctcagccgcgagaacacgactat
gagaatgtgaactctggctacggttactcggaccaccccnccccccctcgcgcccccacc
cgacctgatgctgcttgcaaaggtgcctattacaggcggtga
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