Anoplopoma fimbria (sablefish): 129094981
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Entry
129094981 CDS
T09102
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129094981 (lingo3a)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
129094981 (lingo3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
Ig_2
LRR_9
LRRNT
V-set
LRR_RPS2
Cupin_1
LRR_6
Motif
Other DBs
NCBI-GeneID:
129094981
NCBI-ProteinID:
XP_054459288
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Position
8:22241537..22276412
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AA seq
610 aa
AA seq
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MALSLGQDVVWLLPFLFLLLMITVSPAQGQGCPQRCDCIAKLKTVSCYGKRLSALPDGIP
LDTKILDLSGNKLRWVEHGDLLPYSRLEKLDLSENMISVLEPNSFSSLQNLQSLSLRGNQ
LKLVPMGAFSRLSNLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGL
VGLRELTIERCNLTSVSSQSLSYLHNLVALRLRYLSISTLEDQNFRKLGNLRGLEIDHWP
FLEHISPHSLQGLNLSWLSITHTNITSVPTSALRSLPHLTSLNLSYNPISVLESWALRDL
IRLKELHLVNTNLVVVQPYALGGLRQIRLLNLSTNGLVSLEEGAFQSVNTLETLRLDGNP
LACDCRLLWILQRRKTLNFDSASPMCMTPVEVQGRALNAFSDSALFDHFTCQKPKIRNRK
LQQVTAREGQVVSFICRAEGEPTPSIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVT
DSGTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTL
DLKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQG
GARKFNMKMI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgagcctgggccaggatgtagtctggctcttgcctttcctgttcttgctactg
atgatcacggtgtcacccgcccagggtcaaggatgtccccagcgttgtgactgcatcgca
aaactcaagactgtgtcctgttacggtaaacgcctgtccgcgctgccagacggcatcccg
ctggacaccaagatcctggacctcagtgggaataaacttcgctgggtagagcacggcgac
ctgcttccgtattcacgtctcgaaaagctggacctgagtgaaaacatgatcagtgtcctg
gaacccaattctttttctagtctccagaacctgcagtcgctgtcgctgaggggtaaccag
ttgaaactggtcccaatgggggctttctcacgtctctccaacctaacgtcactggacctc
agtgggaataagattgttattcttttggactttactttccaagacctgaaaagtctgaaa
aacctggaagttggagacaatgatttagtttatatttccaacaaggcctttctgggtctg
gtggggctgagggagctgaccattgagaggtgcaacctgacctctgtgtccagccagtct
ttgtcttacctgcacaacctggtggctctgcggctccgctacctcagtatctccacctta
gaggaccagaacttccgtaagctgggaaacctgaggggcctcgagatcgaccactggccc
tttctggagcacatttcccctcacagcctgcaggggcttaacttatcgtggctgtctatc
actcacactaacatcacctctgtgcccacctctgccctccgcagtctgcctcacctcacc
agcctcaacctctcctacaaccccatctccgtgttggagtcctgggcgcttcgggacctc
atcaggctgaaggagctgcatctggtcaacacaaatctggtggtagttcagccgtacgcg
ctgggtggtctgaggcaaatccgccttcttaacctctccactaacggcctggtgtccctg
gaagagggggcctttcagtccgtcaacactctggagactctgcgtttggatgggaaccct
ctggcctgcgactgccgcttgctttggatcctccagcgccggaagaccctcaatttcgac
agcgcctccccgatgtgcatgacgcccgtggaggtgcagggacgggccctcaacgctttc
tccgactcggctctctttgatcactttacctgccagaagcccaaaatccgcaacaggaaa
ctgcagcaggtcacggcccgcgaggggcaggtcgtgtcgttcatttgcagagcagaaggc
gagccgacgccatcgatattctggatctcgcctcagcgccgccgcatcaccacaaagagc
agcggccgcctgactgtgttaccagagggcacgttagaaatacggtacgcccaggtaaca
gacagtggaacctacatctgcatagccagcaacgccggtgggaatgacacctatttcgcc
acactgacagttagtgggctgccactcgatgcggccctcatggccaaccgcacgtactat
gccggggacctcaatgacacaaatctgaatgacaccagagtcttcttgaagttcactctg
gacctcaagaccatcctcatatccacagctatgggctgtatcatgttcctgggggtggtt
ctcttctgtttcattctgctgtttgtgtggagtcgagggagagggcagcacaagaacaat
ttctcagtggagtattccttcaggaaggtggatggccccgctgccagtggaggacagggt
ggggcacgcaagttcaacatgaaaatgatttga
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