Anoplopoma fimbria (sablefish): 129095021
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Entry
129095021 CDS
T09102
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
afb04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129095021 (gabra5)
04082 Neuroactive ligand signaling
129095021 (gabra5)
04519 Cadherin signaling
129095021 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129095021 (gabra5)
Ion channels [BR:
afb04040
]
Ligand-gated channels
GABA-A
129095021 (gabra5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129095021
NCBI-ProteinID:
XP_054459340
LinkDB
All DBs
Position
8
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AA seq
459 aa
AA seq
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MGDGMCYSSAMRRLWVCVLLLSVTCRLSLSQDVTGTPKEAELNDNITIFTRILDGLLDGY
DNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLPL
NNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDF
PMDAHACPLKFGSYAYPVSEVVYTWTQGAAKSVVVAEEGSRLNQYHLIGQTAGTEDIYTS
RGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAMEAQ
QPKKKDPLALSKKPNNTCPSGVNYTTNLTKDASISTISNSTAVQLKPSETKAPDPKKTYN
SVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatggaatgtgttacagctctgcaatgagacgtctgtgggtctgtgtcttgctt
ttgagcgtcacctgccgtctgagcctctcccaggatgtaacgggaactcccaaagaggcc
gaactgaatgacaacatcaccatcttcacccgcatcctggacggactgctggacgggtat
gacaacagactgcgcccgggactgggagagaaggttacggagatcaaaaccaacatcttt
gtcacaagctttggtccggtctccgacactgaaatggaatacactattgacgtgttcttc
cgtcagagctggaaagatgaacgactttgctttaaaggcccgatggagatgcttcctctg
aataacctcctggccagtaacatctggactccggacaccttcttcctcaacgggaagaaa
tccatcgctcacaatatgaccactccgaacaagctgctgcggctgaaagacgacgggacg
ctgctctacaccatgagactgaccatctcagcagagtgtcccatgcagctggaggacttc
ccgatggacgcccacgcttgtcccctcaaatttggaagctatgcgtatccggtctcggag
gtggtctacacctggactcagggagcagcaaagtcagtggtggtggctgaggaaggctcc
cgactcaaccaataccacctgatcggtcagactgctgggacagaagacatctacaccagc
agaggtcaatacaccgtgatgatggctcacttctacctgaagaggaagatcggatacttt
gtcatccagacctacatgccttgcttcatgactgtcatcctgtcgcaggtttccttttgg
ctcaaccgggagtctgtgccggcacggaccgtctttggtgtgaccaccgtgctcaccatg
accactctaagcatcagtgctcgtaactcgctgcctaaagtggcctacgccaccgccatg
gactggttcatcgccgtctgctacgccttcgtcttctccgcgctcatcgagttcgccacg
gtcaactacttcaccaagaggagctgggcctgggatgggaagaaggcgatggaggcccaa
cagcccaagaagaaggaccctttggctctttctaaaaagccgaacaacacctgtccgtcc
ggcgtgaattacacgaccaacctcacgaaggacgcgtccatctccaccatttccaacagc
acggcggttcagctcaaaccctctgaaaccaaggccccggaccccaaaaagacttacaac
agtgtgagcaagatcgacaagatgtccagaatcgtgttcccggtgctgtttgggaccttc
aacctggtgtactgggccacgtatctcaatagggaaccagtgatcaaaggagctgtttaa
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