Anoplopoma fimbria (sablefish): 129095229
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Entry
129095229 CDS
T09102
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129095229 (tmc5)
03037 Cilium and associated proteins [BR:
afb03037
]
129095229 (tmc5)
Transporters [BR:
afb02000
]
Other transporters
Pores ion channels [TC:
1
]
129095229 (tmc5)
Cilium and associated proteins [BR:
afb03037
]
Other cilia and associated proteins
Stereociliary proteins
129095229 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
129095229
NCBI-ProteinID:
XP_054459565
LinkDB
All DBs
Position
9:complement(28013171..28025023)
Genome browser
AA seq
977 aa
AA seq
DB search
MTSFRNGGLFNPAYHDSETLEIDRSKTHHTNPYARGERPDGQYSTGQISGDEAVGRMPLG
GWHEENLRGSESIPMERISMRLGSPSWQHDLSHSTFQIPPDSQYDRSPSVRLSSATSGNM
TMRWRGITMRRMSLFPSGDPAHVALTEDAIRNEMENEEQDLVKELVALSTRDQIRAIRDL
PMSFDEKKHIRSQVLAFKSSKKSRQFTCFADCSENVSLSFRRFGYSITSARQTLELWQGI
MKEIGGKFGTSVLTYFVFLKWLLMFNIFSFLVNFGFITIPLLVYDPSPNIPANVSFSGLE
ILTGAGYFHYTVMYYGGYSNETLHGLVEYNMQLAYFFTIAVYMVLCGIALIYSMASSFKE
NYVLADSTSNSAWQLLCSWDFSITNERAVRQRKNNLRVQLKESLSEKAQRELLTLSEKLK
HFGVHLGSWFLSTGLAVGCGVSIYYLCQYEQQVATDAANWSLLQEAETLLVPFVVSLMNL
VVPLFYSLFNKFEHYSSQRRQIYALVVRNVFLKMSILAVLCYYWMNVVAQKFSCWESMVG
QALYRLVIFDFLFLMLGSFFGEFLSNVIGTRLLPRLGVPEFDVARNVLELIYAQTLAWIG
IYFSPLLPAIQILKFFILFYLKKVSLIQNCQPPRRSSRAAQMQTIFIALLFFPFFVGALS
MVAYTSWSLTPSEQCGPFQGLNNTFSVVGLWMDGLEDISGSQWAVWIYQNVIRSEIFYFF
ISLIIIVIIYIFWQVTQGRKQLIGLLRQRIINEGKDKSFLLERLQNLQKSQPDKKYKQRN
QKKHSKRRPDDHSSTGQSNSNAMVQALLARQQLEQDEERRSTGGVPVPSDISTSNALIQA
MLARQRAEDQDEDKHSQSSSALAQAMKARERADGQERDEYYSTGFSEGPIDTSSAVKQAM
QARQRAEEDRGDDANDLPSSVSSVMMQVMQAGQRAEEEDRPQWVPAPPQNSAPAGSSALI
QAMLARQQAQNEYDDGY
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtttcagaaacggaggattattcaaccctgcctaccatgacagcgagactctg
gaaattgatagaagtaaaacacaccacactaacccctatgccaggggtgagaggccagac
ggacaatactcgaccggtcagatcagcggtgatgaagctgtggggagaatgccgttgggg
ggctggcatgaggagaacttgagggggagtgaaagcatccccatggagcgcatctcaatg
cgcctaggaagtccgtcatggcagcatgacctcagtcacagtacgttccaaatcccacct
gactctcagtatgaccgatcaccttccgtgcgcctttcttctgcaacgtcaggtaacatg
acgatgagatggagaggaattacaatgagacggatgagtttgtttcctagcggggatcct
gcccacgtagccctcacagaggatgccatcaggaacgaaatggagaatgaggaacaggac
ctggtcaaggagctcgttgccctgtcaacacgagaccaaattcgggccattcgggatctt
ccaatgagctttgacgagaagaaacacatcaggagccaagtgctggcgttcaagtcttcc
aagaaatctcgccagttcacatgttttgcagactgctctgagaatgtgtcactgtctttc
cgcaggtttggctacagtatcacttcagcccggcagaccctggagctgtggcaaggcatc
atgaaagagatcggtggcaagttcggcaccagtgtcctcacctatttcgtgttcctcaag
tggctgctcatgttcaacattttctccttcctggtcaactttggcttcatcaccatcccg
ctgcttgtttacgacccctcccccaatatacctgccaatgtgagcttcagcggactggaa
atactaactggagctggttacttccactacaccgtcatgtactacggcggctacagcaat
gaaaccctgcatggcctggtggagtacaacatgcagttggcctatttcttcaccattgca
gtctacatggttctgtgcggaattgcacttatctacagcatggccagctcattcaaggaa
aactacgttctagcagactcaacttcaaacagtgcatggcagcttctctgcagctgggac
ttcagtattaccaatgagagagcagtgagacagcgcaagaacaatctacgtgtccaactc
aaggagtctttgtcagagaaggcccagagagagcttctaaccctctctgaaaagctgaag
cacttcggggttcatctgggttcctggttcctctccaccgggttggctgtcggctgtgga
gttagcatctattatctctgccaatacgaacagcaggtggcaacagatgctgccaactgg
tctctgcttcaggaggcagagactctcctggttccctttgtggtgtctctgatgaacctg
gtcgtcccgctcttctactccctcttcaacaagtttgagcactactccagtcagcgcaga
cagatctacgctctggtagtcagaaatgtgttcctcaagatgtccattctggctgtcctg
tgttattactggatgaatgtggtggctcagaagttttcatgttgggagtccatggtggga
caggctttgtaccgtctggtcatttttgatttcctttttctgatgttgggatccttcttt
ggagagtttcttagcaatgtgattgggacgagattactacctcgtttgggggttccagag
tttgacgtagccagaaatgtcctcgaactgatctacgcacagactctggcctggattgga
atctacttctctcctctgctgcccgccatccagattctcaaatttttcattttgttttac
ttgaagaaggtcagcctgatccagaactgccagcctccgcggcggtcgagcagagcagct
cagatgcaaaccatcttcatcgccctcctcttcttccctttctttgtgggagccctgtcc
atggtcgcatacacctcctggagtctgactccatcggagcagtgcggcccttttcaggga
ctcaacaacaccttcagtgtggttggattgtggatggatggactggaggatatctctggt
tctcaatgggctgtctggatctaccaaaatgtcatcaggagtgaaatcttctactttttt
atctcactcatcatcattgtcattatatatatcttctggcaagtcactcagggccgtaag
cagcttattggtctcctgagacaacggattataaatgaagggaaagacaagtccttcttg
ttagaaaggctccagaacctccaaaaatctcagcctgataaaaaatacaaacagaggaat
caaaaaaagcactccaagcggcgtccagatgaccactcctccaccggtcagtccaactca
aacgccatggttcaggcgttgctcgcccgccagcagcttgaacaggacgaagagagacgc
agcactggtggagtgcccgttccctccgacatctccacctctaacgctctgatccaggcc
atgttggcccgtcagagagctgaagaccaggatgaagataaacactcgcagtcctccagc
gccttagcacaggccatgaaagccagggagagggccgatggtcaagagagggatgaatac
tacagcacaggtttttctgaaggccctatcgacacatccagcgccgtcaaacaggcgatg
caagccagacaaagggcagaggaggacagaggggatgacgcaaatgacctgccatcctct
gtgtcgagtgtcatgatgcaagtcatgcaagccggacagagagcagaggaagaggaccgg
cctcagtgggtcccggctcccccacagaactcagctccagcaggctccagcgctctcata
caggccatgttggcccggcaacaggcccagaacgagtacgatgacggttactga
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