Anoplopoma fimbria (sablefish): 129095246
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Entry
129095246 CDS
T09102
Symbol
rhot1b
Name
(RefSeq) mitochondrial Rho GTPase 1b isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129095246 (rhot1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
afb03029
]
129095246 (rhot1b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
afb04031
]
129095246 (rhot1b)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
129095246 (rhot1b)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
129095246 (rhot1b)
GTP-binding proteins [BR:
afb04031
]
Small (monomeric) G-proteins
Rho Family
Miro
129095246 (rhot1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
Dynamin_N
Arf
MMR_HSR1
EF-hand_7
EF-hand_1
EF-hand_6
AAA_22
AAA
EF-hand_8
AAA_29
DUF2481
nSTAND1
FeoB_N
AAA_5
AAA_25
Motif
Other DBs
NCBI-GeneID:
129095246
NCBI-ProteinID:
XP_054459588
LinkDB
All DBs
Position
9:22216832..22230524
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AA seq
660 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPTVVPYRAEEITIPADVTPERVPTHIVDYSE
AEQTDEQLFQEISKANVICIVYSVNNKTSIEKVTSHWIPLITENTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNRHSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEKKD
MKPLCVKALTRIFKVSDLDNDGILNDNELNFFQRTCFNTPLESQALEDVKNVVRKNMSDG
VCDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELNQDYLFPPLKLPPDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPEETSDLFDVFPYMPWGPDVNNTVCTNDQGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIVAEQESQASGITVTRDKKIDLQKKQTQRSVFR
CNVFGDIGSGKSSFLQAFLGRNLMRQNTIKEEHRSYYAISTTYVYGQEKYLLLHEVFPDF
DYLSDADLACDIVCLVYDVSNPYSFEYCARVFKQYFMDSKIPCMMIAAKSDLPEIKQMYG
CSPLEFCRRHKMPPPQSFTCNTAAGPSKDIYTKLTTMAMHPHARLRCMCTCNRCTFCLCQ
NFLNSELLQTVRAKLYAVVLRRHVSQADLKSSTFWLRASVGATVFAVLGVAMYRVLLKTR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaggacgtgaggatattgctggtgggagagcccaaagtggggaagacgtctctc
atcatgtcactggtcagcgaggagttcccaaccgtagttccctaccgagctgaggaaatc
accatacctgcagatgtcacaccagagagagttcccacacacattgtggactactcagag
gcagagcagacagatgagcagttgtttcaggagatctccaaggcaaatgtgatttgcatt
gtctactctgtcaacaacaagacatccatcgaaaaggtgacgagccactggatccccctc
attactgagaacacagacaaggacagcagggttcctctgattctggtggggaacaagtcg
gacctggtggaacacagcagtatggagaccatactgcccatcatgaaccggcacagtgag
atagagacttgcgtggagtgttcagcaaagaacctgaagaacatctcggagctgttctac
tacgcccaaaaggcagtcctgcacccaacaggtcctctttactgtccagaaaaaaaagac
atgaagccactttgtgtcaaagccctgactcgaatcttcaaagtgtctgatctggacaat
gatgggattctcaacgataatgagctcaatttcttccagaggacgtgcttcaacacccca
ctagagtcccaggcgttggaggatgtaaaaaatgtggtgaggaagaatatgagtgacgga
gtgtgtgacaacgggctcactctgaaaggcttcctgttcctccacaccctgttcatccag
cgaggtcgccatgaaacaacgtggaccgtgttgaggaggtttgggtacgacgatgacctg
gagttaaaccaggactacctcttccctccgttgaagcttcctccagactgcaccacagag
ctcaaccacaacgcctacctcttcctccagagcgtctttgacaaacatgacaaggaccgt
gactgtgccttgtcaccagaggagacgagcgacctgtttgatgtttttccctacatgccc
tggggtccagatgtcaataacacagtttgcactaatgaccagggctggatcacctaccag
ggatatctctcccagtggacgttaacaacatatctggatgtccaacgatgcttggagtat
ttgggttacctcggttactcaatagttgctgagcaggagtcccaagcatcaggaattaca
gtgaccagagataagaagattgacctgcagaagaagcagacccagcgcagcgtcttccgc
tgtaatgtctttggtgacattggcagcggcaagagcagcttcttgcaagcgttcctgggt
agaaacctcatgcgccaaaatacgatcaaagaggaacacagatcctactatgccatcagc
acaacctatgtatacggccaggagaaataccttcttcttcatgaagtgttccctgacttc
gactacctgtctgatgctgatctggcctgtgacatcgtctgcctggtctatgatgtcagc
aacccttactcctttgagtactgcgccagagtcttcaagcaatacttcatggacagcaag
attccatgtatgatgatagcagccaagtcagacctgccagagatcaaacagatgtacggc
tgcagtcctctggagttctgtcggaggcacaagatgccacctccccagtccttcacctgt
aacactgcagcaggacccagcaaagacatctacaccaaacttaccactatggccatgcac
ccccacgctcggttgcgctgcatgtgcacttgtaaccggtgcaccttctgcttgtgtcag
aacttcctcaactctgagctgctgcagacggtcagggccaaactctacgctgttgtactc
agaagacatgtcagccaagcagacctgaagagctcgaccttctggctgagagcgagcgtc
ggggccacggtgttcgcagtgctgggcgtcgccatgtacagagtgctgctcaaaacacgg
tga
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