Anoplopoma fimbria (sablefish): 129095252
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Entry
129095252 CDS
T09102
Name
(RefSeq) proto-oncogene vav-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04510
Focal adhesion
afb04517
IgSF CAM signaling
afb04519
Cadherin signaling
afb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129095252
04519 Cadherin signaling
129095252
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129095252
09142 Cell motility
04810 Regulation of actin cytoskeleton
129095252
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Paralog
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_1
SH3_2
CH
SH3_9
SH2
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
zf-RING-like
C1_2
PH_10
DUF7145
IL5
Motif
Other DBs
NCBI-GeneID:
129095252
NCBI-ProteinID:
XP_054459598
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Position
9:6787306..6806042
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AA seq
848 aa
AA seq
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MELWRQCAVWLIDCRVLPENHRVTWESAQVCDLAQALRDGVLLCQLLNNMLPQAVNLREI
NLRPQMSQFLCLKNIRTFLGVCQEKFHLKKSELFEAFDLFDVRDFAKVIDTLSILSHSFI
ATQKGFQPFPLEGCTPDDEIYSGLSDQIDDTVDEDDDLYDFVEDEENEGDEIYEDLMRTD
EQPETHQKTGVDKRECCLQEIRQTEEKYSDTLESILLHFMKPLQKFLQAADMESIFINIE
DLADTHRNLLEEVRSSILDYGAKNLHQVFLKYKERLLLYGRYCSQVETATKHLDKLSNTR
EDIRMKLEECSNRANSRRFSLRDLLMVPMQRVLKYHLLLQELMKHTTDATDKDNLRTALD
AMRDLAMCVNEVKRDNEIIRQITTFQLSIENMTQSLAFYGRPKIDGELKVCSPEKKSKQD
RYAFLFDKAMFICKKKSGETFELKELIELQYYQIRDETTGEKDNKKWSFLFLLLDCNGGC
GFDLYFKTRDMKKKWLEQFEMAQSNMCPDNSTANNHDFQMHCFEETTSCKACSMLLRGIF
FQGYRCTRCKMAAHKECLGRVPACGRNSDHAGTVKKIKPLKSSRHSSIGFPKMEVCQEYY
GLPPPPVGFGQPLHLSRGDIIELTRADAELPWWEGRNLTVGQMGWFPCQKVQPYISKQTS
DLSGFNWFAGNMDRTAAKNLLISRSDGTFLVRQKDGGEFAISIKFNMDIRHIKITSTEGL
YRINEKKAFKGLIEMIEFYQQNSLKEYFKDVDTTLCTPYKQPEQSNSPNHTPHTTPNTTP
GGSMRSFGAVRARYDFSARDRSELSLREGDTIKILSKKGLSGWWKGEVYGRVGLFPANYV
EEDYSDYC
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtggcggcagtgtgcggtgtggttgattgactgtcgagttcttcctgagaac
caccgggtcacatgggagagcgcccaggtgtgtgacctggctcaggcgctgagagatggc
gtgctgctctgccagttgctcaacaacatgctgcctcaggccgtcaacctgagagagatc
aacttgcgaccacagatgtctcagttcctgtgcctgaagaacatccggacgtttctggga
gtttgtcaggagaagtttcacctgaaaaagagtgaactgtttgaagcctttgacctgttt
gatgttcgagactttgcaaaggttatagacactctgtccatcctctctcattcgttcatt
gctacacaaaaaggattccagcctttccctctggaaggatgcactcctgatgatgagatc
tacagcggcctgtccgaccagatagatgacacggtggacgaggatgatgacttgtacgac
ttcgtggaggacgaggagaacgaaggagacgagatctatgaagacttaatgaggacggat
gaacaacctgaaactcatcagaagaccggagtagacaaacgagagtgctgcctgcaggag
atcagacaaacggaagagaaatactcggatacactggaatccatattactgcactttatg
aagcctcttcaaaagtttctccaggctgcagacatggagagtatcttcatcaacatagag
gatttggccgacactcatcgtaatttgttggaggaggtccggagctccatcctcgattac
ggagccaagaacctgcaccaggtgttcctgaagtacaaggagaggcttttactgtacggt
cgttactgtagtcaggtggaaacggcgacaaaacacctggacaagctttcgaatacgagg
gaggacatcagaatgaaactggaggagtgttcaaacagagcaaatagtcgacgtttttct
ctcagggatttactcatggtcccaatgcagagggtcctgaaatatcacctgctgttacag
gagctgatgaagcacaccactgacgctacagacaaggacaacctccgcacagctcttgac
gccatgagagacttagcgatgtgtgtgaacgaggtgaagcgagacaacgagatcatccga
cagatcaccaccttccagttgtccatagaaaacatgactcagtctctagctttctatggt
cggcccaagatcgacggagagctgaaggtctgcagcccggagaaaaagtccaaacaggac
aggtatgcgttcctcttcgataaggccatgtttatctgtaagaagaagagcggagagacg
tttgagctgaaggagctcattgaactacagtactaccagatacgagacgaaaccacggga
gaaaaggacaataagaagtggtcctttttgttcctcctgctggactgcaacggggggtgt
ggattcgatttatacttcaaaaccagagatatgaagaagaaatggctggaacagtttgag
atggctcagtcgaatatgtgtccagataactccacagccaacaaccacgacttccagatg
cactgcttcgaggaaaccacctcctgcaaggcctgctccatgctgttaagagggatattt
ttccagggctatcgctgcactcgctgtaaaatggctgcacataaagagtgtttaggcaga
gttcctgcctgcggacgaaactcagatcatgccggtactgtgaagaagatcaaaccactg
aaatcctccagacattccagcattggatttcctaagatggaggtgtgtcaagagtattat
ggcttgcctccaccccccgtgggctttggccaaccgcttcacctctccagaggtgacatc
attgagctgacccgggcggatgcagagctgccatggtgggagggaaggaacctcacggtt
ggtcaaatgggatggttcccctgccaaaaagttcagccctacatctctaagcagacctct
gacttgtctggcttcaactggtttgcagggaacatggacagaaccgcagccaagaacctg
ttaatatcccggtccgatggaacattcctcgtgaggcagaaagatggaggagagtttgct
atcagtataaagttcaacatggacatccgacacattaagatcacgtccactgaaggcctg
taccgcatcaatgaaaagaaagccttcaagggcttaatcgagatgattgagttttaccag
cagaactctttgaaggaatacttcaaggatgtggacaccacgctgtgtacgccttacaaa
caaccagagcaaagcaactcgcccaaccacacgccacacacaacaccaaacacaacaccg
ggaggcagcatgaggagtttcggcgcagtgagggccaggtatgacttctcagccagggac
cgctcagagctgtcgctgcgggaaggagacaccatcaagatcctctccaagaaaggtctc
agtggttggtggaaaggagaagtgtacggccgggtggggttgtttccagccaactacgtg
gaggaggattactctgactactgctga
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