Anoplopoma fimbria (sablefish): 129095276
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Entry
129095276 CDS
T09102
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129095276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129095276
04090 CD molecules [BR:
afb04090
]
129095276
04091 Lectins [BR:
afb04091
]
129095276
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
SIGLEC family
129095276
CD molecules [BR:
afb04090
]
Proteins
129095276
Lectins [BR:
afb04091
]
I-type lectins (Siglecs)
129095276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
V-set
I-set
Ig_CD22
PKD
Ig_6
V-set_CD47
Ig_4
Motif
Other DBs
NCBI-GeneID:
129095276
NCBI-ProteinID:
XP_054459632
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All DBs
Position
9:811883..815932
Genome browser
AA seq
548 aa
AA seq
DB search
MSDESHQNLTIKDLTDRDENVYCCRKNGDNPINCWLKGIKLHVADLQVKVIPTTDGQTVA
LICSSSCPLTEEPAVYIWYQNREVLYQDWSPWYQQLVSSEEAVRYSCAIKGYEDLRAPEV
SVDSVTRSCFKVTYAKGTMCSNKQTSEEEPCSITYPTEVHVERTFGAEPGWITLKCNTNC
PLTDSETSYRWYKGGYLYENIKRQQATVPRSSNETFSCAVKGIEDLHSAEVCLDDPNCWS
INHVSRRICALEGSSVNISSEYSNPNNKKPKSKLWFKIKRSVKEYVQEQIKAEGGVKYHD
NMKNQHILTISNLKKDDSAEYTFILQDDKRWKRSDSPGVTLVVTGLKVELSPSAVVTEDQ
RVTLTCSTSCPLTDNTNYIWFFNSRPLTPTENHNKHLVLDPVSSQHAGSYACAVRSHNNI
SSHVKTLTVQSKRGQWTPAAAAGVCAALLVIIPLSVFCWIRKKRTSGQPPTNETSVHMEQ
LNPGPVFEDVSAPPTDQNDLVYSRVLFLRTTQILSTAESTSLRTTQILSTAESGHIQIQN
RIRCTTLL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgaaagtcatcaaaatctaacaatcaaagatctgacagacagagatgagaat
gtttactgctgcagaaagaatggagacaacccaataaactgctggttaaagggcatcaaa
ctccatgtagcagacctgcaggtgaaggtgattcccaccacagacggacagacagtagca
ctgatatgtagcagcagctgtcctctgactgaagagcctgcagtctacatctggtaccag
aacagagaggtcctctatcaggactggtctccctggtaccaacagctggtcagcagtgag
gaagcagtcagatactcctgtgctatcaaaggctacgaggacctcagagcccctgaagtc
tcagtggattctgtcacacggagctgctttaaggtgacctatgctaaagggacaatgtgt
tctaataagcagacatcagaggaggagccctgctccatcacatatccaacagaagtacat
gttgaaaggacttttggagctgaaccaggctggatcacactgaagtgtaacaccaactgt
cctctaactgactcagaaacttcctataggtggtacaaaggtggatatttatacgagaac
attaagagacaacaggctacagttccccgctcctctaatgaaacattctcctgtgctgta
aaaggaatcgaggatctgcactctgctgaagtctgtctcgatgatccgaactgctggagt
attaatcatgtcagcaggagaatctgtgctctggaaggttcttcagtcaacatctctagt
gaatattctaatcccaacaacaagaaaccaaaatctaaattatggtttaaaataaagaga
agtgtgaaggaatacgttcaagagcaaattaaagctgaaggtggtgtgaagtatcatgac
aacatgaagaaccaacacatcctgacaatcagtaacctgaagaaggatgactcagcagaa
tacacattcatactccaagatgacaaaagatggaaacggtctgattcacctggagtcact
ctggttgtcacaggcctgaaagtggagttgagtccttctgcagtggtgacagaggaccag
agagtcacactgacctgcagtaccagctgtcctctgactgacaacacaaactacatctgg
ttcttcaacagtcgacctctgaccccgacagagaaccacaacaaacacctggttctggac
ccggtcagcagtcagcatgcaggaagctacgcctgtgctgtcagaagccacaacaacatc
agctctcatgtaaagactctcactgtccagagtaaaagaggacaatggacaccagcagca
gctgcaggagtctgtgctgctctcctggttataatacccctctctgtcttctgctggatc
agaaagaagaggacttcaggtcaacctccaacaaatgaaacctcagtccacatggagcag
ttaaaccctggtcctgtgtttgaggacgtctcagctccaccaacagatcagaatgatctg
gtctacagcagagtcctcttcctcagaaccacacagatcctctctacagcagagtccact
tccctcagaaccacacagatcctctctacagcagagtccggccacatccagatccagaac
aggatcaggtgcactacgctgctgtga
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