Anoplopoma fimbria (sablefish): 129095297
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Entry
129095297 CDS
T09102
Symbol
lrrtm1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
129095297 (lrrtm1)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_14
LRR_LRWD1
LRRNT
DUF4750
HemY_N
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
129095297
NCBI-ProteinID:
XP_054459668
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Position
9:complement(10051851..10055048)
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AA seq
525 aa
AA seq
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MLMDFLLIGLYLKWPLKKPPGLILCLLGIFLRTVPLVEGVCPRLCRCDSKLLYCEGLNLT
DIPRNLSSAMGLSMRENNLTELREGQLVGLSQLTWLYLDHNNIDIVEEGAFDRLRRVKEL
DLSSNRIEILPNGTFRPLPNLRILDLSYNRLQALEPDLFHGLRKLTNLHLRYNALKFVPV
RIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTL
YMHNNRATVVVNTLDWTWHFLEKIDLSANEIEYMEPHVFESAPNLKVLMLDSNQLTSVDQ
RILDSWSSLDSITLAGNDWECSRNVCALASWLSAFRGQRDNSLLCSSPDTAQGEDVLDAV
YAFQLCEDTPMEVTTAGLYASTRDLAQGGSVFLGPFTPNPYEGEGSEVVTSSFTVTVGHD
DLESTMQIHKVVTGTMALIFSFLIIVLMLYVAWKCFPAGIRQLRQCFSSQRRKQKQKQSM
QQMAAISTPEYYVDYKPNHIEGALVIINEYGSCTCQQQPSRECEV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggatttccttctaattggactgtacttaaagtggccactgaagaagccccct
gggttgatactgtgtttattggggatttttctaagaacggttcccttggtagagggggtt
tgtccaaggctgtgccgctgcgacagcaagctgctgtactgcgaggggctcaacctcaca
gacattccccgcaatctgagcagtgccatgggcctgtccatgagagagaacaacttgacc
gagctgcgtgaaggccaactggttggtctgtcacagctcacctggctctatctagatcac
aacaacattgacattgtagaggagggtgcattcgacaggctgagacgggtcaaggagtta
gacctcagcagcaaccggattgagattctgccaaatggaacctttaggcccctcccaaac
ctgcgtatcctggacctctcctacaacaggctgcaggcactagagccagacctgttccac
ggccttagaaagctcaccaatttgcatttgcgttacaatgctctcaaatttgtgccagtg
cggatttttcaagactgccggagcatgcagtttctggacttgggatacaaccaactgcag
agcctagcgagaaactccttcgctggactcttcaagttgactgagttgcacctcgagcac
aatgagttggttaaagtcaacctggcccacttccctcgcctcatctccctacgtactctg
tacatgcacaacaatcgtgccactgttgttgtcaatacactggactggacatggcatttt
ttagagaagattgacctctcagccaatgaaatagagtacatggaaccacatgtttttgag
agtgcacccaacctcaaggtgctaatgctagactccaatcagttgacctctgtggaccag
cgcatcctggattcttggtcatctctggatagcattaccctggcagggaatgactgggag
tgcagccgtaacgtgtgtgccttggcctcttggctgagtgccttcagaggccagcgtgac
aattccctgctgtgttccagccccgacaccgcacagggagaggatgtgttggatgctgtg
tatgcttttcagctatgtgaggataccccaatggaggtaacgacagcaggcctgtacgcc
tctacaagggatctggcccagggtggttctgttttcctgggcccatttacccctaaccct
tatgagggggaggggagtgaggtggtcaccagttctttcactgtcacagtgggccatgat
gatctggagagcaccatgcagatccacaaggtggtgactggcaccatggcactcatcttt
tcctttctcatcatcgtgctcatgctgtatgtggcatggaagtgctttccagcaggaata
agacaactgaggcagtgcttcagcagtcagcgccgtaagcagaagcaaaagcaaagcatg
cagcagatggctgcaatttctacaccggagtattatgttgactataaacctaaccacatt
gagggagctctggtaatcatcaatgaatatggctcttgcacttgccaacagcaaccttct
cgggaatgtgaggtgtga
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