Anoplopoma fimbria (sablefish): 129095321
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Entry
129095321 CDS
T09102
Symbol
htt
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129095321 (htt)
04131 Membrane trafficking [BR:
afb04131
]
129095321 (htt)
03029 Mitochondrial biogenesis [BR:
afb03029
]
129095321 (htt)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129095321 (htt)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129095321 (htt)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
129095321 (htt)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_2
HEAT_EF3_N
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
129095321
NCBI-ProteinID:
XP_054459695
LinkDB
All DBs
Position
9
Genome browser
AA seq
3136 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPPTAEELVQRQKKEQATTKKDRVSHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDSESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNGASRSLRAALWRFAELAHLIRPQKCRPYLVNLLPCLSRITKRQEETVQETLAAAMPKI
MSALGHFANDGEIKVLLKSFVANLKSSSPTIRRTAASSAVSVCQHSRRTSYFYTWLLNVL
LGLLVPVDEEHPSHLVLGVLLTLRYLMPLLQQQVNTTSLKGSFGVMRKEADVQPTPEQLL
QVYELTLHYTQHWDHNVVTAALELLQQMFRTPPPELLHMLITAGSILHGTVFRQDTESRA
RSSSILELIGKMLSGEEDGLDDDAERTEVTTGVFTAAVVGADGSSATQVDIITEQPRSSQ
HTLQPGDSVDLSASSEQGGGGGGTSASDTPESPNDNEEEMLSRSSSGGANITPETADYTT
PETEGGPLGAGPTLLGTNDRSVPPSDSSQTTTEGPDSAVTPSDVPELVLDGSESQYSGMQ
IGTLQDEEDEGAAPSSQEEPQEPILQSALALSKPHLFESRGHNRQGSDSSVDRFVPKDEP
AEPEPDNKPSRIKGPIGHYTDRGVEPLVHCVRLLAASFLLTGQKNGLTPDKEVRVSVKAL
AVSCVGAAAALHPEAFFNSLYLEPLDGIPAEEQQYISDILGLIDHGDPQIRGATAILCAA
IIQAALTKTRYNIHTWLASVQSATGNPLSLVDLVPLLQKTLKDESSVTCKMACSAVRHCL
MTVCSSTLSELGLQLLINLLALRDSSYWLVRTELLETLAEMDFRLVNFLERKTEALHKGD
HHYTGRLRLQDRVLNDVVIRLLGDDDPRVRHVAASAVSRLVSRLFYDCDQGQVDPVVAIA
RDQSSVYLQLLMHETQPPSQFTVSTITRTYRGFNLSNNVSDVTIENNLSRVVTAVSHAFT
SSSSRALTFGCCEALCLLASNFPVSTWSTGWHCGYVSSSSSFSSRSSRSRGRALSVSQPS
SAPASSSTSSSAPDNERRTLTVGMANMVLSLLSSAWFPLDLSSHQDALLLSGNLLAAVAP
KCMRNPWAGEEDGSTGSTNPNPNKMEEPWAGLSEHTLVAMVEQLFSHLLKILNICAHVLD
DTPPGPAVKATLPSLSNTPSLSPIRRKGKEKDAAEQSAAPMSPKKSNEINTGRPADGTGS
TAVNKSTTLGNFYHLPPYLKLYDVLKATHANYKVTLDLHSSQEKFGGFLRSTLDVLSQLL
ELATLHDISKCVEEILGYLKSCFSREPTMATVCVQQLLKTLFGTNLASQCEGILSGPSRS
QGKALRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEQDTSGWFDVMQKAS
NQLRSNIANATRNRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVALQRQVLDLLAQLVQL
RVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIFFFLVLLSYERYHSKQIISIP
KIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKADAGKELETQKEVVVSMLLRL
VQHHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMIAKQQMHLDSPEALGVLNTLF
ETVAPSSLRPVDMLLKSMFTTPVTMASVGTVQLWVSGIMAVLRVLVSQSTEDIVLSRVHE
LSLTPHLLSCHTIRRLHQQSLSPSDPPTADTLVNQEPNGEAQKAPPEETFARFLLQLVGV
LLDDISSRQVKVDITEQQHTFYCQQLGTLLMCLIHVFKSGMFRRITAAATRLLKGEGGGG
QTGPEAGLFYPLEGLNSMVQCLITTHPSLVLLWCQVLLIIDYTNYSWWAEVHQTPRGHSL
SSTKLLSPHSSGEGEEKPEMRLAMVKREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHV
RDLINLSNEPPVQDFISAVHRNSAASGLFIQAIQSRCDNLSTPTMLKKTLQCLEGIHLSQ
SGSLLMLYVDKLLSTPFRVLARMVDTLACRRVEMLLAETLQNSIAQLPVEELDRIQEYLQ
TSGLAQRHQRFYSLLDRFRATVAGTSSPTPPVTSHPLDGDPPPAPELVSADKEWYVALVK
SQCCLRGDVSLLETTELLTKLPPTDLLDIMSCKDFNPSLLCPCLSMGIQRLARGQGLLLL
ETALQVTLERLAGVTGSLPVPHQSFLPPAQSQPYWNQLAAVYDEPGFYPRVLSLCRALSQ
YLLSVSQLPSSLHIPSDKEHLITTFTCTAAEVIAWRLLQNQLPLSVDLQWALSCLCLALQ
QPCVWNKLSTPEYTTHTCSLIYCLHLIIVAVAVSPGDQLLHPEKKKTKAERDAEDEVDSP
HANHMCEWKACEIMAELVEGLQSILALGHHRNSVFPAFLTPTLRNIVISLSRLPLVNSYT
RVPPLVWKLGWSPQPGGEYGTTLPEIPVDFLQEKDVFREFLYRINTLGWSSRTQFEETWA
TLLGVLVTQPITMDQEEETQQEEDLERTQLNVLAVQAITSLVLSAMTLPTAGNPAVSCLE
QQPRNKSLKALETRFGRKLAVIRGEVEREIQALVSKRDNVHTHHPYHAWDPVPSLSAASA
GTLISHEKLLLQINTERELGNMDYKLGQVSIHSVWLGNNITPLREEEWGEDEEDEADTPA
PTSPPVSPINSRKHRAGVDIHSCSQFLLELYSQWLIPGSPSNRKTPTILVSEVVRSLLAV
SDLFTERNQFDMMFSTLMELQKLHPPEDEILNQYLVPAICKAAAVLGMDKAIAEPVCRLL
ETTLRSTHLPSRMGALHGVLYVLECDLLDDTAKQLIPTVSEYLLSNLRAIAHCVNLHNQQ
HVLVMCAVAFYMMENYPLDVGAEFMAGIIQLCGVMVSASEDSTPSVIYHCVLRGLERLLL
SEQLSRVDGEALVKLSVDRVNMPSPHRAMAALGLMLTCMYTGKEKASPASRPAHSDPQAP
DSESIIVAMERVSVLFDRIRKGLPSEARVVSRILPQFLDDFFPPQDVMNKVIGEFLSNQQ
PYPQFMATVVYKVFQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTS
QWISALLPHVISRMGSSEVVDVNLFCLVAMDFYRHQIDEELDRRAFQSVFETVASPGSPY
YQLLGCLQSIHQDTSL
NT seq
9411 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaactgatgaaggcctttgagagtctgaagtccttccagcagcag
cagggaccaccgaccgccgaggagctggtccagagacagaaaaaggaacaggctaccaca
aagaaggacagggtctcacactgcctgacaatatgtgaaaacattgtggctcagtctctg
agaacgtcaccagagtttcagaaactgttgggcatcgccatggagatgttcctgctctgc
agtgatgacagcgaatcagatgtccggatggtagcagatgagtgcctgaacaaaatcatc
aaagctctgatggactcaaacctccctagattgcagctggaactgtacaaagaaataaaa
aagaacggtgcctctcggagtctgagggcagctttgtggaggtttgctgagcttgctcat
ctcatcagaccacagaaatgcagaccctacctggtcaacctgttgccatgcctctctcga
attaccaagcggcaggaggagacggtacaggagactctggctgctgcaatgcccaagatc
atgtccgccttggggcacttcgccaatgatggcgagatcaaggtgctgctgaagtccttt
gtggccaacctgaagtccagctccccgaccatcagacggacagcagccagctcagccgtc
agtgtgtgccagcactccagacgtaccagctacttttacacttggctccttaatgtgctg
ctgggtctgctggttccagtggatgaagaacaccccagccacctagtcctgggggtgctg
ttaacccttcgctacctgatgcctctgctgcagcaacaagtcaacaccaccagcctcaaa
ggaagctttggagtcatgaggaaggaggctgatgtccagccaacacctgaacaactgcta
caggtgtacgagctgaccttacactacacacagcactgggatcacaatgtggtcacagca
gctctggagctcctgcagcagatgttcaggactcccccaccagagcttctgcacatgctc
atcacagcaggcagcattcttcacggcaccgtttttcgccaggacaccgagagccgcgct
cgctccagcagcatcctcgagctcattggtaaaatgctttctggggaggaggatgggttg
gatgatgacgccgagagaacagaggtcaccaccggtgtcttcacagcagcagttgtcggt
gcagacggctcttctgcaacgcaggtagacatcatcaccgagcagccgcgctcctcccag
cataccctgcagcctggcgactctgtggacctcagtgcctcctcagagcagggtggtggc
ggaggcgggacatctgcgtcagacacgcccgagtcacccaatgacaacgaggaggaaatg
cttagtcgaagctccagcggcggggccaacatcactccggagacggctgactacaccaca
ccagagacggagggagggcccttaggagcaggcccgactctgctaggcactaatgatcgc
tcggttccacccagcgactcctcacagaccaccacagagggaccggactcagctgtcacg
ccttcagacgtaccagagctggtgctggatggcagcgagagccagtactctgggatgcag
atcgggacgttgcaggatgaagaagatgaaggagcagcaccttcctcccaagaagaaccc
caagaaccaatcctgcagtcagccctggcgctgagcaaacctcatctctttgaaagccga
ggtcacaaccggcagggttcagacagcagcgtggaccgctttgtaccaaaggacgagcct
gctgaacccgaacctgacaacaagccgtcacggataaagggtccaattggacactatact
gaccggggggtggagccgctggtgcactgtgtacggcttcttgctgcttccttcctactg
acaggacaaaagaatggtctgacccctgacaaggaggtgcgagtcagcgtgaaggctctg
gcggtcagctgtgtcggggcagcagcagcgctgcaccctgaagccttctttaattccctc
tacctggagccgctggatggcattccagctgaagagcagcagtatatcagtgatattctg
ggcctcattgaccatggggacccccagatcagaggggccacagccatcctctgtgcagcc
atcatacaagctgcactcaccaaaacacgttacaacatacacacctggctggccagcgtg
cagagtgcaacaggtaaccctttgtccctggtggacttggtgcctttgctccagaaaact
ctgaaggatgaatcctctgtcacctgtaagatggcctgctctgcagtgagacactgcctc
atgactgtgtgcagcagtaccttgagtgaactaggcctgcagttgttgataaaccttctt
gctctgagggactcgtcctattggcttgttcgcacagagctcttggagaccctggctgag
atggacttccggttagttaatttcctggagaggaaaacggaggctttgcacaaaggggat
catcactacactgggcggctgcggctacaggacagagtgctgaatgatgtggtcatccgt
ctgttgggagatgatgaccctagagtcaggcacgttgctgcctctgctgtcagcaggctg
gtttccaggttgttctatgactgtgaccagggtcaagtggacccagtagtggctattgcc
cgggaccagagttcagtctacctgcagctgctgatgcatgagacacaacccccctcccag
ttcacagtgagcacaatcacaaggacgtaccgaggcttcaacttgtccaacaatgtgtct
gatgtcacaatcgagaacaatttgtccagagtcgttaccgccgtctcccatgctttcacc
tcctcttcctccagagccctgacttttggctgctgtgaggccttgtgcctcctggcttca
aatttcccagtgtccacttggagtacaggctggcactgtggctacgtcagctccagtagc
agcttttcttcccgctccagtcgtagcagaggcagggctcttagtgtctcacagcctagt
agtgctccagcctcttcatccacctcttcatctgcaccagacaatgagcggaggactctg
actgtaggaatggccaacatggtcctctctttactctcctccgcctggtttccactggat
ctttcttcccaccaggatgcacttttgctttctggcaatctgcttgctgccgtggcccct
aaatgcatgcgcaacccctgggccggagaggaagacggcagcactggtagtacgaaccct
aacccaaataagatggaggagccatgggcagggctgtcggagcacaccctggtggccatg
gtggagcagctattctctcacctactgaagatcctcaacatctgtgcccatgtgctggat
gacacaccaccgggaccagcagttaaggccaccctcccctccctgagcaacaccccctcc
ctcagtcccatccgcagaaaaggcaaggagaaggatgctgctgagcaaagtgctgctcct
atgagcccaaagaaaagcaatgagatcaacacaggcaggccagcagacggcactgggtca
actgctgtaaacaaatctaccaccctcggcaatttctaccacctgccaccctacctcaag
ctctatgatgtccttaaagctacacatgccaactacaaggttacgctggacctccacagt
agccaggaaaagtttggaggtttcctgcgttccactctagatgttctgtctcagctcctg
gagctggccacactacacgacatcagtaagtgtgtggaggaaatcttgggctacctcaag
tcctgtttctccagagaaccaaccatggctaccgtttgtgtacagcagctgttgaagact
ctttttggcaccaacctggcctcccagtgcgagggcatcctgagtggacccagccggtcc
cagggtaaggctctccgtctgggctcgtctagtctgcgaccaggcctctaccactactgc
ttcatggcgccgtacactcacttcactcaggctctggccgatgctagtctccgtaacatg
gtgcaggctgaacaggagcaggacacctctggatggtttgatgtgatgcaaaaagcttcg
aaccagctgaggtccaacattgcaaatgcaacgcgcaacagaggagacaagaatgccatc
cacaaccacattcgtctgtttgagccactggtgatcaaagctttgaagcagtacactacc
agcacctctgtggccctgcagaggcaagtactggacctgctggcccaacttgtgcagctc
cgagtcaactactgcctgcttgactcagatcaggtgttcataggctttgtcctgaagcag
tttgagtacattgaagtgggtcagttcagagactcggaggccatcattcccaacatcttt
ttcttcctggtgctgctgtcttatgagcgttaccactccaagcagataatcagcatcccc
aaaatcatccagctgtgtgacggcatcatggcgagcggcaggaaagctgtcacacacgcc
atcccagccctgcagccaatagtccatgatctgtttgtgttgaggggctcaaacaaagca
gatgcaggcaaagagctggaaacgcagaaagaagtggtggtctccatgctgcttagactt
gtgcaacaccatcaggtgttggagatgttcattcttgttctgcagcagtgtcacaaagag
aatgaagacaagtggaagagattgtccagacagattgctgatgtcatacttcccatgatc
gctaagcagcagatgcacctggactctccggaggcgttgggagtgttgaacactctgttt
gagactgtggcgccctcctctctcagacctgtagacatgctgctcaagagtatgttcacc
accccggtaaccatggcgtcagtgggtacagtccagctgtgggtgtccggtatcatggca
gtgctcagggttctggtctcccagtccaccgaggacatcgtcctgtcccgggtccacgaa
ctctccctcaccccgcatctcctctcctgccacacaatccgtcgcctacatcagcaaagc
ctctcaccaagtgacccccccactgccgacacactcgtcaaccaggaacctaatggtgag
gcacaaaaggccccacctgaggaaacctttgccaggttcctcctccagctggttggagtg
ttgctggatgacatttcctccagacaggttaaggtggacattacagagcagcaacacacc
ttctactgccagcagctgggcacactgctcatgtgtctcatacatgtcttcaaaagtgga
atgtttcgcaggatcacagctgcagctacccgtctcctaaagggtgagggtggaggtgga
cagacgggccccgaggccggtctgttttaccccttagaggggctgaacagcatggtgcag
tgcctgatcaccacccacccctccctggtgctgctatggtgccaggtcctcctcatcatc
gactacaccaactactcctggtgggctgaggtgcaccagacacccaggggacacagtctc
tcgtccacaaagctgctgagccctcactcctcaggggaaggagaggagaagcccgagatg
cggttagcgatggttaaacgagagattgtacgcaggggagccctgatcctcttctgtgac
tatgtgtgccagaacctccacgactcggagcatctgacctggctgattgtcaaccatgtg
cgtgacctcatcaacctttccaatgagcctccagtgcaggatttcatcagcgccgtgcac
cgcaactcagctgccagcggcctcttcatccaggccatccagtcccgctgtgacaacctc
agtactcctaccatgttgaagaagactctgcagtgtttggaaggcatccacctgagtcag
tctggctccctgctgatgctgtatgtggacaagctgctcagtacgccattcagggttctg
gctcgcatggtggacacactggcttgtcgcagagtggagatgctgctggctgagacgctg
cagaacagtatagctcagctgcctgtggaggaactggaccggatccaggaatacctccag
accagtggcctggctcagaggcatcagaggttttactccctgctggacaggttcagagcc
actgttgccggcaccagcagccccacacctcctgtgacatcacaccccttggatggggat
ccaccacctgcccctgagctggtctctgccgataaggagtggtacgtggctctggtgaag
tctcagtgttgtcttcgtggagatgtttccctgttggagacgacagagctcctcaccaaa
ctgcctcccactgacctcttggacatcatgagctgcaaggacttcaacccaagcctgctg
tgtccatgtctcagtatggggatacagcggttagcacgaggtcaggggctgctcttgttg
gagacagctctgcaggtgaccctggagcggctcgcaggggtcaccgggtcacttcctgtt
ccccaccagtccttcctgccgcccgcccagtcacagccctactggaaccaactagctgct
gtgtatgatgagccaggtttctacccccgggttttgtcgctctgcagagctctgtcccag
tacctgctgagtgtgagccagctgccctcctcactacacattccctctgacaaggaacac
ctcatcaccactttcacctgcaccgctgccgaggtcatagcatggcgtctcctccagaac
cagttgcccctgagcgtggacctgcagtgggctctgtcctgtctgtgtctggccctgcag
cagccctgcgtctggaacaaactctccaccccagagtacaccacacacacctgctctctc
atctactgcctacacctcatcattgttgcagtggctgtgagtcctggcgaccagcttctg
catccagagaagaaaaagacgaaggcagagagagatgctgaagatgaagttgactctcca
catgctaaccacatgtgtgagtggaaagcatgtgagattatggcggagctggtggaaggc
ctgcagagcatcctcgccctgggtcaccatagaaacagtgtattccccgctttcctcaca
ccaaccttgcgcaacattgtcatcagtctgtcccgactgcctctggtcaacagctacacc
cgagtacctccactggtttggaaactgggctggtcccctcagccaggaggagagtacggc
acaacgctgcctgagatccctgtggacttcctgcaggagaaggatgtcttcagagagttc
ctctaccgcatcaacacactgggctggagcagcaggactcagtttgaggagacctgggcc
acactgctgggggtgctggtcacccaacccatcactatggaccaggaggaggagacacag
caggaggaggacttggagcgtacccagttgaatgtgttagcggtgcaggccatcaccagc
ctggtgctgagtgccatgaccctgcccactgctggcaaccctgcagtcagctgtctggaa
cagcagcctcgcaacaagagcctcaaagcactggaaacacggtttggaaggaaacttgca
gttatcaggggcgaggtggagagagagattcaggctctagtgtctaagagagacaacgtt
catacacaccacccgtaccacgcctgggaccctgtgccctctctatcggcagcctcagct
ggcacgctgatcagccatgagaagctgctgcttcagatcaacacagaacgggagttgggc
aacatggactacaaactgggacaggtctccatccactcagtgtggttaggtaacaacatc
accccactgagagaggaagaatggggtgaggatgaagaagatgaagcagacactccagcc
cccacctccccgcccgtatctcctatcaactccaggaagcatcgtgcaggtgtggacatt
cattcatgttcccagtttctcctggagctgtacagccagtggctgatccctggctccccg
agtaacaggaagaccccgaccatccttgtcagcgaagtggtccgatcgctgctggcggtg
tcggacctgttcacagagaggaaccaatttgacatgatgttctccacccttatggaacta
cagaagctccacccaccagaggatgagatcctcaatcaatacctggtgcctgctatctgc
aaagcagctgcagtactggggatggacaaagcaatagcggagcctgtttgtcgcctgttg
gagacgaccctgcgcagcacccacctgcccagccgcatgggtgctctgcatggagtgctg
tatgtgttggagtgtgacctgctggacgacacagccaagcagctcatccccaccgtctcc
gagtacctgctctccaacctcagggccatcgctcactgtgtgaacctgcacaaccagcag
catgtgttggtaatgtgtgccgtggccttctacatgatggagaactaccctctggatgta
ggagctgagtttatggctggaatcatacagttgtgtggtgtgatggtgtcggccagcgag
gactccactccctccgtcatctatcactgcgtgctgcgcggtctggagcgcctcctgctg
tcggagcagttgtcacgcgtggacggagaagcgctggtcaaactcagcgtggaccgagtc
aacatgccgtcgccgcacagagccatggccgccctgggcctcatgctcacctgcatgtac
accggaaaagagaaagccagccctgccagccgccccgcccactctgaccctcaggccccg
gacagcgagtcgatcattgttgccatggagagggtctctgtgctcttcgacaggatccgg
aaaggtttgcccagcgaggctcgggtggtgtccaggattctgccccagtttctggacgac
ttcttcccgccgcaggacgtcatgaacaaagtcatcggagagttcctgtccaatcagcag
ccttacccacaatttatggccactgtcgtctacaaggttttccagaccctccatgccacg
ggccagtcttctatggtgcgagactgggtgctgctctccttgtccaacttcacccagagg
acaccagtggccatggccatgtggagcctctcctgtttctttgtctctgcttccacctcc
cagtggatctcagccctactgccacacgtgatcagccgaatgggctccagtgaggtggtg
gacgtcaacctgttctgcctggtggccatggatttctaccggcaccagattgacgaggag
ctggaccgcagggctttccagtccgtcttcgagactgtggcctcgccaggcagcccttat
taccagctgctgggctgtctgcagtcgatccaccaggatacatcactctga
DBGET
integrated database retrieval system
