Anoplopoma fimbria (sablefish): 129095328
Help
Entry
129095328 CDS
T09102
Symbol
frem3
Name
(RefSeq) FRAS1-related extracellular matrix protein 3 isoform X1
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
129095328 (frem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
FAINT
Motif
Other DBs
NCBI-GeneID:
129095328
NCBI-ProteinID:
XP_054459702
LinkDB
All DBs
Position
9:complement(12941565..12970747)
Genome browser
AA seq
3154 aa
AA seq
DB search
MAGCLQKSPLCQKWAALRCLLVTFSLSFCFASVDAEPFDPTHLYHHRSGPNEDNIIIANN
GIRVPLGKSVFLDPLNDLVTEVQPGDRCHITVLDNDPLAQKPGMLTPKKFPCSFGPDEVK
YTHFGSRSPSKDRVKLQLRYDSQTDTVIIPFMLEVEVVFQQLEILTRNMPLNVEKLSGDS
NPIDKKGLEFSFEDGVTQCKIATLVGAGGLPRYGTLLNNPSNGQMVDCDEFVKQGIRYKH
TAKTNSPNRDYVPMMVELQDIEGNTIMQEHFQMMIRIREGAENTAPKPSFVAMMMMEVDQ
FVMTAITSDMLAAEDVESDPDDLIFNITTPLSHQQGYIISTDDQNLPITSFYQRDIKDLK
IAYKPPSEDSEVERIFQLEFEVVDTDGAVSDTFAFMIVVKPMNTLAPVATKNTGQLLFEG
QSRALSSAHNLEISDEDNLEDVRITVVDGLKHGDLTVLGARRKFFSPADLDAGIVVYQHD
GSDTYSDNIIFRMTDGSNDVEFLFPITIVPTDDEPPIINANTGLVLFKNEVMQISPFILS
ATDIDSEDSTIKFVLEAPYSTVGELLLRQVEPPSDPSLWKFSETDEMFEQVVTEWFQQDI
MEGKLFYRHVGPHSITTVIDQFLFRVQDDNDPPNQSGEHMFTIKIHPVDDLSPELFPGTT
LHMTVQEYELTHFKKKFLYYSDLDSDDRDLKYTIIKPPTDTDENNPAPLGDIVLTDSPDT
VITEFTQAQVNHHKVAYKPPDQELGITPKVAQFTFIVEDTSGNTIDGLFTIFLQPVDNKP
PLITNTGFTVLERSTYIITRKELHATDTDTDDENIIFTVTQIPRYGQLQYLGIDMTNGET
FVLEDIANGRLTYIHGGEESLSDVIKIDVSDGYHEVPIIIRITVELVDDETPKIMLPAGL
LGAAIDVLENGATEITSNVIQGRDEDTDDLILTFIVEEPPRLGEILVNGAPAERFTQEDI
INGAVVYAHTSGEIGPVKEYDSFNLTLSDLSEQWVVGGNKVQGVTVYVTILPVDSIPPIV
SVGEQFVVLEGEKNVITLEHIQAEDIDTDNEDILCTIIVQPTSGYVENISPAAGSEKSRA
GTAITAFSIKDIAIGHIFYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPIVIIPANDE
KPEIFIREFLVMEGMSIIIDTPILNAADADIPGDELHFEIIKNPKHGTIVQQLSTGTIPV
EKFNLEQIKEGSNIVYEHDDSETKEDSFVIRLSDGKHSVEKTVLIMVIPVDDETPRMAIN
DGLDVEIGETKVISNRVLKATDFDSEDKELTYVVRYGPSQGYLQRISKFGNVLGNITLGM
NFTQDEIDRQLIQYVHTGQEGIRDLLKFDVTDSINPLIDRYFYINIGSIDMVFPDVINKG
VTLKEGGRVTLTTDLLSTTDINSPDEFLTFSITRAPSRGHLESTDLPGVPISTFTQLQLA
GNKIYYIHTSDDEMKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTISKLVVEEGET
KLITPFELTAEDRDTPDNLLRFIVTQVPVHGQLLFNKTKPISTFSKQDLNENLISYKHDG
TETNEDSFSFTVTDGTHNDFYVFPDTVYETRKPQMMIIHINTVDNGVPQIVVNKAAASLK
VLQTSHLGFVITSKALRSEDRDSSQRVLKYTVSEAPLHGFIMNSALGNDSIKTFTQADID
DMKICYVLLDGSNATSDIFYFTVEDNGKNKLKPQPFRLNWAWISLEREYYLVDEDAKFLE
VTLKRRGYLGETSFVSIATKDGTAEKDKDFRGKAQKQVQFNPGQTTATWKVKIFTDQEFE
TSETFQIQLSDPVMAVLEFPDIATVEIVDPGDESTVYIPQAEFKIEEDVGELLVPVRRSG
DASQELMVVCYTQQATATGTIPSTVLSYSDYITRPEDHTSVLRFDKDEREKLCRIIIIDD
SLYEVEESFNVTLSMPMGGQVGANFPTAKITILADSDDEPSLYFGEPEYFVDESSGYVEV
KVWRTGTDLSKTATVTVRSRKSEPVSAEAGLDYVGISRNLDFAPGVTMQTFRVTILDDLG
QPELEGPETFDLVLRMPMNAVLGEPSKTTITINDTVTDVPKVQFKEGSYKVEESDGEVTA
IVYRSGDISLRSTVRCYTRQGSAQVMMDYSERPNNDASVITFLPGETEKPCVVSLMDDSV
HEEDEEFRLVLGTPKSKSPYGASIGEQKEALVTVTDGKDKPIIRFSEIKYSVREPQVKGN
VAVVKIPILRVGDTSKVSVVRVHTKDGSATSGEDYNPLSEDVEFKEGEKEHFVEIEVLYD
GQREMREAFTVHMKPDDNMVAEIQMNKAIVYIEEMDSVADVTFPAVPQVVSLLMYDDTAK
TKDKPQPPNGYPVVCVTACNPKYHDFDKTGSICSAENINDTLTQYRWMISAPTGSDGVTS
PMREVDTNTFFTNTKSITLDSIYFQTGSRVQCAARAFNANGDAGLELSSPIAVISKEEGM
CQPRVQGTVGAEPFSAKIRYTGPDDPDFPNLIKLTINMPHMDGMLPVISTRSLSNFELTL
SPDGTRVGNHRCSNLLDFNEIQTGHGFITDATKNPEIIGETSPYQYSPLMRSANSLRFYR
NLNLEACLWEFTSYYDMSELLNDCGGSIGTDGQVLNLVQSYVTLRVPLFVSYVFHSPVAV
GGWQHFDLQSELKLTFVYDTAILWQDGIGSPPEAELQGFVVTTLFSVLLGAMYPTSMRIN
EEGRLVVNFKTEARFRGQFVMSHPGTSVSSMVMCADHPGLTFTLALVRTEPTYNQPMQQW
SFVSDFAVRDYSGTYTVKIIACIASPNGEFTIPPVCHPREPLTFDMDIRFQQVSDPVAAE
FSLNTQMFLLSKKELWLSDGSMGFGEGTDAAFSDGSMIYGRVMVDPVQNLGDSFSCSIEK
VFLCTGADGYVPKYNPTNKEYGCLADAPSLLYRFKILDKAQPETQASAFGDVAFKATLAQ
DTPGGLPLVIQPGSDGFTLSSSPLFQVAAGREWFMHTIYTVRSRENANRNIGKRSVEYLH
HSMYSVEHPETSDMVSRHRRAAPALADPGVAQDIGVENNRGTNIQHIALDRADRMVVSQR
QPWSPNREPLLENPLLESSGRELADTSTLPMLVGLAGVILLICLIATVVILLLRRKKSEK
KTQFPPYTTSSSSAYNGYSQGPAGMWSSADNSEV
NT seq
9465 nt
NT seq
+upstream
nt +downstream
nt
atggctggttgtctgcaaaaatccccactttgtcaaaagtgggcagctttaagatgcctg
cttgtgacattttctctgagcttctgtttcgcctcagtagacgcagagccgtttgaccca
actcacctttatcaccacagatctggacctaatgaagacaacatcattatcgctaacaat
gggatcagggtgcctttagggaagtctgtgtttcttgaccctctgaatgacctggtaaca
gaagtgcagcctggtgaccgctgccacatcacagttttggacaatgacccactggcccag
aaacctgggatgctgacccctaaaaagttcccctgttcatttggaccagatgaagtgaaa
tacactcattttggttctcggagccccagcaaggatcgtgtgaagctgcagcttcgttac
gactcccagacggacacagttatcatccctttcatgctggaagtggaagtggttttccag
cagcttgagatcctcaccaggaacatgccgcttaatgttgaaaagctcagtggtgacagc
aaccctattgacaaaaagggtctggagttttcctttgaggacggggtcacacagtgtaag
atcgccacactggtcggcgctggaggtcttcccaggtatggcactcttttgaataacccc
tcaaatggccaaatggttgactgtgatgagtttgtgaaacagggcattcgctacaagcac
acagctaaaaccaactcaccaaacagagactatgttccaatgatggtagaactgcaggat
atcgaaggcaacaccataatgcaagagcatttccaaatgatgattagaatcagagagggt
gcggagaatactgctcctaaacccagctttgtagccatgatgatgatggaggttgatcag
tttgtgatgacagctattacaagtgacatgctggctgctgaagatgttgaatctgaccca
gatgatttaatctttaacattactacaccgctgagccatcagcagggctatatcatcagc
acagatgatcagaacctgcctatcacctctttctatcagagagacatcaaagatcttaaa
atagcatataagccaccctcagaggactcagaagtagagaggattttccagctagagttt
gaagttgtagacaccgacggggctgtgtctgatacatttgcttttatgattgtggtgaag
cctatgaacaccttggctcctgtggcgaccaaaaatacagggcagctattgtttgaaggg
cagtccagagctctctccagtgcccacaatttagagattagtgatgaggacaatctggaa
gatgtgagaataactgttgttgatggcttaaagcatggagacctaaccgtgctcggagca
cgaaggaaattcttttcacctgctgatctagacgccggcattgtggtttaccagcatgac
ggcagcgatacctatagcgacaacattatttttagaatgactgatggcagtaatgatgtg
gagtttttgttccctatcactattgttcccactgacgatgagccgcctattatcaatgcc
aacaccggcctggtgctattcaaaaatgaagtcatgcagatctctcccttcatcctgagc
gccacagatattgattcagaagactccaccattaagtttgtcttggaggcgccctactca
actgtaggggagctcctgctgaggcaagtggagcctccctccgacccgtctctctggaag
ttcagtgagacagatgagatgtttgagcaggtggtaactgaatggtttcagcaggatatt
atggagggaaagctgttctaccgtcatgtcggaccccatagcattaccactgtgattgat
cagtttttgttccgggtccaagatgacaatgaccctcctaatcaatctggcgaacacatg
ttcaccatcaaaatccatcctgttgatgacctttccccagagctttttccgggcaccacc
cttcacatgacagtccaggagtacgagctaacacacttcaagaagaaattcttatattac
agtgatctagattcagatgatagggacctgaagtataccatcattaagcccccaactgac
acagatgagaacaatccagcccccttaggtgatattgtactgactgacagcccagacact
gtaattacagagttcacacaggcccaggttaatcaccacaaagtagcttacaagcctcca
gaccaggagctgggcatcactccaaaagtggctcagttcacattcattgtggaagacact
tctggtaacacaatagatggactattcaccattttcctacagccagtggacaacaaaccc
ccacttatcaccaacacagggttcactgtattggaaagaagtacatatatcatcactagg
aaagagctgcatgccacagacacagacacagatgatgaaaatatcatcttcactgtgacc
cagattcctcggtacgggcagctgcagtatctggggatcgatatgacaaacggagaaaca
tttgtacttgaagacattgcaaatggtcgcctaacttacatccacggtggagaggaatcc
ctcagtgacgtcatcaagattgatgtcagtgatggttatcatgaggtgcccatcatcatt
aggatcactgttgaactagttgatgacgagacccccaagattatgctcccagccggtctg
cttggggcagccatcgatgtactggagaatggagccacagagattacaagtaatgtcatt
cagggccgtgatgaagacacagatgacctcatactcacttttattgttgaggagcctccc
aggcttggggagatcctggttaatggtgctcccgctgagagattcacccaggaagacatc
atcaatggggcagtggtgtatgcacacacatccggtgaaatcggaccagtcaaagaatac
gactccttcaacctcactctgtctgatttgtctgagcagtgggttgttggtggcaacaag
gtccaaggagtgacagtttacgtcaccatccttcctgttgacagcattccacctatagtc
agtgttggagagcagtttgttgtactggaaggggagaagaatgtcattactctggaacac
attcaagctgaggatatcgacactgacaatgaagatatcctgtgcaccatcatcgtccaa
ccaacatctggttatgtggagaacatctccccagctgctggctctgaaaaatccagggct
gggacagccatcactgcctttagcattaaagacattgccatcggccatatcttctatgtc
caaagcatccataaaggagttgaacccgttgaagatcgtttcaccttccgttgctcagac
ggtataaacttctctgaacgccacttcttccccatagtcatcattccagccaatgatgag
aagccggagattttcattcgtgagtttttggtaatggagggcatgagtatcatcattgac
acaccaattctgaacgcggctgatgctgacatccctggggatgagctgcactttgagatc
atcaaaaacccaaaacacggtacgatagttcagcagctcagcactggcaccatccccgtg
gaaaaattcaatttggaacagatcaaagagggatccaacattgtctatgaacacgacgac
tcagagaccaaagaggacagctttgtgatcagactctcagatgggaaacactcagtggag
aaaaccgttcttatcatggtcattccagttgatgatgagaccccaaggatggctataaat
gatggccttgatgttgaaatcggagagacaaaagtcatcagcaaccgggttttgaaagcc
acagattttgactctgaagacaaagaactaacatatgttgtgcgttacggcccaagccaa
ggctaccttcagcgcatcagcaagtttggtaatgttttaggtaatatcaccctcgggatg
aacttcacacaggacgaaattgacagacagctcattcagtatgtacacactggccaggag
ggaatccgtgacctgctgaagtttgacgtcacagatagcatcaatcccctaattgaccgt
tacttttacatcaacattggaagcattgacatggtctttccagatgttatcaacaaaggt
gtgactctaaaagaaggaggaagagtaactcttaccactgacctcctcagcacaactgac
atcaacagtcctgatgaattcctcacctttagcatcacaagagcacctagtagaggccac
ttagagagcactgacctaccaggtgttcccatttccacattcacccaactgcagcttgct
ggcaacaagatctactacatccacacctctgatgatgagatgaaaatggacagctttgag
tttgaggtgacagatggttacaatcctgtcttccgtaccttcagagtgtccatcactgat
gtagataataagaaacctgtcttgaccataagcaaactggttgtggaggagggagaaacc
aagctcatcacaccgtttgagttgacagctgaggatcgtgacaccccagacaacctgttg
cgattcatagtcacccaggtgccagtgcacgggcagctgcttttcaacaaaacaaaacca
atctcaaccttttccaagcaggacctaaacgagaaccttatcagctataagcacgatggc
actgagaccaacgaagacagcttctccttcactgtcacagatggcactcataatgatttt
tatgtctttcctgacactgtgtatgagacacgcaagcctcagatgatgatcattcacatc
aacactgtggacaacggtgtgccccagatcgtggttaacaaagctgctgcctcactgaag
gtcctccaaacaagccaccttggctttgtgatcaccagcaaggcccttcgatcagaggac
cgggacagttcccagagggtcctgaaatacactgtgtctgaggctcctctgcacggcttc
atcatgaactctgccctgggcaacgacagcatcaagaccttcacacaagctgatattgat
gacatgaagatctgttacgtgctgttggatgggagcaacgccacaagtgatatcttctac
ttcactgttgaagacaacggcaaaaacaaactaaagcctcagccgttcaggctcaactgg
gcctggatctctctggagagagaatactatttggtggatgaggacgcaaaattcctggag
gtgacactcaaacgcagaggataccttggagaaacctccttcgtcagtattgccaccaag
gatggaacagctgagaaggacaaagacttccgtggcaaagcccagaagcaggtccaattc
aacccaggacagactacggcgacctggaaggtgaagatcttcacagaccaggagtttgag
acctctgagactttccagatacagctgtcggacccggtcatggctgtgctggagtttcca
gacatcgcaacagtagagattgtggatcctggagatgaatcgactgtctacattcctcaa
gcagagttcaagattgaggaggatgttggagagctgttagttccagtgaggcgatcagga
gatgccagccaggaactcatggttgtttgttacactcagcaagccacggccaccggcacc
atacccagcactgtgctgtcctactctgactacatcacccgaccggaggaccacaccagc
gtgctgcggttcgacaaggatgagcgagagaaactctgtcgcatcatcatcatcgatgac
tccctgtatgaggtggaagagagcttcaacgtcaccctcagcatgcccatgggcggccag
gtgggcgccaacttcccaaccgccaagatcaccatcttggctgatagcgatgatgagccc
tcgctgtattttggggaacccgagtatttcgtggatgagagttcaggctacgttgaggtg
aaggtctggaggacagggaccgacctgtccaagacggctactgtcaccgtccgctccagg
aagagtgagcctgtctctgcagaagctggactagactacgtcggcatcagtcgcaaccta
gactttgctcccggagtgacaatgcagactttcagagtgaccatcctggatgacttgggt
cagccggagctggaggggcctgagacctttgacctcgtgttaaggatgcccatgaacgct
gtgctgggagaaccgagcaagaccaccatcaccatcaatgatacagtcaccgatgtgccc
aaggttcagtttaaggaaggaagctacaaggtggaggagtctgatggagaggtgacagcc
atagtgtaccgcagtggagacatcagcctcaggtcaacagttcgctgttacactcgccag
ggctctgctcaggtcatgatggactacagtgaaagacccaataacgacgcctctgtcatc
accttcttaccaggtgaaactgagaagccgtgtgtggtcagcctgatggacgactccgtc
cacgaggaggacgaggagttccgcctcgtcctgggaactcccaagagcaagtcaccgtat
ggagcttctattggggagcagaaggaggcgctggtcacagtcacggatgggaaagataag
cccatcatccgtttctctgagatcaagtacagtgtgcgtgaaccgcaggtcaaaggtaac
gtggctgtagtgaaaattcccatcctgcgtgttggagacacctcaaaggtttcagtggtg
agagtgcacaccaaggacggttctgcaacctccggagaggactacaacccactgtcagag
gatgttgagttcaaggagggcgagaaggaacactttgtggagattgaggtcctgtatgac
ggtcagagagagatgagagaggccttcactgtacacatgaagcctgatgacaacatggtg
gctgaaatacagatgaacaaggccattgtgtacattgaggagatggacagtgtggcggac
gttaccttccctgcagtgccccaagtggtttccctgctcatgtatgatgacacagctaaa
accaaagacaagccccaaccgcccaatggttaccctgttgtgtgtgtgacggcttgcaac
ccaaagtaccacgactttgacaaaaccggctcaatctgctctgcggagaacatcaacgac
actctcactcagtatcgctggatgatcagcgcccccaccgggtcagatggagtgaccagc
cccatgagggaggtggacactaatacgttcttcaccaacaccaagtccatcactttggat
tcgatctacttccagaccggctcaagggttcagtgtgcagcaagagccttcaacgccaat
ggagatgccggtctggagttgtccagccccattgctgtgatcagcaaggaggagggtatg
tgtcagcctcgtgtccaaggcaccgttggagctgaacctttctctgctaagatccgctac
accggtcccgatgaccccgacttccccaacctcattaaactcactatcaacatgcctcac
atggatggcatgttaccagtgatctccacaagatctctgtccaacttcgagctcaccctg
agtccagacggcactcgtgtgggcaaccatcgctgctccaacttgctggacttcaacgag
atccaaacaggccacggcttcatcaccgatgcaacaaagaaccctgaaatcattggcgag
acttcaccataccagtacagcccgctcatgcgctcagccaactctctgcgcttctacagg
aacctcaacctggaggcctgcctctgggagttcaccagctactacgacatgtcagagctg
ctgaatgactgtggaggctccataggcacagatggacaggtgctgaacctggtccagtcc
tacgtcaccctgcgcgtccctctgtttgtgtcctacgtcttccactctccggtggctgtg
ggaggctggcagcactttgacctgcagtcggagctcaaactcacctttgtgtacgatacg
gctattctgtggcaggacggcatcggcagcccacctgaggctgagctacaaggtttcgtt
gtgacaactctgttttctgttctcctaggagccatgtacccaaccagtatgcgtatcaac
gaggagggacgtctggtggttaacttcaagacagaggcccgcttcaggggacagtttgtt
atgtctcatccaggaaccagcgtgtcatccatggtgatgtgtgctgaccaccctgggctg
acattcactctcgccctggtcaggactgagccgacctacaaccagcccatgcagcagtgg
agctttgtctcagactttgctgtgcgagactactccgggacttacacggtgaagattatc
gcctgcattgcatcacccaatggagagttcaccatccctcctgtctgccacccaagagag
ccccttaccttcgacatggacattcgcttccagcaggtgagtgacccggttgcagccgag
ttcagcctcaacactcagatgttcctgctgtccaagaaggagttgtggttgtctgacggc
tccatgggctttggagaagggactgatgctgctttttcagacggctccatgatctacggt
cgtgtgatggtggacccagtccagaacctgggcgactccttctcctgcagcattgaaaaa
gtcttcctctgcaccggagcagacggctacgttcccaagtacaaccccaccaacaaggag
tatggctgtctggcagacgctccctctctgctctacagatttaagatcctggataaggcc
cagccagagactcaagcttcagcatttggtgatgttgcttttaaggcaacgctggctcaa
gacacacctggaggtctgcctttggtcatacaaccaggatcagatgggttcacactctcc
tcctcgccacttttccaggtggcagctggtcgagaatggttcatgcacacaatctacaca
gtccgctcccgagagaatgccaaccgcaacatcggcaagcgcagtgttgagtacctgcat
cacagcatgtactctgttgagcatcctgagacctccgacatggttagccgccaccgccgg
gccgcccctgctctcgctgaccctggcgtggcccaggacatcggtgtcgaaaacaaccga
ggcaccaacatccagcacatcgctctggaccgagcggaccgcatggtagtcagccagcgc
cagccctggtcccctaaccgggagcccttactggagaaccccctgctggaaagttctggc
agagaactggctgacacttccaccctgccgatgttggtgggtctggcaggtgtgatcctt
ctcatctgcctcatcgccactgttgtcattcttctgctgcggcgcaagaagagtgaaaag
aagacccagttccctccttacaccacctcctcttcttctgcctacaacggctatagccaa
ggcccagcaggcatgtggagcagcgcagacaactctgaagtctaa
DBGET
integrated database retrieval system
