Anoplopoma fimbria (sablefish): 129095376
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Entry
129095376 CDS
T09102
Symbol
si:ch211-79m20.1
Name
(RefSeq) serine/threonine-protein kinase LATS1
KO
K17386
platelet-derived growth factor subunit B
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
afb04510
Focal adhesion
afb04540
Gap junction
afb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129095376 (si:ch211-79m20.1)
04020 Calcium signaling pathway
129095376 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129095376 (si:ch211-79m20.1)
04540 Gap junction
129095376 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
129095376 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
afb04052
]
129095376 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
afb00536
]
129095376 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
afb04052
]
Cytokines
Growth factors (RTK binding)
129095376 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
afb00536
]
Heparan sulfate / Heparin
Growth factors/receptors
129095376 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
129095376
NCBI-ProteinID:
XP_054459770
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Position
9:complement(1015274..1029761)
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AA seq
529 aa
AA seq
DB search
MRSWVLLLLLTALTAARLRPGSAEGDPLPSSLVDLVRNSPISSVDDLKLLLQQETNAIEE
EEDEHDILTNHTHGRFTRSLVEAQQAQQAACKVRTEVMEVTRSMLDRRNANFLLWPPCVE
VQRCSGCCNTRMLQCVATVSSTRYLQVTKIQYINRKAHYEKAIISVEDHVSCRCQPSSSS
SQSVPIQTNPNPLPPPPPPPAHLPPPPRTVHPPPPKTHASNKADLHRHDDLKHNQQRFRP
EERDPVARQWQQGSYTQLVHWTQPRVQQPIVGVLGSVGSWPSEARAEHSIMGGAPQVGHG
SGYDGSREESGVHVANGGGEAHHPDHMQRQQQLLHHQQRHHHHQPHHPKHRLDTLQSDAA
SPSGSPTHPPKLEESPAPPTPTIQRDSVTSRQTTEVTKQTETVAASQASGGSEREESGSA
NSGDSAAVEPTNQETQKDLKLSSGFGNLTEEERRRKALEMIQTEPDLQTHLHPHHPQQRP
KPTTFKTALSTAAPVSPSARRAPFRPASPRRRRKHRKRISKAALRAMIM
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctgggtcctgctgctgctcctcactgcgctgacagcggcccggctgcggccc
ggcagcgctgagggagatccgctgccctcgtcgctggtcgacctggtgaggaactccccc
atctcctctgtggacgacctgaagctgctgctgcagcaggagaccaacgctatagaagag
gaagaagacgagcatgatattctcacaaaccacacccacggccggttcactagaagtctt
gtggaggcacagcaggcccagcaggcggcatgtaaagttcggacggaggtgatggaggtg
acgaggtccatgctggaccgccgcaacgctaacttcctgctgtggccgccctgcgtggag
gtgcagcggtgctccggctgctgcaacaccaggatgctgcagtgcgtcgccaccgtctcc
tccacccgatacctgcaggtgacaaagatccagtacataaacaggaaggcccactacgag
aaggccatcatctcggtggaggaccacgtcagctgtaggtgccaaccttcctcctcctcc
tcccagtcggtccccatccagaccaaccccaacccccttccacctccacctcccccgccc
gcccaccttcccccccctccccggaccgtccacccgcctccaccaaagactcacgcctcc
aacaaggccgacctccatcgccacgacgacctgaagcacaaccagcagcgcttccgcccc
gaggagcgggacccggtggcgaggcagtggcagcagggcagctacacccagctggtgcac
tggacgcagccccgggtgcagcagcccatcgtcggggtgctggggtccgtcggcagctgg
ccttccgaggcgagggcggagcacagcatcatgggaggtgcgccgcaggtcgggcacggg
agcgggtatgacgggagccgggaggagagcggcgtgcacgtggcaaacggcggcggcgag
gcgcatcatccggatcacatgcagagacaacaacagctgctacaccatcagcaaagacac
caccatcatcagccgcatcaccctaagcatcggctggacactctgcaatccgacgccgcc
tcgccgtccggcagcccgactcacccgcccaaactggaggaaagccccgcccctcctacg
cccaccattcagagagactcagtgaccagcagacaaaccacagaggtcacgaaacagact
gagactgtagcagccagtcaggcatcgggaggcagcgagagggaggagagcggctcggcc
aatagcggagactcggccgcggtggagccgaccaatcaggagacgcaaaaagacttgaaa
ctgagcagcgggttcggtaatttaacggaggaggagaggagacggaaggctctggagatg
atacagacggagccggacctccagacccatcttcatccacatcatcctcagcagagacca
aagccgaccacctttaaaacagccctctctactgcggctcccgtctcgccctcggcccgc
cgggcgccgttccgtccagcatcgcctcgccgccggaggaaacaccgcaaacgcatcagc
aaagcagccctcagggccatgatcatgtag
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