Anoplopoma fimbria (sablefish): 129095417
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Entry
129095417 CDS
T09102
Symbol
sorcs3a
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129095417 (sorcs3a)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Others
Others
129095417 (sorcs3a)
Endosome - Lysosome transport
129095417 (sorcs3a)
Endosome - Golgi transport
129095417 (sorcs3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
DUF7114
Motif
Other DBs
NCBI-GeneID:
129095417
NCBI-ProteinID:
XP_054459817
LinkDB
All DBs
Position
9:complement(17997343..18237217)
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AA seq
1236 aa
AA seq
DB search
METWAGFCPGFCPGLHLSLGIWVVIAAQTLQNARAEITCASCAAPVQLHVEELKLTRART
STDPTEEPDTRKHIPVEFTDPHAGVDADREPGVPVGDVPPSPQHVRLDGVSAKEEDSGSR
ELSDRGSERAEEPGQAEDAAPRRAKRSGPEHGRTGRTGGDAGAPEDRGSLFDGHQQGRSE
FRWNRDEARGNNRQDEPALSGSTFSLAGDSAHNHAVVYWSGHNSSVILILTKLYDFHIGS
VTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPTNKRKIMVLTDPEFESSVLISSDE
GASFQKYRLTFYILSLLFHPTEEDWALAYSHDQKLYSSVDFGRKWQIIHERVTPNRFYWS
VSGLDKEPDLVHMEAHTPDGNVQYVTCRAPMCTEANRNYPFTGYIDISSLVVQDDYIFIQ
VPTSGRATYYVSYKRDTFIQIKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQNDTYNLYLS
DTRGIYFTLAMENVKTTKGIGGNQMLDLYEVAGIKGMLIANKRQDNQVKTYMTYNKGREW
RLLQAPATDLDGNDIHCILPFCSLHLQLHMSENPYLSGTISTKNSAPGIIVATGNIGAEL
SYNNVGMFISSDAGNSWRQIFEEEHNVWFLDKGGAIVAVKQPSVPTRHLWVSFDEGRQWT
QHSFSLVPLFVDGVLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSIFSRKCTEEDYQTW
HLHNQGEPCVMGQKQIYMKRRPGNYCMLGKDYSRILSAESCICRAHDFECDYGYERRSDG
NCRPAFWFNPSTVSRSCSQGQNYLNSTGYRKVVLNNCTKGVKEMYTARKQQCPNRPPKGL
LLTTKDGKLTANLGSNVTFLVHLDEGDSLRTNIQLDFGDGTAVSYSNLSWTEEGIKHVYK
SAGIFRVTALAENTLGHDSTTLFLHVICPVEHVRLLTPFVVIKNKEVNITAVVLPSHSRT
VTYFWWLDNNTEPVITLDGSISHTFPNDGMHTITVQVAAANSILQDTKTIAVKDFFKSLL
LSFSPNLDEFNPDIPEWRQDVGRVIKKALLQVSDFPEEQLLVAVFPGVPTAAELFLLPHK
NQSEGKKKSEEELEQVSDIIVSALNQNLVEFELKPGVRVIVYNTQLTLAPLVDSNPRHSS
SAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGQGDSTPKITLSE
FSTSKELMEKELDARVKRGVGNACESTREIPNCTSV
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggagacttgggctggcttctgcccaggcttctgcccaggcttgcacttatctctgggc
atctgggtggtgatagccgctcagaccctgcagaatgccagggccgagataacttgcgca
tcttgtgcggcgccagttcaacttcacgtggaggaattaaagctgacccgagcccgtacg
agcactgacccgacagaggagccggacacccgaaaacacatcccagtagagttcaccgac
ccacatgctggagtggacgccgaccgtgagccaggcgtccccgtcggggatgtccccccg
tcccctcaacacgtccgtctggatggagttagtgcaaaggaagaggactcggggtccaga
gagttaagtgaccgcggcagtgagagggcagaggagccggggcaggctgaggatgctgcc
cctcgcagagcgaagaggagcggtcctgagcacgggcggaccggccggaccggcggggat
gcgggcgctccggaggaccggggctcgttgtttgacggacaccagcagggcaggtctgag
ttcagatggaacagggacgaggcgagagggaataaccggcaggacgagcccgcgctcagc
ggcagcaccttctctctggccggggactctgcgcataaccacgcggtggtctactggtcc
ggacacaacagcagcgtgatcctgatcctaaccaagctgtatgactttcatattggcagc
gtcactgagagcactctttggagatctactgactatggctccacatacgagagaatgaac
gacaaagttggatccaagactgtcctgagttacctgtacgtctgtccaactaacaagaga
aagattatggtgttgaccgatccagagtttgagagcagcgtgctgatcagctctgatgag
ggagccagtttccagaagtaccgcctcactttctacatcctgagccttttattccacccc
actgaagaggattgggccttagcctacagtcacgaccagaagttgtatagctcggtggac
tttggaagaaaatggcagatcatccacgaacgtgtcacaccaaacagattctactggtct
gtctccggcctcgacaaggagccagatctggtccacatggaggctcatacaccagatgga
aatgtgcagtatgtcacatgcagagctccgatgtgcacagaagctaacagaaactaccca
ttcactggatacatcgacattagctctttggtggttcaagatgactacatattcatacag
gttccgacatcaggacgagccacctattatgtgtcctacaagagagacacattcatacaa
atcaaattacccaaatattccctgcctaaggatttacacattgtcagcaccgatgagaaa
caggtattcgcggcggtgcaggagtggaaccagaacgacacctataacctctacttgtct
gacacaagaggaatctacttcaccttggccatggaaaatgtcaagaccaccaaaggcatc
ggagggaaccagatgctggatctgtacgaggtggcaggaattaaaggcatgttgatcgct
aacaagaggcaagacaaccaagtgaagacctacatgacctacaataaaggccgggagtgg
aggcttctgcaggctccggccactgacctggatggaaacgacattcactgcatactgccc
ttctgttcactccatctccaactgcatatgtcagagaacccttacttgtcaggaacaatc
tccaccaagaattcagcaccagggatcatagtcgccacagggaatatcggagcagagctg
tcttacaacaatgttggcatgttcatatcatcggatgctggcaatagctggagacagatt
tttgaagaggagcacaatgtgtggtttctggacaaaggaggagccatcgtcgctgtcaaa
cagccgtctgtgccgaccagacacttgtgggtcagctttgacgaggggaggcagtggacc
cagcacagcttctccttggtgcctctgttcgtggatggagtcttggtggaggctggggct
gagaaccaaatcatgaccttttttggacacttcagccatcgttctgaatggcagctcatc
aagatcgactacaagtccatttttagcaggaaatgcacagaggaagactatcaaacctgg
cacctgcacaaccagggggagccatgtgtgatggggcaaaaacagatttacatgaagcgc
aggcctggaaactactgcatgctgggaaaggactactccagaatcctttcagctgagtcc
tgtatttgtcgagctcatgattttgaatgtgattatggatacgagcggcgcagcgacggg
aactgccggcctgccttctggttcaacccctccactgtctccagaagctgcagccagggt
caaaactacctcaacagcacagggtaccgcaaagtggtgttgaacaactgcactaaagga
gttaaagaaatgtacacggccagaaagcagcagtgccccaacagaccgcctaaaggactc
ctgctcaccaccaaagacggcaaactcaccgccaacctgggcagcaacgtcaccttcttg
gttcatctggatgagggtgactctctgcgcaccaacatccagctggatttcggcgatggc
acggccgtgtcctactccaacctgagctggactgaggagggcatcaaacacgtctacaag
tctgcaggaattttccgtgtcacagctctggcagagaacacgctgggtcatgattccaca
acactcttcctgcatgtcatatgtccagtggagcatgtccggcttctcactcccttcgtg
gtcataaagaacaaggaggtgaacatcacagcagtggtcttacccagccactcacgtact
gttacttacttctggtggctggacaacaatacagagcccgtgataacgctggacggcagt
atctcacataccttccccaacgacggaatgcacaccatcactgtccaagtggctgcagcc
aacagcatactgcaggataccaagaccatagcagtcaaagatttcttcaaatctctactt
ttatctttctcccctaatctggatgagttcaaccccgacatacccgagtggagacaggat
gtggggagagtaattaagaaggctttgctccaagtgtctgacttcccagaggagcagctc
ttggtagcggtgttcccaggagttccaacagctgctgagctcttcctgttacctcacaag
aaccaatcggagggcaagaaaaagagtgaggaggagctggagcaggtatccgatataatt
gtaagcgcgctgaaccaaaacctggtggagttcgagctgaagcctggtgtaagggtgatt
gtgtacaacacacagttaacactggcaccgttggtggactctaacccccgacacagcagc
tccgctatgctgatgctcctctcggtggtgttcctgggcctagcagtgttcctcatctac
aaattcaagagaaaaataccttggatcaacatatacgctgaggtgaaccaggagaaagag
caggagatgattggctcggtgggccagggcgacagcacgccgaaaatcactctgagtgag
ttctccacatccaaagaactcatggagaaagaactggatgccagggtgaaacgaggagtt
ggaaatgcctgcgagagcacaagggagattccaaactgtactagcgtgtaa
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