Anoplopoma fimbria (sablefish): 129095481
Help
Entry
129095481 CDS
T09102
Symbol
si:dkey-92j12.5
Name
(RefSeq) multiple PDZ domain protein
KO
K06095
multiple PDZ domain protein
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129095481 (si:dkey-92j12.5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
L27_1
Motif
Other DBs
NCBI-GeneID:
129095481
NCBI-ProteinID:
XP_054459911
LinkDB
All DBs
Position
9:20659618..20698735
Genome browser
AA seq
1914 aa
AA seq
DB search
MDIMDAQRALEAVERLQAKLKERGEAPTQEKLSLLKTVLQSPLFHHILSLQQAQRKPPAK
GKISKSVSMNCGPCQGVASDLKTLSHSDSYTWAMENRGPGSTRSIHREGSFSSLGSQDLS
FSDIYQDNCVHTESQYCTPPRISRTMSMGRNLSAIAHERRHVEMLELINDGRGLGFGIIG
GRSTGVMVKTILPGGAAGRDKRLSSGDQILRIGDTDLAGMNSEQVAQVLRNAGTKVKLLI
ARDVTKDNHLSSPVLSQDSLDGKLNDVNDDYEFSVQFTKNSHGLGFTISSYIGDLNSVYS
AGVIVKSIVKGSTVDQDGRINIGDVILSVDGASLQGCSEQRAMEVLRRTGPLVRLKLLRK
AVRLSHILPPVPPLHPLRHSHSFNEGNPYRLGLNRIQETGICSLREISRRAAYANGHPRH
SSRNGVKLTPAEEDDLMKRWQHAVGQRYEVIVCQLERFSETSGLGISLEARAGHHYLCSV
LPEGPVGQSGKIFTGDQILEVNGIPLIGETHKEVVNILKELPKHVCLVCSHIVPPTIPDS
DEEDEDDVHLTLKELLAEFNDKLDQGCVIPCPTAEDITKRGVPPMSPPLAMWERDAQVVE
LEKGELGLGFSILDYQDPEDATKTVLVIRSLVPGGVADRDGRLLPGDRLMFVNESDLEGS
SLDYAVHVLKSTGYGTVRIGVAKPLPLELCGGLTPISERSLRASSDDTDRHSQISLLAEA
AGANSNRNSEDNSSIIQPCYTSTEHRPRHRFGIMEDDFRQRAPPLPPRTSFERTITVVRG
NRSLGMSVSAIKDGSGMLVRSVFQGGSVSQDGRLGVGDAILAINGEPTSNLTNARARAAL
RRHSVIGPEISITYVPAHQVDQYRTRLCLPPLDTIAADSASSSPTPPTPSPEHSSAPARS
PGPVRAAAPTTAQSAAASVKFKAPAPDPAAVRAPASSKAPFKGPAAVPTITPAPDSSWQL
PKSLPPKKKEEGEIAQEKKEKTSADVKAPQLEVEVKVDGEEELGSHSAVSWDQPRSVWLT
RAPGQSLGISIMGGRGMGRRLSTGEMMRGVFIKHISPDSPAAHNGTLRTGDRILEVCGVD
LRDASHEQAVEAIRRAGDSVVFLVQSGQHRSQSPMLANHERLTPTPQSNSHSGKEAETHS
LFLTLSPTNPYTPTPFKVPSPKSDGTDRRSAATAAAPITTPAEDEGDTGRKKMLQRYGSL
SGKLHMIELEKDPAARGLGIVLSGNKDGSRARMSVHVAEIDPRGPAGLDGRIRVGDELLE
INGQILYGRSHQNASTIINNAPSKVKIILIRNEAALGQTGYTAAGEDAVDSRTDAAERGG
LAGDVQHIILPQDHMGLGLCLAEGKSKDGAVVRSLIQHGTASKDGRMKVGDRIIAVGDEP
VAGLSVAKVSSLILEQRVTVDLSVSRSKSLPPSSPLLSRPLSLTPASLPFPVPSHPQPLH
AARTSPTGRSDWLGSAPTTSDPLICPVAAGAETTIEFCKGNVGLGLSIVGGCDTLLGAVI
IHEVNDGGAAQRDGRLQAGDHILEVNGIDLRQATHDEAIGVLRLTTQRVRLCVFRHQEAY
REEDLWDVFSLELRPRPGEGLGFTTVGKSNDTGIFVSDLIRGGVADSDGRLLLGDQILSI
NGEDVRAASQEHTHELLQSCSGVVQLEVARFKAGLQYSQQSQLCFIQSEDSDCSTLTHSS
GCDALLGHQRETDNKTGSYSFQDYPDVRQVIIQKGPCDSLGISVAGGAGSPHDNVPLFIA
TMDTDGLAAKTQQLQAGDRILSINDMSMEGMTRVQAGALLQNATGTIRLQVAAASGGCST
KDQNDVRTPSSGQPSSLPRFHNNLCARTYKTVTLERGSSGLGFSIVGGFSSPHGDLPIYI
KTVFNKGAAVEDGRLKRGDQIIAVNGHCLEGVTHGEAVDILKKTRGSVVLTVLT
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatggatgctcagcgggccttggaggctgtggagagactgcaagccaaactg
aaggagcgaggagaggcccccacgcaggagaaactctccctgctgaagacggtcctgcag
agccccctgttccatcatatactcagcttacagcaagctcagcggaagcccccggcgaag
ggaaagatttccaaatccgtgtccatgaactgtggcccctgccagggcgtggcgtcggac
ctgaagacgctgagccacagcgactcctacacatgggccatggagaaccgagggcccggc
agcaccagatccatccacagggaaggcagcttctcctccctgggctcgcaggatctgtcc
ttctcggacatctaccaggacaactgcgttcacactgagtcacaatactgcaccccacct
cgaatctcccgcaccatgtccatggggagaaacctgtctgccattgctcacgagaggcgt
catgtggagatgctagagctgattaatgacggcagagggcttggttttggcatcatagga
gggcggagcacaggcgtcatggtcaagaccatccttcctggcggagctgccggacgggat
aagcgcctgagtagtggggatcaaatcctgcgcatcggagatacggatctggcgggcatg
aacagcgagcaggtggcgcaggtgctgcgaaatgctggtaccaaggtgaaactgctcatc
gccagggacgttaccaaggacaaccacctttcctctccagtcctcagccaggacagcttg
gatggcaagctcaatgatgtgaatgacgactatgagttcagcgtgcagttcactaagaac
agtcatggcctgggattcaccatttctagctacataggtgacttaaactcagtctacagc
gccggtgtgatagtgaagagcatagtgaaaggcagcaccgtggatcaagatggacgcatc
aacattggagacgtcatcctatctgtggacggggcgagcctgcagggctgcagcgagcag
cgtgccatggaggtgctgaggaggacgggcccactagtccgactgaagttgctgaggaag
gcggtccgcctgagtcacatcctgcccccggtccctccgctgcaccccctccgacactcc
cacagcttcaacgagggcaatccctacagactgggcctcaacaggattcaagagacagga
atctgctccctgcgtgaaatctcccggcgagcggcatacgccaacggacatcccagacac
agttctagaaacggtgtgaaactgacgccggctgaggaggacgacctgatgaagaggtgg
cagcatgcagtcggacagcgatacgaagtcatcgtgtgtcagctggagcgtttcagcgag
acaagcggtctcggcattagtttggaggcccgggcggggcatcactacctgtgctccgtt
ttacctgaggggcccgtcggccaaagcggcaagatcttcactggagaccagatactggag
gtgaatgggatccctctcatcggagagacacataaggaggtggtcaatattctgaaggag
cttccgaagcatgtctgcctggtttgctcccacatcgtacccccaacgattcccgacagc
gatgaggaagacgaagatgacgtccatctcaccctgaaagagctgctggccgagttcaac
gacaagttggaccagggttgtgtcattccctgtcccacggccgaggacatcaccaagcgc
ggcgtgccccccatgtctcctcctctggccatgtgggagagagatgctcaggtggtcgag
ctggagaaaggcgagttgggcctgggcttcagcatcctggactaccaggatcctgaagac
gccaccaaaacagtcctggtaatccggtccttggtgcccggaggtgtagcggaccgagac
ggtcgcctgctgcctggtgaccgactcatgttcgtcaacgagagtgacctggagggctcc
agcctggattacgccgtgcacgtcctgaagtccaccggctacggcacggtccgcatcgga
gtggccaaaccactgccgctggaactgtgcggcggcttgacgcccatctctgagaggagc
ttgcgggcctccagcgatgacaccgaccgacactctcagatcagcctgctagcagaagca
gctggggctaacagtaaccgcaactctgaggacaacagcagcatcatccagccgtgttac
acttcaacggaacaccggccccggcatcgtttcggcatcatggaggacgacttcaggcag
cgggcgccgcctctgcccccccgcaccagctttgagaggacaatcactgttgtccggggc
aaccgtagccttgggatgtcggtgagcgctatcaaggacggttcaggcatgctggtgcgc
agcgtgttccaggggggctccgttagccaggatggcaggctgggggtgggggatgccatc
ttggccatcaacggagagcccacctccaatctgaccaacgccagggccagggccgcgctc
cgcaggcactccgtcatagggccggagataagcataacctacgtcccagcccatcaggtg
gatcagtaccgtacccgtctctgtttaccccctctggacaccatcgcagcagacagcgcc
tcctcctcccccacccctccgaccccttctccagagcactcctcggccccggcaagatcc
cccggtccggtgagggccgcagctccgactacagcccagtcagccgctgcctcagtcaaa
ttcaaagccccagctccagatcctgcagcagtcagagctccagcttcatccaaagctcca
ttcaaaggcccagccgctgtccctaccatcaccccggccccggactcaagttggcagctc
ccgaaatctctacctcccaagaagaaggaggagggagagattgcgcaggagaaaaaggag
aagaccagtgcagatgtgaaagcgccacagctggaggtggaggtaaaggtggacggagaa
gaggagcttggctctcacagcgcagtatcatgggatcagcccagaagtgtgtggctcact
cgagcgccgggccagtccctgggcatcagcataatgggaggcagaggcatgggccggaga
ctgagcaccggagagatgatgaggggagtcttcatcaagcacatcagccccgacagcccg
gcagcacataatggcaccctccggaccggagacaggatactagaggtgtgtggcgtggac
ctgagggatgccagtcatgagcaggcggtggaggccatccgcagggccggagactccgtg
gtcttcctggtccagtctggacaacacagatctcagtcccctatgctcgccaaccacgag
aggctaactccgacgccacagtccaactcgcacagcggcaaggaagcagagactcacagt
ctgttcctaaccctctcccctacaaacccctacactcccaccccctttaaggtgccttcg
ccgaaatccgacggaacggatcggaggagcgccgcgaccgcagcggcaccaatcacgacg
ccggctgaggacgagggcgataccggcaggaagaagatgctccagcgttacggcagcctg
tccgggaagctccacatgatcgagctggagaaagacccggcggctcgcggcctggggatc
gttctctcgggcaacaaggacggctccagggcccgcatgagcgtccacgtagcggaaata
gacccccggggacccgccggtctggacgggcggatacgcgtaggggacgagctgctggag
atcaacggtcagatcttgtacggccggagtcaccaaaacgcctccaccatcatcaacaac
gctccgtctaaagtcaagatcatcctcatcaggaatgaagcagctctgggtcagacggga
tacacggcagcaggcgaggacgcggtcgactcccggacggacgccgcagagcgcggagga
ttagccggagacgtccagcacatcatcctacctcaggatcacatgggtctcgggctctgc
ctggcggaggggaagtccaaggacggagcggtggtccggtccctgatccagcatggcact
gccagtaaggatggcaggatgaaggttggagacagaatcatagcagtgggtgatgaacct
gtggcaggcctgtcagtggccaaggtgtccagtttgattctggaacagcgggtcaccgtc
gatctctccgtcagccgctccaaaagtctccccccctcttctccacttctttcccgtcca
ctctctctcactcccgcctccctccccttccccgtcccctcccatccccaaccgctccac
gctgcgcggacctctcccaccgggcgctccgattggctgggatctgctcccacgacgtcc
gaccccctgatctgcccggtcgcggctggcgcggaaaccaccatcgagttttgcaaagga
aatgtaggcctgggcctcagcatcgtcggaggatgtgacactctgctgggggcagtaata
atccatgaagtaaatgatggaggagcagcacagagagacgggaggctgcaggctggagac
cacatattagaggtaaacggcatagacctgcggcaggccactcacgacgaggccatcggc
gtgctgcggctcaccacccagcgcgttcgcctgtgcgtcttcaggcaccaggaggcctac
agggaggaggacctgtgggacgtcttcagcctggagctgaggcctcgtcctggagagggg
ctggggttcaccactgtggggaagagtaatgacacgggcatctttgtgtcagatctcatc
agaggaggcgtggcggattcggatggcaggctgttgctaggcgaccaaattctgtcaatc
aacggggaagatgtccgcgcggcatcgcaggagcacacgcacgagcttctacagagttgc
agcggagtggtccaactggaggtggctagattcaaagctgggctgcagtactcacagcag
agccagttgtgttttatccagagcgaagactccgactgctccaccctgacacactcaagc
ggctgcgatgctttgctcggccaccagagggagacagacaacaagacagggagctactca
tttcaagactaccctgacgtcagacaagtaataatacaaaagggtccatgtgactccctg
ggcatcagtgtagcaggaggagcgggcagtccccatgacaacgtgcctcttttcattgct
accatggataccgatggactggctgccaaaacgcagcaattacaggcaggagacaggatc
ctcagtatcaatgatatgtccatggagggaatgactcgcgtccaagctggagccctgctc
cagaacgccaccggaaccatccgtctgcaggtggcagccgcttctggtgggtgcagcaca
aaggaccagaatgatgtacgcactccgtcgtcaggccaacccagcagcctgcctcgcttt
cacaacaacctctgtgctcgcacgtataagaccgtcactctggagaggggctcctcgggt
ctgggcttcagcatcgtgggagggttcagcagccctcacggagacctgcccatctacatc
aaaactgtcttcaacaagggggcggccgtggaggacggccggctgaagcgcggggaccag
atcatcgccgtgaacggacactgtctggagggcgtgactcacggcgaggccgtggacatc
ctgaagaagaccagggggagcgtggtgctgacggtgctcacctga
DBGET
integrated database retrieval system
