Anoplopoma fimbria (sablefish): 129095506
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Entry
129095506 CDS
T09102
Symbol
khsrp
Name
(RefSeq) far upstream element-binding protein 2
KO
K13210
far upstream element-binding protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129095506 (khsrp)
03041 Spliceosome [BR:
afb03041
]
129095506 (khsrp)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
129095506 (khsrp)
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129095506 (khsrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
FUBP_C
KH_Vigilin
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
129095506
NCBI-ProteinID:
XP_054459945
LinkDB
All DBs
Position
9:complement(26925498..26932209)
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AA seq
668 aa
AA seq
DB search
MSDYGGLPTNGVGAGMKNDAFADAVQRARQIAAKIGGDGVSSVSNNGGAENYPFTSQKRS
LEEADEPDAKKVASQGEIDSAMSIGAQLAALSQQSVRPSTMTEEFGVPDGMVGLIIGRGG
EQINKIQQDSGCKVQIAHDSAGLPDRTVSLTGSPDAIQRAKALIDDIVSRGHEAPNGQSG
SMQEMIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQPPNIDKPLRIIGDPYKVQ
QAKDMVNEILRDRDHAGFGDRNEYGPRMGGGGGGGGGGAVQIAVPRHSVGVVIGRSGEMI
KKIQSDAGVKIQFKPDDGTGPEKIAHIMGPPDQCQHAASIITDLLQSIRAREEGGQGGPQ
GPGGGMPPGGGRGRGRGQGNWGPPGGEMTFSIPAHKCGLVIGRGGENVKSINQQTGAFVE
ISRQPPPNGDPNFKMFIIRGSPEQIDHAKQLIEEKIEAPLCPVGGGPGPGGPGGPGGPGG
PIGPYNPNPYNAGPPGGASHGGSPGGPQYCPQGWGGNYQQWQAPGAHDPGKAAAADPNAA
WAAYYAQYYGQQPGGAMAGQNPGAPAAAAPGDQGQAPQASGGQPDYTKAWEEYYKKMGMA
QPGGGAGAAPGAAAAVAPAAAAPGGAAGGQQDYSAAWAEYYRQQAAYYGQPGQAPGQAAP
PQQGQQPQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattacggcggtctgccgacgaacggagtcggcgctgggatgaaaaacgacgct
tttgctgatgcagtacaacgagcccgacagattgcagctaaaatcggtggagacggcgtt
tcctcagtgagcaacaacggaggagctgagaactatccattcacatcacagaagagatcc
ctggaagaagcagatgagcccgatgccaagaaggtagcatcacagggtgaaattgattct
gcaatgtctattggagctcagctggcggccctgtcccaacaaagtgtcagaccctcgaca
atgacggaagagttcggggtgcctgatggcatggttggtctcatcataggccgaggagga
gaacaaatcaacaaaattcagcaggattctggctgcaaggtccagattgcgcacgacagc
gctggtcttccagacagaactgtttctctgaccgggtcaccagatgccatacagagagcc
aaggcccttatagatgacatcgtgtcaaggggccatgaggcgcctaatgggcagtcgggt
tccatgcaggagatgatcatccctgcaggcaaggccggccttattatcggtaaaggagga
gagaccatcaaacagctacaggagcgggctggagtgaaaatgattcttattcaagatgga
tcccagccacccaacatagataaacccctacgcatcattggagacccctacaaagtgcag
caagcaaaggacatggttaatgagattctacgagacagggatcatgctggctttggagac
cggaatgaatacggaccaaggatgggagggggaggcggcggaggaggagggggggcggta
cagatcgctgttcctcgccactccgttggagttgtaattggccgaagtggggagatgatc
aagaaaatccagagtgatgctggagtgaagatacagtttaaaccagatgatggtacaggt
cctgaaaaaatagcccacattatgggtccaccagaccagtgtcagcatgctgcttcaatc
atcactgacctgctacagagcatccgtgcccgagaggagggtggacaggggggcccgcaa
ggtcctggtggagggatgccgcctggtggggggcgtggacgaggtagaggccaggggaac
tggggtcctccgggaggagagatgaccttctccattcctgcccacaaatgtggactggtc
attggcagaggaggagaaaatgtcaagtccatcaaccaacagactggtgcatttgtggag
atatctcgtcagccaccaccaaacggtgaccctaacttcaaaatgttcatcatccgaggg
tccccagaacaaattgaccacgcaaagcagctcattgaagagaagattgaggctccattg
tgtccagtggggggtggtcctggtccagggggtccagggggcccaggtggtcccggtggt
ccaatcggtccctataatccaaacccttataatgcagggcctcccggtggtgcttcacac
ggaggctcgcctggtggcccccagtactgtccacagggttggggaggcaactaccagcag
tggcaagccccaggtgcacatgacccaggtaaggcggcggcagcagacccgaacgcagca
tgggcggcatactatgcacaatattatggccaacagccaggaggcgccatggcaggccag
aatcctggagcccctgcagcagcagcaccaggggaccagggccaagcgccacaggcttct
gggggccagccagactacactaaagcttgggaagagtattacaagaagatgggcatggcc
cagccaggtggaggggctggagccgctccaggtgcagcagcagcagtcgccccagcagca
gcagcacctggaggagcagctggaggccagcaggactacagtgctgcctgggctgagtac
tacagacagcaggctgcctactatggacagccaggacaggcgcctggacaggcagctcct
ccacagcaaggacaacagccccagtaa
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