Anoplopoma fimbria (sablefish): 129095530
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Entry
129095530 CDS
T09102
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04144
Endocytosis
afb04517
IgSF CAM signaling
afb04530
Tight junction
afb04810
Regulation of actin cytoskeleton
afb05100
Bacterial invasion of epithelial cells
afb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129095530 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129095530 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
129095530 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
129095530 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129095530 (arpc1a)
05100 Bacterial invasion of epithelial cells
129095530 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129095530 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129095530 (arpc1a)
Membrane trafficking [BR:
afb04131
]
Others
Actin-binding proteins
Arp2/3 complex
129095530 (arpc1a)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
129095530 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
WD40_Gbeta
EIF3I
Beta-prop_HPS5
Beta-prop_EML
RMC1_N
Rax2
Beta-prop_IFT122_1st
Tricorn_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
129095530
NCBI-ProteinID:
XP_054459984
LinkDB
All DBs
Position
9:7137787..7145361
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPVRSTILSLDWHPNNILLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QLKTEFLPLLNVIFVSENSLVAAGHDCCPMLFRCDDGGTLTFVSKLDLPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKRECRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcagttcctgttggaacccatcacctgccacgcgtggaaccgcgatagg
acacaaattgccatcagtccaaataaccatgaagtccacatctacaagaagagtggcaac
cagtgggttaagactcatgaattgaaggagcacaatggacacataacaggtattgactgg
gctcccaaaagtgaccgtatagtgacatgtggagcggaccgtaacgcctatgtgtggtcc
cagaaggaaggggtatggaagcccacactggtcatcctcaggatcaaccgagccgccacc
ttcgtcaagtggtctccgctggagaacaagttcgcagttgggagtggcgctcgactcatc
tctgtctgctactttgagtctgagaatgactggtgggtgagcaagcatatcaagaagcca
gtacgctccaccatcctcagtttggactggcatcccaacaacatcctgttggctgccgga
tcctgtgactttaaatgcagggtgttctcagcctacattaaggaggtggaagagaaacca
ggcccgacaccctggggcagcaagatgccatttggggctgtgctagcagaatttggagga
gcgggtggagggggttgggtccactctgtgtctttctcagcatctggaaaccgcctggcc
tgggtcagccatgacagcactgtcaccgtggtggacagctccaagactgccagtccttca
cagctgaagacggagttccttcctctcctcaatgtcatatttgtttcagagaacagtcta
gtagctgcgggccacgactgttgccccatgctgttccgttgcgacgatggtggaacgctg
acatttgtgtcaaagctcgacctccccaagcagagcatccagaggaacatctccgccatg
gagcgcttcaggaacatggacaagagagccaccaccgaggaccgcaacaccgccctggac
acactgcaccagaacagcatcacccaagtgtctatctatgaaggagacaaaagggaatgt
cgcaagttctgcaccacaggcatcgatggagcaatgaccatttgggacttcaagagtcta
gaagcttctatccagggtctccgcatcatgtga
DBGET
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