Anoplopoma fimbria (sablefish): 129095545
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Entry
129095545 CDS
T09102
Symbol
ptprdb
Name
(RefSeq) LOW QUALITY PROTEIN: protein tyrosine phosphatase receptor type Db
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129095545 (ptprdb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129095545 (ptprdb)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129095545 (ptprdb)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
129095545 (ptprdb)
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
129095545 (ptprdb)
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
Type II RPTP family
129095545 (ptprdb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
PTP-SAK
V-set
Tc-R-P
DSPc
PTPlike_phytase
Y_phosphatase3
PTP-NADK
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
129095545
NCBI-ProteinID:
XP_054460006
LinkDB
All DBs
Position
9:20825833..20917012
Genome browser
AA seq
1944 aa
AA seq
DB search
MHVSTYPMMHSASPGLLLLSFLFLADADSPPRFTRIPEDQTGVQGGVASFVCQASGDPQP
KIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECHTSNSVGEITATTRL
SVLREDQLPSGFPTIDMGPQLKVVERSRTATMLCAASGNPDPEITWFKDFLPVNTSNNNG
RIKQLRSESFGGTPIRGALQIEMSEESDQGKYECVATNSDGTRYSTPANLYVRELREVRR
XPPRFSIPPADSEIMPGGNVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELTD
VRQSSNYTCVAMSTLGVIEAVAQIIVKALPKAPGNPVVTERTATSITLTWDSGNPEPVSY
YIIQHRAKGSEDPYKEIDGIATTRYSVGGLSPYSHYDFRVAAVNTIGQGPSSEVVEARTA
EQAPSSPPRQVRGRMLSTTTAIIHWDEPEEPNGQVVGYRVYYTSDNMLPVNQWEKQMVRS
ANFITIQGLTPNKTYYIRVLAFTSVGDGPLSQDLQIIAKTGVPSQPSEFKGEAKSETSIL
LSWVAPPQGGPDNQITGYELVYRRADDTEEKKVSFEPTTSYLLKNLKPFSTYTFQLAARS
KHGIGAYTNEVAIDTPQTLPSAPPQDITCTSPSSTSILVSWAPPPLEFQNGIITGYTIQY
STTEGTKISKSVDGIPPESSPYLLENLEKWTEYGITVRAQTEAGDGPESLQLLIHTEEDV
PSGPPRGVEAETVNASAVRVKWRAPAPERQHGQVRGYQVHYVRMNYGEPQGQPFIKDILM
EDSQWEYGDSAEYEVVLGDLKADTAYSVSVGAYTAKGDGARSKPVTVCSALPLPQKPKLT
VSATVSGTALLQWYPPPNPPTPLLGYRLTFGRVDVLPFTVVEFPTKENRYTAQDVHKGAN
YVFRLSSRNKMGYGEEAVKELTTPEDSPCGYPENIILEEASADSIRLGWKSVPLIEQNGK
ITKYSVLYKDINSRGNASEVVVPTPGASVLLEGLSADTVYEVRLSAFTAVGPGPFSPSVQ
FRTQRLDQVFATNFRVKAAMKNSVLLSWEIRDKNPSQPFTILYGKGQSVEVDGKQTQKLI
TGLESDTQYSFLLTNRANSAGGLQHRVTATTAPDILKTKPMVVGKTNADGMVTVQLPTVQ
TTAKVRGYYVVVLPLKKQRGGKFQNPWEEPDQMNLDELLKEINRTSVSRALRIRRQAGQS
DPRAYVTAHFKTLPLEFTLGDGRNYGDFRNRPLQNGQEYVFFVLALLDLSENTMYATSPY
SDPVTSSDVDPQPIVDEEEGLLWVVGPVLAVIFIVCIVIAILLFKSKPDRKRAEAEGRKG
SFPCSKAMSSHHPTDPVELRRINFQTPAYRVSVYRGYRRLSSMASHPPVPISELTDHIER
LKANDNLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILSSIEGVPGS
DYINANYIDGYRRQNAYIATQGSLPETFGEFWRMVWEQHTANIIMMTKLEEKSRVKCDQY
WPTRGTETYGLIQVTLLDTVELATYSVRTFALYKSGSNEKREVRHFQFTAWPDHGVPEHP
TPFLAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVIDAMAERIKHEKALDIYGHVTLM
RSQRNYMVQTEDQYIFIHDALLEAVTCGNTEVPARNLYSYIQRLTQIEPGENVTGMEVEF
KRLASAKAHTSRFVSANLPCNKFKNRLVNIMPYETTRVCLQPIRGVEGSDYINASFIDGY
RQQKAYIATQGPLAETTEDYWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQY
FVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVH
KTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPATVQ
TEDQYQFCYRASLEYLGSFDHYAT
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgtcgacatatcccatgatgcactctgccagtccaggcctgctcctcctcagc
ttcctcttcctcgctgacgccgactcgccccccaggttcacgcgaatcccagaagatcag
acaggagtccaggggggagtggcctccttcgtgtgccaggcctcgggggatccacagccc
aagattgtctggaacaagaaaggcaaaaaagtcagcaaccagagatttgaggttatagaa
tttgacgacgggtccggctcggtcctgaggatccagccactgaggacccccagggatgag
gccatttacgaatgtcacacctccaactctgtaggagagatcaccgccaccacccgactg
agtgtgctgcgggaggaccagctgccctcgggcttccccaccatagacatgggcccccag
ctcaaagtggtggagcgttcccggacagccactatgctctgcgctgctagcggcaaccct
gacccagaaattacctggttcaaggatttcctgccagtcaacacgtccaataacaacgga
cgaatcaagcagctccgctcagagtcctttggtggcacgcccatacgaggtgccctccag
atagagatgagcgaggagtcagaccaggggaagtatgagtgtgtcgccaccaacagcgat
gggacacgctattccactccagccaacctctatgtcagagagctgcgagaagtgcgccgc
ngtccccctcgcttctccatccccccagcagacagcgagatcatgccgggggggaacgtc
aacatcacctgcgtcgccgtcggctccccgatgccgtacgtgaagtggatgctgggggca
gaggacctgacgcccgaggacgacatgcccatcggccgcaacgtcctggagctgacggac
gtgcgccagtccagcaattacacctgcgtcgccatgtcgacgctcggcgtgatcgaggcg
gtggcgcagattatagtgaaagccctgccgaaggcccctggtaaccctgtggtgacggag
agaactgcaacgagcatcacactcacctgggattctggcaaccctgagccagtctcctac
tatatcatacagcaccgggccaaggggtcagaggacccctacaaggagatcgacggcatc
gccacaacgcgctacagcgtgggcggcctcagcccgtactcccactacgactttcgggtg
gcggccgtcaacaccattggccagggcccctccagcgaggtggtggaggctcgcacagcc
gagcaggccccctcgtcacctcctcgacaggtcagaggtcgtatgctgagcaccacaaca
gcgatcatccactgggatgaaccagaggaacctaacggacaggtggtgggctacagagtc
tactacacctcagacaacatgctgccagtcaaccagtgggagaagcagatggtgcgcagc
gccaacttcatcaccatccagggtttgactccaaacaagacgtattacatcagagtgctg
gccttcacctctgtaggagacggacccctgtcccaggacctgcagatcatagccaagact
ggagttccatcccaaccttcagaatttaagggcgaggccaagtctgagaccagtatcctg
ttgtcctgggttgccccaccacagggtggccccgacaaccagatcacgggatatgaactg
gtctaccgacgagctgacgacacagaggagaagaaagtgagctttgagcccaccacctcc
tacctgttgaagaacctgaagcctttctccacctacaccttccagcttgctgccaggagc
aagcatggaatcggggcgtacaccaacgaggtggccatcgacacaccacagacgcttcct
tcagcgcctccccaggacatcacgtgcaccagtcccagctctaccagcatcctggtaagt
tgggccccgccccccctggagtttcagaacggcatcatcaccggatataccatccagtac
tccactacagagggtaccaaaatatctaaaagtgttgacggaattcctccggagagttct
ccgtatctcctggaaaacctggagaaatggactgagtatggcataacggtacgggcccag
acggaggctggggatggaccggagagcttacagctgctcatccacaccgaggaagatgtt
ccaagtggtcctccgcgaggggtggaggcagagactgtgaacgcctcggccgttagggtg
aaatggcgcgcaccagcgcccgagcggcagcacggtcaggtccgaggctaccaagtccac
tatgtgaggatgaactacggagaacctcagggtcagccgttcatcaaggacatcctcatg
gaggactctcagtgggaatatggtgactcagctgaatatgaggtggttctcggggacctg
aaggcagacactgcctactctgtatcagtgggggcttacaccgccaagggcgatggtgct
cgcagcaaacctgttaccgtctgcagcgccctgccactgccccagaagcccaaactgact
gtgagcgccaccgtttcaggcacggccctgcttcagtggtacccgccgcccaacccgccc
accccgctcctggggtaccgcctcaccttcggacgtgtcgacgtcctccccttcacggtg
gtggagttcccaaccaaggagaaccgctacaccgcccaggacgtccacaagggagccaac
tacgtgttcaggctctcctcccgtaacaagatgggctacggcgaggaggccgtcaaggag
ctgaccactccggaggactccccatgtggatacccagaaaatattatcttggaggaggcg
tctgccgactcaatcagactggggtggaaatcagtcccgctgattgagcaaaacgggaaa
attaccaagtactcggttctgtacaaagacataaacagtcgagggaacgcctcggaagtc
gtggtgcccactccaggggccagtgttttgttggagggcctgagtgccgatacagtgtac
gaagtcaggttgagcgcgttcacagctgtcggccccgggccgttcagccccagtgtccag
tttaggactcagcggctagaccaagtttttgccaccaacttcagagtaaaagctgccatg
aagaactctgttctgctgtcctgggagatccgagacaagaacccctcccagccgttcacc
atcctgtatggaaagggccagtccgtggaggtggatgggaagcagactcagaagctgatc
actggtttggagtcggacacgcagtactcctttctgctcaccaaccgggccaacagcgcc
gggggtctgcagcaccgcgtcaccgccaccaccgcccccgacatcctgaagaccaaaccc
atggtggtggggaagaccaacgcagacggcatggtgactgtgcagctaccgactgtgcag
accacagccaaagtcaggggttactatgtggtggtgctgccactgaagaagcagagagga
ggaaagttccagaatccctgggaggagcccgaccagatgaacctggatgagctcctgaaa
gagatcaacaggaccagtgtcagtcgcgccctccgcatccgcagacaggccggccaatca
gatccgagggcctacgtcaccgctcacttcaagaccctccccctggagttcacgcttggc
gacggacgtaactacggcgacttccgcaaccgtccgctgcagaacggacaggagtatgtt
ttctttgtgcttgcgctgttggacctctctgagaacaccatgtacgccacaagcccttat
tctgatcccgtgacctcatcggatgtggatcctcagccgatcgtcgacgaggaagagggt
ctgctgtgggtggtggggccagtgctggctgtcatcttcatcgtctgcatcgtcatcgcc
attctcctgttcaagagcaaacctgacaggaaaagggccgaggctgagggcaggaagggc
agtttcccctgcagcaaagccatgtcgtcccatcatcccactgatccagtggagctacgc
cggatcaacttccagaccccagcctaccgtgtatcagtgtaccgcggttatcgacgtttg
tcaagcatggcaagtcacccgcccgtccccatctctgagctaacagatcacatcgagcgc
ctcaaggcgaacgacaatctcaagttctctcaagagtacgagtccatcgaccccggtcag
cagttcacttgggagaactccaacttggaggtcaacaaaccaaagaaccgctatgctaac
gtcattgcctatgatcactccagggtcatactctccagcattgagggtgtcccgggcagt
gactacatcaacgccaactacatcgacggctaccgccgtcagaatgcctatatcgccact
cagggatccctccctgagactttcggggagttctggaggatggtctgggagcagcacacg
gctaacatcatcatgatgaccaagctggaagagaagtcacgggtgaagtgcgatcagtac
tggccaacgcggggcacagagacatacggcctcatccaggtcactctgctggacacagtg
gagctggccacatattctgtcaggaccttcgctctctacaagagcggctccaatgagaag
cgtgaggttcgtcacttccagttcacagcctggccggaccacggggtgcctgaacacccc
actccgttcctggccttcctacgtagagtcaaggcctgcaaccctccagatgccggtccc
atggtcgtccattgcagtgctggagttggtcgcacaggctgcttcatcgtgatcgacgcc
atggcggagcgaatcaagcacgaaaaggccctggacatctacggccacgtcacgctgatg
cgctcccagaggaactacatggtccagacggaggaccagtacatcttcatccatgatgca
ctgctggaggccgtgacctgcgggaacacagaggtccccgcgaggaacctgtactcctac
atccagaggctgacgcagatcgaaccaggggagaatgtcaccggcatggaggtggagttc
aagcgtctggccagtgccaaggcccacacatcacggttcgtgagtgccaacctgccatgc
aacaagttcaagaaccggctggtgaacatcatgccctacgagaccacgcgagtgtgcctg
cagccaatcagaggagtggagggatcggattacatcaacgccagcttcatcgatggatac
aggcagcaaaaagcctacatagcaacccaaggcccactggctgagaccacagaggactac
tggaggatgctgtgggaacacaactccaccatcgttgtcatgctaaccaaactgagagaa
atgggacgggagaagtgtcaccagtactggcctgcagagcgctcagccaggtaccagtac
tttgtggtggatcccatggctgagtacaacatgccccagtacattctgcgagagttcaaa
gtcactgatgccagggacggccaatcacggacagttcgtcagttccagttcactgattgg
ccagagcaaggagtgccaaagtcaggggagggtttcattgatttcattggccaggtgcac
aaaactaaagaacagtttggccaggacgggccaattactgtgcactgcagtgctggagta
ggcaggaccggtgtgttcatcaccctcagcattgttctggagaggatgaggtacgagggg
gtggtggacatcttccagactgtcaagatgctgcgcacccagagacctgccaccgttcag
acagaggaccagtaccagttctgctaccgggcgagtctggagtacctgggaagctttgat
cactatgcaacataa
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