KEGG   Anoplopoma fimbria (sablefish): 129095631
Entry
129095631         CDS       T09102                                 
Symbol
pcdh7a
Name
(RefSeq) protocadherin-7
  KO
K16498  protocadherin delta 1
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    129095631 (pcdh7a)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:afb01009]
    129095631 (pcdh7a)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:afb04515]
    129095631 (pcdh7a)
Protein phosphatases and associated proteins [BR:afb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129095631 (pcdh7a)
Cell adhesion molecules [BR:afb04515]
 Cadherins
  Protocadherins
   129095631 (pcdh7a)
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_2 RET_CLD1
Other DBs
NCBI-GeneID: 129095631
NCBI-ProteinID: XP_054460125
LinkDB
Position
9:complement(20196751..20234525)
AA seq 1375 aa
MQGLGAVHSSAAQALSLVVLVLLRLLTQLPGADSALRYRVAEEGPPDVKIGNVAADLGLT
AGTGNGDVTFALESGSEFFKIDNVTGELTTGTRRIDREKLSQCQMIFDENECFLDFEVSV
IGPLQSWVDLFEGRVVITDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDRDFGRNG
IDRYELIQDGASGTSSTRRTAPGSTIARVEGLGDRRGRSGDSGGGPRSTVFELQVADIPD
GEKQPQLIVKGTLDREQKDSYELVLRVRDGGNPPRSSQALLRVSITDVNDNSPQFERSTY
EAEMAENAPPGTPVLQVRASDRDIGVNGQVEYVFGAATESVRRLLRLDEATGWLSVLHRI
DREDVAQLRFTVTARDRGQPPRTDRTTVILAVRDENDNVPVVEIRKIGRIPVRDGAALVP
ENVLVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALPPLPADEAFDRNKKK
YFLHTSALLDYEATKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPVFAQSVLEVHF
AENNSPGERVVTVVASDADSGKNSEIAYSLDPAGNGPFYIDADNGDIRATGVLDRELRER
YELRVIAKDKGTPSLQGSATVVVQVTDRNDNAPKFVQEIFTFYVKENLLANSPVGMVTVT
DADEGENAELSLFVEMDGVDEKKAGEKVEGEDGEKEEEEVFSIENNTGTIFSAASFDREK
LSTYTFRVRAVDGGEPRKTATATVSLIVTDENDNAPSVTSPANESYTLLPPASSARTIVR
TVTAIDSDTGPNADLRYALVGGNPFRLFEIGHTNGVITLAEPLERRHRGLHRLVIRVNDS
GAPSLCTTALVHIFINESLANATLVDAQVARSLMAPLSLDIAGDPDSERALGKQRLSVAI
GVLAGAAAVILVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPPGAQPQAGRGRGSDRG
RKPRRDKRNGSGSSVVAGGGKADRSLYSGIVTVNGLRRHANDDDEEDLSSASERLAARYC
AMDGDPGSPRMGGGRRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQDLPPSN
TFVGSGGCVGSAGSSSSSSGGSGNADAMSLGSDQCSEYGCQTGNKYSKQGTLRRVTFSVV
SQPQDGGCYDSGLEDSETPSSKSSSGPRLGALPLPEEGYERTTPEGSVGEEEHVENDARQ
LPDVALTGKCTRECDEFGHSDTCWMPVRPSPRQRQRHGSDPPRLSTFAPGDDNNNLRGND
HESDSESAGSAGSSEPGMGVGGEGQRLPLANGDPLGTLGGGDRNRNMGDHNRNLLNRKMT
SASYDTFSSAGFGRRQQEEEGGEGQNPTEVIPLTRTGGDYKTTSCLTLSRREVYL
NT seq 4128 nt   +upstreamnt  +downstreamnt
atgcaggggcttggcgcagtgcactcctccgcggcgcaggctctcagcctcgtggtccta
gtgctgctgcggctgctgactcagctgccgggcgcagactcagccctccggtaccgggtg
gcggaggagggcccgcccgacgtcaagatcggcaacgtcgccgccgacctgggcctgacg
gcgggcaccgggaacggggacgtcaccttcgccctggagagcggctctgagttcttcaag
attgacaacgtgacaggtgagctgacgactggcacgaggcgcatcgaccgcgagaagctc
tcccagtgccagatgatatttgacgagaacgagtgcttcctggacttcgaggtgtcagtg
attggccctctgcagagctgggtggacctgttcgagggccgggtggtcataacagacatc
aatgacaacacaccttccttcccctcacctgtgctccagctttcggtggaggagaaccgc
ccaataggaaccctttacctgctgcccacagcgaccgaccgggatttcggacggaacggc
atcgaccggtacgagctgattcaggacggtgcgagtgggacgagttcaacgagacgcacg
gctccaggatctaccatcgctagagtggaggggctcggggaccgtaggggtaggagcggt
gatagcggaggaggacccagaagcactgtgttcgaactgcaagttgcagatataccagat
ggcgaaaaacaaccgcagctcattgtgaaaggcacgttggatcgggagcaaaaggactcc
tacgagctggtcctcagggttcgagatggggggaatccgccgcgttcctcccaagccctg
cttcgcgtttccatcaccgatgtgaacgacaacagcccacagttcgagaggtccacgtac
gaggcggaaatggctgaaaatgcccctccaggtacgccagtcctccaggtgagagcttca
gaccgcgacattggagtcaacgggcaggtggagtacgtctttggagcagccaccgaatcc
gtccggcgtctcctgcgcctggacgaggccactggatggctgagcgtcctccacaggatc
gacagggaagacgtggcacagctgaggttcacggtgacggccagagaccggggtcagcct
ccccgcaccgaccgaaccaccgtgattttggctgtccgggatgaaaacgacaacgtaccg
gtggtggagatccggaagatcggacggatcccagttcgtgatggagcagcgttagtgccg
gagaacgtcctggtggacaccccagtggctctggttcaggtgtcggaccgggaccaggga
gagaacggcgccgtgacgtgcacagttgtgggagacgtcccattcacgctgaagccggct
ggagaaacggccctcccacccctacctgcagacgaagcctttgacaggaataagaaaaaa
tacttcttacatacttccgccttgctggactacgaggccaccaaagagtacagtgttacc
attgtggcagtagattccggcagcccaagcctgtccagcaacagctcgctgatggtgcga
gtggtagatatcaatgaccatgccccagtctttgcccagagtgtcctggaagtccacttt
gctgagaacaactcacctggggaaagggtagtcactgtggtagcctcagatgcggacagc
ggcaagaattcggagattgcgtactctctggaccctgctggaaacgggccattctacatc
gatgcagataatggagatatccgtgccactggggttctggaccgcgagctgcgagagagg
tatgaactccgggtgattgccaaggacaagggcacgccttccctgcagggctctgcaact
gttgtggttcaggtgaccgaccgcaacgacaacgcgccaaagtttgttcaggaaatcttc
acattctacgtgaaagagaacctgctcgccaacagcccggtcggcatggtcaccgtgacc
gatgccgacgaaggcgagaacgcagaactcagtctgtttgtggagatggatggagtcgat
gagaagaaggcgggagagaaggttgaaggagaagatggcgagaaagaagaagaggaggtg
ttttccatcgaaaacaacacgggaactatcttctctgctgcgtcgtttgaccgggaaaag
ctttccacctacaccttccgtgtccgcgctgtggacggaggggagccacgcaaaaccgcc
accgccacagtctcgctcattgtgacggacgaaaacgacaacgccccctccgtcacttcc
ccagccaatgagtcctacaccctccttccacccgccagcagtgcccggaccatcgtcagg
actgtgacagccatagactcagacaccggccccaatgcagaccttcgctatgcccttgtc
ggggggaatcccttccgactgtttgagatcggccacaccaacggggtgatcacccttgct
gaacctcttgagcggcgccacagaggcctgcatcgcctggtgatccgggtcaatgacagc
ggggccccctccctctgtaccaccgccctggtccacatcttcatcaacgagagcttggcc
aacgccaccctggtggatgcacaggtggcccgaagtctcatggctccactgtccctggac
atcgcaggggacccggacagcgagcgcgcgttggggaaacagcgcctcagcgtggccatc
ggcgtcctggcgggagccgcggcggtcatcctggtcatcctgctcgtagtcacggctcgg
cagtgcggcgctcagggcaagaacggctacgaggccggtaagaaggagccagaggaggac
ttcttcagtcctccgggggctcagccgcaggccggacgcggtagggggtcggaccgcggc
cgcaaaccccgacgggacaagcgcaatggaagcgggagtagcgtggtggctggaggaggc
aaggcggacagatccctctacagcggcatcgtcacagtcaacggactgcgtcggcacgcc
aacgacgacgacgaggaggatctgagcagcgccagcgagcgcctggcggcccggtactgc
gccatggacggcgaccccggcagcccgcggatgggcggcggcaggaggcatcagtcaagc
ccggatctggccaggcactacaaatccagctcgcctctccccgcggtgaacctgcagcca
cactcccccccagccgagggcaagaagcaccaagcggtccaggacctgccgccctccaac
acctttgtgggcagcggcggttgcgtggggagcgccggctccagcagcagcagcagcggc
ggcagtggcaacgcggacgccatgtccctgggatctgaccagtgctcggagtatggctgc
cagaccgggaacaagtacagcaaacagggaacccttcgccgggtgaccttctccgtagtc
agccagccccaggacggcggctgctacgacagcggcctggaggactcggagacgccgagc
agcaagagctcgtcggggcctcggctcggagcgctgccgctgccggaggagggctacgag
aggaccacaccggagggcagcgtgggggaggaggagcatgtggagaacgatgccagacag
ctgccagatgtcgctctgacagggaagtgcaccagggagtgtgacgagttcggccactca
gacacctgttggatgcccgtccgcccttcgcctcgccagcgccagcgccacggcagcgac
cccccgcggctctccaccttcgcccccggggacgacaacaacaacctccgcggaaacgac
cacgaaagcgacagcgagagcgccggcagcgcggggagctcggagcctgggatgggcgtg
ggcggagaaggtcagaggctacccttggccaacggcgatcccctcggcaccctggggggc
ggagaccgcaacaggaacatgggcgaccacaaccgcaacctcctgaaccgcaagatgacc
tcggcgtcctacgacacgttcagcagcgcgggcttcgggaggcgccagcaagaggaggaa
ggaggagagggccagaacccgaccgaggtcataccgctgacgcgcacgggaggcgactac
aagaccacgtcctgcctcacgctgtcccgccgagaggtctacctgtga

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