Anoplopoma fimbria (sablefish): 129095634
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Entry
129095634 CDS
T09102
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129095634 (shoc2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
129095634
NCBI-ProteinID:
XP_054460127
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Position
9
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AA seq
582 aa
AA seq
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MSSTLGKEKDSKEKDPKGGPAGKEREKEARALAGLVKDGGKETKTKGKDAKEGKKDTSSS
TPGVAFSVDNTIKRPNPAAGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPTSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKMLRMLDLRHNK
LREIPAVVYRLTTLATLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCSL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKEIQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcgaaagaaaaggaccccaaaggtggtcca
gcggggaaagaaagggaaaaggaggccagggctctagccggcttagtcaaggatggtggc
aaagaaacgaagaccaaagggaaagatgccaaagaaggaaagaaggacaccagcagctca
acaccgggtgttgccttctcggttgacaacacgataaagcggccaaacccggcagcgggt
acgcgcaagaagtccagcaatgccgaggtgatcaaagagctcaacaagtgccgggaggag
aactcaatgagactggacctatcgaaacggtccattcacatcttgcccacctccattaag
gagctgacacagctggctgaactctacttatacagcaacaagctgcagagcctgccagct
gaggtgggttgcctatcaggcctggtcacgttggccctgagcgagaactccctgaccagt
ttgcctgactccctggactctcttaagatgcttcgaatgctcgacctccggcacaacaaa
ctcagagagatacccgctgttgtctaccggctgacaactcttgccacgctgtacctgcgc
ttcaaccgcatcacaacagtggagaaggacatccgaaacctatccaagctcaccatgctc
agcattcgtgagaacaagattaaacagctgcccgcagagataggagagctatgcagcctc
ataactctggatgttgcccataaccagttggaacacctaccgaaggagattgggaattgc
acacagataaccaacctcgacttgcagcacaatgagctcttggacctcccagagactata
ggcaacctggcaagcataaatcgcttaggtctgcgatacaatagattgtcagccatcccc
agatcattagccaaatgtcgagaactggaggagctaaaccttgaaaacaacaacatttcg
gtgttgccagagggcctactgtcaagtttagtcaacctgactagtctaacactggcgagg
aactgcttccagtcgtaccctgtgggtggaccatcccagttctccaccatctattccctc
aacatggagcacaaccgcatcaacaagatccccttcggcatcttctccagggccaaagtg
ttaagcaagcttaacatgaaggacaaccagttaacatctctcccattggactttggcaca
tggaccagcatggttgagcttaacctggcaaccaaccagctgacaaagatcccagaggac
gtctgtggtctagtctctctggaggtgttaatactgtccaataatcttctcaagaagtta
ccacatggtattggaaatttgagaaagctacgggagctggacttggaggaaaacaaattg
gaatctctacctaatgaaattgcttatctgaaagaaatacagaaattggtgttgacaaat
aatcagctgaccacgttacccagaggcatcggccacctcaccaacctgactcatcttggt
ttgggggagaacctgctgcaacacctcccagaggagattggtacactggagaacctggag
gagctgtacctcaacgacaatcccaacctgcacagcctaccgttcgagctggccctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcagccacctgccaccacagatt
gtcgcgggaggcccctccttcatcatccagttcctcaaaatgcagggaccatatcgtgcc
atggtctga
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