Anoplopoma fimbria (sablefish): 129095651
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Entry
129095651 CDS
T09102
Name
(RefSeq) RNA exonuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129095651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afb03009
]
129095651
Ribosome biogenesis [BR:
afb03009
]
Eukaryotic type
Pre-60S particles
RNases
129095651
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
Motif
Other DBs
NCBI-GeneID:
129095651
NCBI-ProteinID:
XP_054460152
LinkDB
All DBs
Position
9
Genome browser
AA seq
820 aa
AA seq
DB search
MNFEPVGSITSVETSDDLSSAAETCNRKKRKSVAPTAHEGSKRLKTVPDGEETQTCGRPQ
SISVLPDSLQQPITPDELNQLLHYAALGKTGGIEQPSWCRLHHQKRVKAVNVVIVEGLTQ
SDFYKHYLTLRHLRTNYTTRVTFTPSATNLASGIFSGEIPESRASSVYERLNRSSELDNA
MTLHPVITKFGTKKRGLTAYVLSQEEMIKRHFPVKGMPGVEDFVCTDGVDCVTDRSPLYG
LDCEMCFTERGNELTRVSLVDSDGNCLLDELVKPQNRILDYLTRFSGITAAMLRPITTTL
RDVQVKLRKLLPSDAVLVGHSLNNDLVALKLIHQHVIDTSLLYRRDFGQKFKLKVLADVV
LQRQIQTAEKTGHNPTEDAVAALELAQYFIKKGPRQVVELYLEELWGITIKEEFFFDLEP
APKQSLRFADILQTFGRSVAFIGKRSDISLDPSNQHWLNYDKEVLDSFKRRTTFPFLSVL
QLPSFSDHLKRCCPHQEHQHQRVRSNLGDMCAVFAGPFPEGFSEGEVRRLFSCCGPVRNI
RMLTTTVRVHAEVEFELLEGAVLALKALNGLNMQGQSIKVQRPVNESMLDLDLTLDALMC
DGLNGSHLYAVKLNPSMAEGIRVSPQVNGHASDAECPGDPSVRAANGFPSVRVNGTSKLK
ASKKSKLSEETIRETFAHFGSVERVVLPAKCGKRARHAYIKFESSADRNVALGSSEELWK
ENYLVCPSLTPPHLTSWVAMTTPITAEDQDSEAEEEERSGTHASSQEQEMDLMMGQLDRR
LRKLFRSLPEGTLSVVVLPGNTSAHGQLPGLCLTEVKRGQ
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgagcccgtaggatccataacatctgtagaaacatctgatgatctttcatca
gcagcagaaacatgcaacagaaagaaaagaaaaagcgtcgcccccacagcgcacgagggc
tccaagagattaaaaactgtgccggacggtgaagagacgcagacgtgtggacgtccgcag
agtatctctgtgctgcccgacagcctccaacaaccaattacacccgatgagctgaatcaa
ctgctgcactatgccgctctggggaaaacaggtggcattgaacagcccagctggtgtcgt
ctccaccatcagaagagggttaaagctgtgaatgtggtgatcgtggaggggctgacccag
agtgacttctacaaacactacctcaccctgcggcacctcaggaccaactacaccactagg
gtcacctttactccatcagctaccaacctggcgtcaggaatcttcagcggtgaaattcca
gagtcgagggcttcatctgtttacgaaagactcaatagaagcagtgaattggacaacgca
atgacacttcacccagtaatcaccaaatttgggactaagaagagaggactgacagcgtat
gttctcagccaggaggagatgatcaagagacacttccccgtcaaaggaatgccgggcgtt
gaggactttgtgtgcacagacggtgttgactgtgtgactgaccgcagccctctgtatgga
cttgactgtgaaatgtgtttcacagaaagaggaaacgagttgactcgtgtctctctggtg
gacagtgatggaaactgtctgctggacgaactggtgaaacctcagaaccgaatactcgac
tacctcaccaggttctctggaataaccgcggcgatgttgcgaccaatcacaacgaccctg
cgtgacgttcaggtgaagctcaggaagttgttgccgagcgacgcagttctggtgggacat
tcactgaacaacgacctcgtggctctaaaactgatccaccagcacgtcatcgacacctcg
ctgctctacaggagagactttgggcaaaagtttaaactgaaggttctggcagacgttgtg
ctgcagaggcaaatacaaactgcagagaagacgggtcataatcccactgaggacgctgta
gcagctctggagctggctcagtattttatcaaaaaaggacctcgtcaggtggtagagctc
tatctggaggagctgtggggaattacgataaaggaggagtttttttttgaccttgaacct
gcacccaaacaaagtctcaggtttgcggacatattacagactttcggccggtcagtcgcc
ttcatagggaagcgttctgacatcagcctggatccgtccaatcagcactggctcaactat
gacaaagaggtgctggactccttcaagagacggaccacctttccgttcctctcggtgctc
cagttaccttccttctcggaccatctgaagaggtgctgccctcatcaggagcaccagcac
cagagggtgcgttcaaaccttggggacatgtgcgcggtgtttgccgggccgttccctgag
ggtttctctgagggggaagtgaggcggctgttcagctgctgtggaccggttcgaaatatc
agaatgttgaccacaactgtccgggttcatgcagaggttgagtttgagctgctggaggga
gctgtgctggctctaaaagcgttgaatggacttaatatgcagggacagtccatcaaggtc
cagaggcccgttaacgagtcgatgctggacctggatctgactctcgatgctttgatgtgt
gacggtctcaacggcagtcacctctacgctgttaagttaaaccccagtatggctgaaggc
attcgcgtttctccacaagtcaatggacatgcgtcagatgcagaatgtccaggtgacccg
tctgtcagagcggcgaacgggtttccttcagtgagagtaaacggcacgtcgaagctcaag
gcctctaaaaagtctaaactgtccgaggagacgatcagagagacattcgctcacttcggt
tcggtggagagagtcgtcctgccggccaagtgtgggaaacgtgcacgacatgcatacata
aagtttgagagctcggcggatagaaacgtggccctcggctcctctgaggaactctggaag
gaaaactacctcgtctgtccatccctgactccgccccacttgacctcatgggttgccatg
acaacgccgatcacggcagaggatcaggacagcgaagcggaagaagaggagaggagcggc
acgcacgccagttctcaggagcaggaaatggatctcatgatggggcagttggatcgccgc
ctgaggaagctcttcagatctctcccagaaggcaccttgtccgtggtcgttctgcccgga
aacaccagtgctcatggacagctccctggtttgtgccttacggaggtcaaacgagggcag
tga
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