Anoplopoma fimbria (sablefish): 129095782 Help Entry 129095782         CDS       T09102                                  Symbol pcdh18a Name (RefSeq) protocadherin-18a   KO K16499   protocadherin delta 2 Organism afb  Anoplopoma fimbria (sablefish) Brite KEGG Orthology (KO) [BR:afb00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:afb04515]     129095782 (pcdh18a) Cell adhesion molecules [BR:afb04515]  Cadherins   Protocadherins    129095782 (pcdh18a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_2 PAG Cadherin_C_2 TMEM154 Calici_coat_C Motif Other DBs NCBI-GeneID:  129095782 NCBI-ProteinID:  XP_054460314 LinkDB All DBs Position 9:complement(29789800..29797528) Genome browser AA seq 1166 aa AA seqDB search MWKVLAVLTLATQHVTCKTVKYQVHEEQKVGTVIARLRDDVVDVLAKLPSSVSLRFRAMQ RGGSSFLAVREQDGEISIRTKIDREKLCEKNLNCSIQFDVLTLPTEHLQLFHVEVEVLDI NDNAPQFSRSVIPIEISESASVGARIPLDSATDPDVAENSLHTYSLEPNNFFKIDIQSRT DGAKYAELVVLRELDREVRSVYELQYTASDRGVPSRTGSTLLKISVSDSNDNSPVFEKSS YVINLPENAPVGTLLIDLNATDADEGTNAKIVYSFSSHVSPKIMETFKINPDSGRLTLIR RLDYEAVNSYDIDVQAQDMGPNSMPAHCKILVKVVDVNDNKPDISINLMSSQGNGDAAYI SEASPLDTFVALVRVEDLDSGLNGEVECKLHGQGFFKLQKSYENNYMILTNVSLDREKRS EFSLTVVAEDRGTPSLSTVKHFTVHVTDENDNPPRFEKGQYEIFKSENNAPGAYLTSIMA TDPDLDTNGQVSYSILENSVHGSSISTYVTIDPSNGAIYALRTFDREDVSRIAFVVQAKD AGKPLLLSNTTVILNILDENDNPPVIVVPQLWNFTADVHASKFTETGHLVTAVRATDRDT GVNAELICSIVSGNEEGFFSIDPRTCEIHANASLENFPHEHAELTIIVRDQGRESLSAKA AIKITLSENMENHVQVMDQGESTLDASRIIIISLATICTMLLIIMVVFAALCNREKKDTR HSYNCRVAESTHQHHPKKPSRQIHKGDITLVPTVNGTLPIRAHHRSPSATPPMDRAQMGS RQNHHSRQSLNSLVTISSNHIPESFALELAHATPPVEGQYQPRPSFRGNKYSRSYRYALQ DMDKFSLKDSGRGDSEAGDSDCDMGRESPVDRLLLGEGFSDLIHLEMHHRLHPAMRLCTD ECRILGHSDQCWMPPLSSPASCDYRNNMYIPGEESAQQPQLDDDQSSVDSERRKSFSTFG KESGNEEEGAGGVVAGGGSDACAAGGGAGSLLTEMNSVFQRLLPPNMDSYAECTETSPPS SSSTTERGSGRAGNVAGNHSNNAVPQDNRRGLLPGGKGPAYPPGVAAWAANTHYLNPGSG SAGTNHVSSSPSSSSSTSTSTSTNGQPPHLKWLPAMEEIPENYEEDDFDGVFHQGGKRSE SRHEAGMDASELVHEINKLLQDVRQN NT seq 3501 nt NT seq  +upstreamnt  +downstreamnt atgtggaaagttctggctgttctgacgctggcaacgcaacacgtcacctgtaagaccgtg aagtaccaggtccacgaggagcagaaggtgggcacggtcatcgcacgcctgagggacgat gtcgtggacgtcctcgctaaacttcccagctcagtgtctctccgcttccgagccatgcaa cgaggggggtcgtcgttcctggccgtgcgggagcaggatggagagatcagcatcaggacc aagatcgaccgtgagaaactctgcgagaagaatctgaactgctccattcaattcgacgtg ctgacactccccaccgagcacctccagctgttccacgttgaggtggaggttctggacatc aatgataacgcaccccagttctcccgcagcgtcatccccatcgagatctccgagagcgca tccgtgggagcgcgcatccctctggacagcgccacggaccccgacgtggcggagaactcg ctccacacctactcattagagcccaacaacttcttcaagatcgacatccagtccaggacc gacggggctaagtatgccgagctggtggtgctgagggagctggaccgggaggtgcgctcg gtttatgaacttcagtacacagcctctgacaggggcgttccctcgagaacgggttcgacc ctcctgaaaatcagtgtgtctgactccaatgacaacagcccagtttttgagaagtcatcg tatgtcattaatctgccagaaaacgcacctgttggcactttgctcatcgacctaaacgcc accgatgcggatgaaggcactaacgccaaaatagtctactcattcagcagtcatgtgtcg cccaaaataatggagacgttcaagattaaccccgacagcggccgcctgaccctcatcagg cgcctggactacgaggccgtgaactcctacgacattgatgtccaagcgcaggacatgggt ccgaactccatgccagctcactgcaagatcctggtcaaagtggtggatgtcaacgacaac aaaccagacatcagcatcaatctcatgtcctcccaggggaacggggacgcagcttacata tctgaggcttctcctttggacacgttcgtagccctggtgagggtggaggacttggactcc gggttgaatggagaggtggagtgtaaacttcatggtcagggatttttcaaactgcagaag tcctacgagaacaactacatgattttgaccaatgtgtctctggaccgagagaagaggtca gagttcagtctgacggtggtggcggaggacagaggcacccccagtctctctactgtcaaa catttcaccgtacacgtgactgatgaaaatgacaacccaccacgttttgagaagggccaa tatgagatcttcaaatcagagaacaacgctcctggagcatatctgacctccatcatggcc actgaccctgatctggacaccaatggacaagtgagctactccatcttggagaactctgtt catgggagctccatctccacctacgtcaccattgacccctcaaatggcgccatatatgca ctgcgtacatttgatcgcgaggatgttagccgcatcgcctttgttgtgcaagccaaagac gcggggaaaccactgctgctcagcaacaccacagttattttgaatattctggatgagaat gacaaccctccggtcattgtggtcccccagctgtggaacttcactgctgatgtgcacgcg tcaaagttcacagagactggacacttagtaaccgcggtcagggcgactgatcgcgacaca ggggtcaacgctgagctcatatgctctattgtcagtggcaacgaagagggcttcttcagt attgacccaagaacatgtgaaatccacgccaacgccagcctggagaacttcccccatgag cacgctgagttgacaatcatagtcagagatcagggacgggagagcctcagtgctaaggcg gcaataaaaatcaccctctctgagaacatggagaaccacgtccaggtgatggaccagggg gaatctactctggatgcatcccggatcatcatcatctccctggcgaccatctgcaccatg ctcttgatcatcatggtggtgttcgccgctctctgcaaccgggagaagaaggacacaagg cactcctacaactgtcgggtagcggaatcgacccaccagcaccatcccaagaagccctcg cgccaaatccacaaaggtgacatcaccctggttcccacggtgaacggcaccttgcctatt agagctcaccaccgctcgccttcggccacgccccccatggaccgagcccagatggggagc aggcagaatcaccacagccgccagtcactaaacagcctggtgaccatctcgtccaatcac attccagagagctttgcactggagctggctcacgcaactccaccagtggagggccagtac cagcccagacccagtttccgtggcaacaaatactcccgcagctacaggtatgcattacaa gacatggacaagttcagcctgaaagacagtggccgtggggacagcgaggcgggagacagt gactgtgacatgggtcgggaatcccccgtggacagactgctgctgggggagggcttttct gacctgatacacctcgaaatgcaccatcgactccacccagctatgagactgtgtacggat gaatgtcgcatcctgggacactctgaccagtgctggatgccccccctctcctcgccggct tcctgtgactaccgcaacaacatgtacatccccggggaggagtcggcccagcagcctcag ctcgatgatgaccagtcctctgttgactcggagcggcgcaagagcttctccacttttggc aaggagtctgggaacgaagaggagggggccgggggagttgtcgccggaggaggaagtgat gcttgtgcggctggaggaggggctggctccctcctcacagagatgaactctgtgttccag cggctcctcccccctaatatggactcatacgcagagtgcactgaaacaagcccaccctca tcctcgtcaaccaccgagagaggaagtgggcgtgctggaaacgttgcaggtaaccatagt aacaatgctgtccctcaagataaccggagaggattgttgccaggtgggaaaggtcccgct taccccccaggtgtggctgcgtgggcggccaatacccactatctaaatcccggaagcgga tcggcgggaaccaatcatgtctcctcctctccttcctcatcgtcctccacctccacttcc acctcaaccaacggacagccaccacacctcaaatggctgccagccatggaggaaatccca gaaaattacgaggaggacgactttgatggcgtcttccatcagggcggcaagcgaagcgag agccggcacgaggccggcatggacgctagcgagctggttcatgagatcaacaaactgctg caggacgtcagacaaaactag

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