Anoplopoma fimbria (sablefish): 129095790
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Entry
129095790 CDS
T09102
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00310
Lysine degradation
afb00514
Other types of O-glycan biosynthesis
afb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129095790 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
129095790 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
afb01003
]
129095790 (colgalt1b)
Enzymes [BR:
afb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
129095790 (colgalt1b)
Glycosyltransferases [BR:
afb01003
]
O-Glycan biosynthesis
O-linked Gal type
129095790 (colgalt1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
MT-A70
Motif
Other DBs
NCBI-GeneID:
129095790
NCBI-ProteinID:
XP_054460324
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All DBs
Position
9:26205360..26217888
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AA seq
609 aa
AA seq
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MPRVTSLLPALLSVLLPGPSWGYFPEERWSPESPLLAPRVVVALACRNSAHSLPLFLGAI
ERLNYPKERIALWVATDHNIDNTTAILRDWLVKVQNDYHYVEWRPEDEPRAFEDETGPKH
WNNLRYEHIMKLRQAALETAREIWADYLLVADCDNLLTNTDTLWKLMSENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYMPIRKQEHLGCFAVPMVHSTYLLDLQKEASRQLAFYP
PHPKYSWALDDVIVFAYSARMADVQMYVCNKETYGYVPVPMRSHGTLQDEVESFVHTQLE
IMVRNPPLEPSSFLSLPPKQPNKMGFDEVFMINLVRRSDRRERMLRTLYEQEISCKVVAA
VDGKALNKTDIESMRIKMLPGYKDPYHGRPLTKGELGCFLSHYNIWKEIADRGLQTSLVI
EDDLRFEVFFKRRLQTLLQEVTTHKLDWDLIYIGRKRMQVDHQEKSVPNIHNIVEADYSY
WTLGYLLSLQGAQKLLRAEPLNKLLPVDEFLPVMYDKHPVSEYMDHFESRDLRAFSAEPL
LVYPTHYTGDQGYISDTETSVVWDNETAKTDWDRAKSRKTQEQGELSFEAQNSDVLQSEL
ENWSARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccccgggtcacctctcttctgcctgccctgctgtccgtcctcctgccgggtccgagc
tggggatatttcccggaggagcgctggagccccgagtctccgctcctcgctccccgggtc
gtcgtcgctctggcctgccgcaactcagcgcactctctgccgctgttcctcggagccatc
gagcggctcaactacccgaaggagcgcattgctctgtgggtggcgacagatcacaacata
gacaacaccacggccatcctgagggactggcttgttaaggtgcaaaatgactatcactat
gtggagtggagacctgaagatgaacccagggcctttgaagatgagacggggcctaagcac
tggaataatctccgttatgaacacataatgaagctgcgtcaggcagcgctggagaccgca
cgtgagatctgggccgactacctgctggtggccgactgtgacaacctgctcaccaatacg
gacacgttgtggaaactgatgagcgagaataagaccattgtggcgccgatgctggagtcc
agagctgcctactccaacttctggtgcggcatgacttcacagggttactacaaacgtaca
ccggcctacatgcccatccgtaaacaggagcaccttggctgtttcgccgtaccgatggtc
cactccacctatctactggacctacagaaagaggcctcccgtcagctggctttttatcca
ccacacccaaagtacagctgggccctggatgatgtcatcgtctttgcctactctgctcgc
atggcagatgtgcagatgtacgtgtgcaacaaagagacttatgggtatgtcccggtgccg
atgcgttcccatggtaccctgcaggatgaggtggagagcttcgtgcatactcagctagag
atcatggtgagaaatcctccattggagccctccagcttcctgtctctccctcccaagcag
cccaacaagatgggctttgatgaggtgtttatgatcaatctggtgcggagatctgaccgt
cgcgagcgaatgctaagaactctgtatgagcaggagatcagctgtaaggttgttgctgct
gtggatggcaaagctctgaacaagactgatatagagtcaatgaggattaagatgctgccg
ggttacaaagacccttatcatggtcggcccctcacaaagggtgaactgggttgttttctc
tctcattacaacatctggaaggagatagcggatcgtggtctgcagacctccctggtcatc
gaggacgacctccgcttcgaggtgttcttcaagcgtcgtctccagacgctgctgcaggag
gtgacgacacacaagctggactgggatctcatttacattgggcggaagcggatgcaggtg
gaccaccaagagaagtctgtaccaaacatccacaatatagtggaggcggactactcctac
tggacactcggctacctgctgtctttacaaggagcccagaagctcctcagggccgaacct
ctgaacaagctgcttcctgtcgatgagttcctccctgtcatgtacgacaaacatccagtt
tcagagtacatggaccactttgagagtcgggacctgcgtgcgttttccgccgagccgctt
ctggtgtatccaacccattacaccggagaccagggctacatcagtgacacggaaacatcg
gtggtctgggacaacgagaccgccaaaaccgactgggaccgagccaagtccaggaaaact
caggagcagggggagctgagcttcgaggcccagaactctgacgtgctgcagtcagaactg
gagaactggagcgcacgggacgagctgtga
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