Anoplopoma fimbria (sablefish): 129095793
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Entry
129095793 CDS
T09102
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129095793
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129095793
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129095793
Intermediate filaments
Intermediate filament-binding proteins
129095793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PMC2NT
CAMSAP_CH
PH_11
CH_2
FERM_C1_MyoVII
DUF2383
Motif
Other DBs
NCBI-GeneID:
129095793
NCBI-ProteinID:
XP_054460327
LinkDB
All DBs
Position
9:95155..128011
Genome browser
AA seq
2343 aa
AA seq
DB search
MMTTVAAEFDHMELQQQYSSSNDTVNNRWDEEWDNENSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVD
KALQFLKEQRVHLENMGCHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKD
ALLLWCQMKTAGYPNVNIRNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNA
FNLAEQHLGITQLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNA
IETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFT
EKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRMELIRQ
EKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEER
VQAVVSVAKELEVERYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEM
LYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVSTNATKYPVN
DDGYKPCDPHVIQDRVSHLEFCYQELTQLAAERRTRLEESRRLWKFFWEMAEEEGWIREK
EQILSSVEHGKDLTGALRLLSQQRALEDEMSGRAGHLKHTIAEGQAMVQTDHFAATKIQE
RIDDLQAQWAALEQLAAVRRRKLEEALALHQFQVDADDIDAWTLDALRIVSSGETGHDEF
STQALFRKHKDAAAEVASYRPVIDSLHEQAALLPQEEAESEEVRGRLAGIEERHKEVTEL
TKLRKQALQDALALYKMFSEANACEVWIDEKEQWLNSMEIPEKLEDLEVVQHRFESLEPE
MNNQASRVAVVNQIARQLMHNGHPSEKDIKTQQDKLNNRWSQFRDLVDQKKESLNSALGV
QNYHLDCNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLVDLRG
EAERLAEEHPDQAKAITGRLAEITAVWEEMKNTLKNREESLGEARKLQQFLRELDDFQSW
LSRTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGDMVTQGQTDAQY
MFLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEM
PTTLEGAEAAIKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINAERIQERVASIDDRH
KKNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQ
AFMAELQSNKEWLDKIQKEGMLLVSEKPETEAVVKEKMAALHAMWEELESTTQTKAQCLF
DANKAELFTQSCADLDKWMGGLEGQIQSDDYGKDLTSVNILLKKQQMLEKQVEVRQKEVV
ELQTQVKALGQEVKDTEEVDGRRQLVEMKFQELLEPLRRRKNFLVESREVHQFNRDVEDE
ILWVQERMAVATSSDHGHNLQTVQLLIKKNQTLQKEIQGHQPRINDILERSQSLMKDEIR
QRLADLQELWRRLMEEAELRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDE
LSAVTMQKKHQIVEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSQVDKLYAGLK
DLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFA
RDTGNIGQERVDAVNRLADELINAGHGDAATVAEWKDGLNEAWADLLELIDTRTQILAAS
FELHKFYHDAKEILVRILDKQKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQ
EDAVRLQSAYAGDKADDIQRRESEVLEAWRSLLEACDGRRVRLLDTGDKFRFFSMVRDLM
LWMDDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLARKHYA
SEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSGRE
MGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRMQEEEERMRRPPTPE
PVVVQQEEAEQQSGLVTQNGLPSDQDSPRDGVDGGDLVNGVGERSSKEPSPGASPTSGRK
SKTSQSSTLPSKNQDSSSQLEGFLHRKHEWEAPNKKASNRSWHNVYCVINNQEVGFYKDS
KAAAQGIPYHNQVPVSLREATCDVASDYKKKKHVFKLRVTDGNEFLFQAKDEDEMSTWIQ
AILNTSADRSDVQGSSPGTPVSGRAQTLPAAVTLTTESSPGKREKDKEKDKEKRFSLFSK
KKQ
NT seq
7032 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggccgccgagttcgaccacatggagctgcagcagcagtacagcagc
agcaacgacacggtgaacaaccgctgggatgaagagtgggacaacgagaacagctcggcc
cgcctcttcgaacgctcacgcatcaaggcgctggcagatgagcgggaggcggtgcagaag
aagaccttcactaagtgggtgaactctcacctgtccagagtctcctgcaggatcacagac
ctctacatggacctgagggacggacgcatgctcatcaaactactggaggtcctgtcagga
gagagactgccgaagcccaccaaaggccggatgcgtattcactgtctggagaacgtggac
aaagctctgcagttcctgaaggagcagagggttcacctggagaacatgggctgtcacgac
atcgtggacggaaaccaccgactgacgctgggcctcatctggaccatcatcctccgcttc
cagattcaggacatcagtgtggagactgaagacaacaaagagaagagatcggctaaagac
gctctgctgctctggtgtcagatgaagacggcagggtatcccaacgtgaacatccgcaac
ttcagcaccagctggagagacggcatggccttcaacgctctcatccacaaacacagaccc
gatctgattgattttgacaaactgaagaagtccaacgctcaccacaacctgcagaacgct
ttcaacctggcagagcaacacctgggcatcacacagctgctggatccagaggatatcagc
gtggaccatcctgatgagaagtccgtcatcacctacgtggtgacgtattaccactacttc
tccaagatgaaggctctgaaggtggagggcaaacgcatcgggaaggtgttggataacgcc
atcgagacggagaagatgatcgagaagtacgagtctctggcctcagacctgctggagtgg
atcgaacagaccatcatcatcctcaacaataggaagttcgccaactctctggtgggagtc
cagcagcagcttcaggccttcaacacctaccgaactgtggagaaacccccaaagttcaca
gagaagggaaacctggaggtccttctgttcaccatccagagtaagatgagagccaacaat
cagaaggtctacatgccccgagagggaaaactcatctcagacatcaacaaggcctgggag
cgactggagaaggcggagcatgagagggagctggctctgaggatggagctgattcgtcag
gagaaactggaacaactggccagacgcttcgaccgcaaagcggccatgagagaaacctgg
ctcagtgagaaccagaggcttgtgtcacaggacaactttggtttcgaccttcaggccgtc
gaggcagccaccaagaagcacgaggcgatcgagacggacatcgcggcgtacgaggagcgt
gtccaggccgtggtctctgtggcgaaggagctggaggtggagcgctaccacgacatcaaa
cgcatcacggccaggaaggacaacgtgatccggctgtgggagtacctgctggagctgctg
aaggcccgcagacagagactggagatgaacctgggcctgcagagagtcttccaggagatg
ctctacatcatggactggatggatgagatgaagatgttgctgctgtctcaggattatggg
aagcatctattaggtgtggaggacctgctgcagaaacacgccctggtggaggctgacatt
gccatccaggctgaccgggtgaaggcagtcagcaccaacgcaaccaagtaccccgtcaac
gatgacggctacaagccctgtgaccctcacgtcatccaggaccgggtctcccacctggag
ttctgctaccaggagctgacccagctggccgctgagcgccgcacccgcctggaggagtcc
cgccgtctctggaagttcttctgggagatggccgaagaggaaggctggatccgtgagaag
gagcagatcctgtcctctgtcgagcacggcaaggacctgacgggggcactacgcctcctc
agccagcaacgcgctctggaggatgagatgagcggccgcgccggccacctgaagcacacc
atcgcggagggccaggccatggtgcagaccgaccacttcgccgccaccaagatccaggag
cgtattgatgacctgcaggctcagtgggcagcgctggagcagctggcagcggtgagaaga
aggaagttggaggaggcgctggcattgcaccagttccaggtcgatgcagatgatattgac
gcctggacactggatgccctgcgcatcgtctccagcggagagaccggccatgacgaattc
tccacccaggctctcttcaggaagcacaaggacgcggcggcggaggtggccagctaccga
ccggtcattgactcactccatgagcaggctgccttactgcctcaagaggaggctgagtcg
gaggaggtgcgtggacgtctggccggcatcgaggagcgccacaaggaggtgacagaactg
acaaagctgaggaagcaggcactgcaggatgctctggctctctacaagatgttcagcgag
gccaacgcctgtgaggtttggatcgacgagaaggagcagtggctgaacagcatggagatc
cccgagaaactggaggaccttgaggtcgttcagcacaggtttgagagtctggagccagag
atgaacaaccaggcgtctcgtgttgctgtggtaaaccagatcgcccggcagctgatgcac
aatggtcacccgagtgaaaaggacatcaagacccagcaggacaaactcaacaacaggtgg
agccagttccgagatctggtggaccagaagaaagagtccctcaactctgctctgggtgtg
cagaactaccacctcgactgcaacgagacaaagtcctggattaaagagaagaccaaagtc
atcgagtccacgcaggagctgggcaacgatctcactggggtcatggccctgcagcgcaaa
ctgactggtatggagcgcgacttagctgccatcgaggacaaactggtcgatctgcgaggc
gaggccgagcggctggcagaggagcaccctgaccaggcaaaggccatcacaggccgcctg
gctgagatcactgccgtctgggaggaaatgaagaacactctgaagaaccgcgaggagtca
ctgggcgaggccaggaaactgcagcagttcctgcgcgagctggacgacttccagtcctgg
ctgtctcgcactcagacagccattgcctccgaggacatgcccaacactctggctgaggcc
gagaagctcatggcccagcacgaaggcatcaagaacgagatccagaactacgaagaggac
taccagaagatgcgggacatgggggacatggtgacacagggccagacggacgcgcagtac
atgttccttcgacagagactgcaggcgctcgacaccggctggaacgaactgcacaagatg
tgggagaaccgacagaacctgctgtcccagtctcatgcctatcagctgttcctcagggac
accaagcaggccgaggccttcctcaacaaccaggagtacgtcctggcgcacaccgagatg
cccaccactctcgagggcgcagaggcagccatcaaaaagcaggaggacttcatgaccacc
atggacgccaacgaagacaagatcaacggcgtggtggaggccggcaggcggctggccagc
gacggaaacatcaacgccgaacgcatccaggagagagtcgcttccatcgacgacagacac
aagaagaaccgggaggctgcggtggagctgctgatgagactgaaggacaacagagacctg
cagaagttcctgcaggactgccaggagctgtctctgtggatcaatgagaagatgctcaca
gctcaggacatgacctacgatgaggccaggaacctgcacagcaagtggctgaagcaccag
gccttcatggctgaactgcagtccaacaaagagtggctggacaagatccagaaggaaggg
atgctgctggtgtcggagaagccagagacggaggcggtggtgaaggaaaagatggcggct
ctccacgctatgtgggaggagctagagtcgaccacgcagactaaagctcagtgtctgttc
gacgccaacaaggccgagctgttcactcagagctgtgccgacctcgacaagtggatgggt
ggcctggaggggcagatccagtccgacgactacggcaaagacctgacctccgtcaacatc
ctgctgaaaaaacaacagatgctggagaagcaggtggaggtgcggcagaaggaggtggtg
gagctgcagacccaggtgaaggctctgggtcaggaggtgaaggacactgaggaggtggac
gggcggaggcagctggtggagatgaagttccaggagctgctggagccgcttcgccgccgc
aagaacttcctggtggagtcgagagaagttcaccagttcaaccgagacgtggaggacgag
atcctctgggttcaggagaggatggccgtggccacgtcctccgaccacggacacaacctg
cagacggtccagctgctcatcaagaagaaccagactctgcagaaggagatccagggccat
cagcctcgcatcaacgacatcctggagcgcagtcagagcctcatgaaggacgagatccgg
cagcgtctggctgacctgcaggagctgtggaggcggctgatggaggaggcggagctccgc
cacggccggctggaggaggcacacaaagcccagcagtactactttgacgctgccgaggcc
gaggcctggatgagcgagcaggagctgtacatgatgtcagaggagaaggccaaggacgag
ctgagcgccgtcaccatgcagaagaagcatcagatcgtggagcaggctgtggaggactac
gccgagaccgtccaccagctgtccaagaccagcagaggactggtggcagatggacaccct
gagagtgagcgaatcagcatgcgtcagtctcaggtggataagctgtacgcaggcctgaag
gacctatcagaggagaggcggggcaaactggacgagaggctccgcctcttccagctgaac
cgggaggtggacgacctcgagcagtggatcgctgagcgggaggtggtggccggatcgcac
gagctgggacaggactacgagcatgttactatgttgcaggagcgtttccgtgagtttgct
cgggataccgggaacattggtcaggagcgcgtggacgccgtcaaccgcctggcagatgag
ctgatcaatgccggtcatggggacgcggcaacggtggcggagtggaaggacgggctgaac
gaggcctgggccgacctgctggagctcatcgacaccaggacgcagatccttgctgcctcc
tttgagctccacaagttctaccacgacgccaaggagatcctggtacgcatcctggacaaa
cagaagaagctgccggaggaggtcggccgtgaccagaacacggtggagacgctgcagagg
atgcacaccaccttcgaacatgacatccaggccctgggaacacaggtgaggcagctgcag
gaggacgcggtgcgcctacagtcggcgtacgccggagacaaagccgacgacatccagcgg
agggagagcgaagtgctggaggcctggaggagtctgctggaggcctgcgacggacgccgg
gtccgcctcctggacaccggagacaagttcaggttcttcagcatggtccgagacctgatg
ctgtggatggacgacgtgatccggctcatcgaggcccaggagaaccccagagacgtgtcg
tcagtggagctgctcatgaacaaccaccagggcatcaaggccgagatcgacgcccggaat
gacagcttcaccgcctgcattgagctcgggaaggccctgctggccaggaaacactacgct
tcagaggagatcaaagagaagctgctgcagctgacggacaaaaggaaagagatgattgac
aagtgggaggaccggtgggagtggctacgactcatcctggaggtgcaccagttctcccgg
gacgccggcgtggccgaggcctggctgctgggtcaggagccctacctgtccggcagggag
atgggtcagagcgtggacgaggtggagaagctcatcaaacgccacgaggccttcgagaag
tccgccgccacctgggaggagcggttctctgccctggagaggctgactacgctggagctg
ctggaggtgaggaggatgcaggaagaagaggagaggatgaggaggccgccgactccagag
ccggttgtggttcagcaggaggaagctgagcagcagagtggactcgtcactcagaacgga
ctcccatcagaccaggactctcctcgggacggcgtggatggtggagatctggtgaacggt
gtcggcgagcggagctccaaggagccgagccccggtgcatccccgacctccggcaggaag
agtaagacaagtcagtcatccacgctgccctccaagaaccaggactcgtcctctcagctg
gagggattcctgcaccgcaaacacgagtgggaggcccccaacaagaaggcctccaacagg
tcttggcacaatgtgtactgcgtcatcaacaaccaggaggtgggtttctacaaagacagt
aaggcggcggctcaggggatcccctaccacaaccaggtccccgtcagcctgagggaggcc
acctgtgacgtggcgtcagactacaagaagaagaaacacgtgttcaaactccgagtcacg
gatggaaacgagtttctgtttcaagccaaagatgaagacgagatgagcacctggatccag
gccatcctgaacaccagcgccgaccgctccgacgtgcagggcagcagccccggcacgccg
gtgtccgggcgcgctcagacgctgccagccgccgtcacgctcaccaccgagtcgagtccc
ggcaagagagagaaggacaaagagaaggacaaggagaaacgcttcagtctgttcagcaag
aagaaacagtag
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integrated database retrieval system
