Anoplopoma fimbria (sablefish): 129095873
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Entry
129095873 CDS
T09102
Symbol
si:zfos-323e3.4
Name
(RefSeq) LOW QUALITY PROTEIN: volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129095873 (si:zfos-323e3.4)
Ion channels [BR:
afb04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
129095873 (si:zfos-323e3.4)
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_5
LRR_EndoS
LRR_At5g56370
LRR_13
LRR_9
LRR_LRWD1
LRR_6
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
129095873
NCBI-ProteinID:
XP_054460443
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Position
9:complement(21619100..21624449)
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AA seq
809 aa
AA seq
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MIPVGEFRNFAGEQNSKYRVLKPWWDVFSEYLCVAMLMIGVFGCTLQLTQDKISCLPSHF
TSTTPEAIDCSHIRTYRDNETSENTLVPPGKPVLHEVIGRKNNLDIHQYVFVNHYCYERF
VHWFAKFFPYLVVIHTMIFMVASSFWFKFPGTSSKLDLFTTILGKCFDSPWTTRALSEVS
EERGEEKLVSWRRNTVSKDSTDRHADDEESTGLLLRSASVKSNPEKNLELQSAPSVLDKK
EGEQAKALFEKVKKFRTHVEEAKILYDMYVLQTSLKVFKFLLIIIYTAVLVPNIEIIVRC
YVPPELTGFDIYCCNHNKANLFSKLAYCYICFVGVYGLLCIYTLYWQFHRPLKEYSFEQV
RLETGINDIPDVKNDFAFLLHLVDQYDALYSKRFAVFLSEVSESHLHQLNLNYVWTTXKL
RTRLAKNSSNRLELHLSMLPGLPDTVFEIPEVESLKLEQVQNVTIPASVAKLDSLRELSL
VFCPAKLQLSALTHLKAHLKVLCLHFESLEEVPMWMYNLHSLEELHLSGPLCNEVSKSAT
LDSLRELRALRVLDLRSNLTKIPPSVVDVALQLQRLCIYNEGVKLQAFSNLKKLTNLVSL
ELVGCELERIPSAVFSLNNLQELDLKENKLTTVEEILSLQHCRRLVTLKLWHNKITYIPD
HISKLHTLETLDISWNKLRKLPSRLFYCTKLRHLDVSHNQLTSLPPEVGILQGLQFFSAA
FNSLEMLPEELFSCKRLKTLALGNNCLSDLSSRVGSLAQLVRLEVKGNRLESLPEEIGDC
PQLNLSGLIVEGNLLDLLPSDVRSKLSNR
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagtgggagaattcagaaacttcgccggagaacagaactcaaagtatcgggtc
ctgaaaccgtggtgggatgttttctcagagtacctgtgcgttgccatgctgatgattggt
gtctttgggtgcaccttgcagctcacccaagacaagatttcctgcctgcccagccacttc
accagcacgacgcctgaagcaatcgactgcagccacatccggacctacagggacaacgag
acgtcagagaacactttggtcccacctggaaagcccgtcctccatgaggtgattggtcgc
aagaacaacctggacatccaccagtacgtgtttgtcaaccactattgctacgagaggttt
gtccactggtttgcaaagttcttcccataccttgttgtgatccacactatgatcttcatg
gtagcaagcagcttctggttcaagttccccgggacctcttctaaacttgacctcttcacg
accatccttgggaagtgctttgattctccctggaccacaagggccctgagtgaggtttct
gaggaaagaggagaggagaagctggttagttggaggaggaacaccgtgtcaaaagattcc
actgatcgacacgcagatgacgaagagtccacgggactgcttcttcgctccgcctcggtc
aagtctaacccagaaaagaatctggagcttcagtctgcaccctccgtcttggataagaag
gaaggagagcaggccaaagctctgtttgaaaaggtgaagaagttcagaactcatgtggag
gaagcaaaaatcttgtatgacatgtatgtgctacaaacgtcactgaaggtcttcaagttc
cttttaatcattatctacacagcggtgctggtcccgaacattgagataatagtgcgctgt
tatgttcctcctgagctgactggttttgatatctattgctgtaaccacaacaaagccaat
cttttctccaagctcgcctactgctacatctgcttcgtgggagtgtacggacttctgtgc
atctacaccctctactggcagtttcatagacctctgaaggagtactcctttgagcaggtc
cgactggagacaggcatcaacgacataccggatgtgaagaatgactttgcgttcctcctg
caccttgtggaccaatatgatgccctgtactcaaagagatttgccgtctttctttccgaa
gtcagcgagagccatcttcatcagctcaacctcaactacgtgtggaccaccnnaaagctg
cgtacccgcctcgccaagaactccagcaaccggctggagctccacctttcaatgttgccg
gggctccctgatactgtctttgagattcctgaagtggaatcgcttaaactggagcaagtt
caaaatgtcactatcccagctagtgtggcaaagctggactctcttcgggagttatcgcta
gtcttctgccctgcaaagctccagctttctgccctgacccacctcaaggcacatttaaaa
gtcctgtgtctacattttgaaagtttagaagaggtgcctatgtggatgtacaacctgcat
agcttggaggagttacatctgagtggtcctttatgcaatgaggtgtctaaaagtgctact
ctggactctcttcgagagcttagagctctaagagtccttgatctccgctccaaccttact
aagatcccacccagcgtagtcgatgttgcgttgcagctgcagcggttgtgcatttataat
gaaggcgtcaaactccaagcttttagcaacctgaagaagttgacaaacctagtctcgctg
gagctagtgggctgcgagctggaacgcatcccaagtgctgtcttcagcctgaacaatctg
caggagctggacctgaaggagaacaaacttaccactgtggaggagatcctgagcctgcag
cactgccgtcgattggttacacttaaactgtggcacaacaaaatcacttacatccctgat
cacatcagtaagctgcacactctggagacgctggacatcagctggaacaagctacgaaag
cttccctctcggctgttttattgcaccaaactcaggcacctcgatgtctcccacaaccag
ctcacctctcttcctcctgaggtgggcatcctgcagggcctccagttcttctctgctgct
ttcaactccctagagatgctgccagaggagctgttctcttgtaagaggctaaagacgttg
gctcttggaaacaactgcctgtcggatctcagctccagagtgggcagcctggcccagctg
gtccgactggaggtcaaagggaaccgtctggagtctctacctgaggagataggggactgt
ccccagctgaatctaagcggactgatagtggagggcaacctgctggatctgcttccatca
gatgtacgaagcaagttgagtaatcgctga
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