Anoplopoma fimbria (sablefish): 129095894
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Entry
129095894 CDS
T09102
Symbol
zgc:136908
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04137
Mitophagy - animal
afb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129095894 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129095894 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129095894 (zgc:136908)
03009 Ribosome biogenesis [BR:
afb03009
]
129095894 (zgc:136908)
04131 Membrane trafficking [BR:
afb04131
]
129095894 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129095894 (zgc:136908)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129095894 (zgc:136908)
Ribosome biogenesis [BR:
afb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
129095894 (zgc:136908)
Membrane trafficking [BR:
afb04131
]
SNARE
SNARE associated proteins
Others
129095894 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129095894 (zgc:136908)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129095894 (zgc:136908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_33
AAA_2
AAA_22
CDC48_2
TIP49
Vps4_C
RNA_helicase
AAA_14
AAA_28
NPHP3_N
Parvo_NS1
ATPase_2
nSTAND3
Mg_chelatase
AAA_7
AAA_18
IstB_IS21
AAA_17
ABC_tran
DUF815
ATPase
AAA_24
TsaE
NACHT
ResIII
Sigma54_activat
Viral_helicase1
NB-ARC
PhoH
SLFN-g3_helicase
Cytidylate_kin
KAP_NTPase
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
129095894
NCBI-ProteinID:
XP_054460475
LinkDB
All DBs
Position
9:complement(26374832..26381713)
Genome browser
AA seq
808 aa
AA seq
DB search
MPGSGGADLKGEDFSTAILKQKHRPNRLIVDEALNEDSSIVSLSQNKTEELQLFRGDTVV
LRGRKRRETVCIVLNDDTCGQERIHINRVTRSNLRVRLGDVISIHACPDIKYGKKIHVLP
IDDTIEGLTGNLFDVFLKPYFLEAYRPIHTGDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVIYCEGDPIKREDEEESLNDVGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDPALR
RFGRFDREIDIGIPDSIGRLEIMQIHTKNMKLADDIDLERIAKETHGHVGADLAALCSEA
ALQTIRKKMTLIDLEDDSIDADVLNSMAVTMDDFEWALSQSNPSALRETFAEVPQVNWED
VGGLDEVKRELQELVQYPVEYPEKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDGSGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDAAILRPGRLDQLIYIPLPDKSSRMAILN
ANLRKSPIARDVNLDYLSGITEGFSGADLTEICQRACKLAIREAIEAEIKAERQRQNRPD
IPMDEDFDPVPEIRKDHFEEAMRYARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSDTG
TQSEGQGSGSGSGRPNLHREEGNDDLYQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctcaggaggagcagacttaaagggagaagatttctccactgccatcctaaag
cagaaacacagacctaacagactcattgtggacgaagctctcaatgaagacagcagcatt
gtcagcctgtcacagaacaaaacggaggagctgcagctcttccggggggacacggtggtg
ttgagagggaggaagcgtcgcgagacggtgtgcattgtcctgaatgatgacacctgtggg
caagaaagaatacacattaatcgtgtgacgcgcagcaacctgcgtgtccggctcggtgat
gtcatcagtattcatgcctgccctgacatcaagtacgggaaaaagatccatgtcctccct
atagatgacaccatcgagggcctgacaggaaacctctttgacgttttcctaaaaccatat
tttctggaggcttaccggcccatacatacaggtgacatcttcttggtgagggggagcatg
cgggcggtggagttcaaggtggtggagactgaccccagccctcactgcattgttgcccca
gacactgtcatctactgcgagggggatccaatcaagagagaggacgaggaggagagcctt
aatgacgtcggctacgacgacatcggaggctgtcggaagcagcttgcccaaatcaaagag
atggtggagcttcctctgagacaccctggcctttttaaggctataggagttaagcccccc
agaggtatcctgctgtacggccctgcaggcacaggaaagaccctggtggcccgagctgta
gccaatgaaactggtgccttcttcttcctcatcaatggtcctgagatcatgagtaagctg
gcgggagagtcagagagcaacctaagaaaggcgtttgaggaggcggagaaaaacgctcca
gccatcatctttattgatgagctggatgccatcgctcccaagagagagaagacccatggt
gaagtggagagacgtatagtctctcagctcctgaccctgatggatggcctgaagcaaaga
gctcatgtagttgtcatggcagctacaaaccgaccaaacagcgtggaccctgctctgaga
cgctttggcaggtttgaccgggagattgatattggaatcccggattcgattggcagactg
gagattatgcagattcacaccaaaaacatgaaattggctgacgacatcgacctggagagg
attgccaaagagacccacggccatgtaggcgcagacctggctgctttgtgctcagaagct
gccctgcaaacaatccgcaagaagatgacactcatagacctggaggacgattccatcgac
gccgacgtgctcaactcaatggctgtcaccatggatgacttcgagtgggctctgagtcag
agcaacccttcagctctgagagaaaccttcgcggaggtgcctcaggtgaactgggaggac
gtcggaggactggacgaggtcaagagagaactgcaagagctcgttcagtaccctgttgag
tatccggaaaagttcctgaagtttggtatgactccatctcgtggagtattgttctacggc
cctcccggctgtgggaaaaccctgctggccaaggctatcgccaacgagtgccaagcaaac
tttgtctccatcaaaggacccgagatgctcaccatgtggtttggagaatcggaggcaaat
gtcagagacgtgtttgataaggccagacaggcagccccctgcatcttgtttttcgacgag
ttggactccatcgccaaatccagaggaggcggagctggggatggaagtggtgcggctgac
agagtcatcaaccagatactcacagagatggacggcatgtcggacaaaaaaaatgttttc
attattggtgccacaaacagacccgacatcatcgacgctgccatcctgcggccgggccgt
ttagaccagctcatctacatcccactccctgacaaatcatctcgcatggcaatcctgaac
gctaacctgcgcaagtcccctatcgcacgggatgtgaacctggattacctgtctggcatc
acagagggtttctccggagctgacctgacagagatctgccagcgggcctgtaagctggcc
atccgtgaggccatcgaggccgagatcaaggctgagcgtcagaggcagaacagaccagac
atccccatggatgaggactttgatccagtcccagagatcaggaaggaccactttgaagag
gcgatgcgatatgctcgtcgctctgtcagcgacaatgacatccgcaaatatgaaatgttt
gctcaaactctgcagcagagccgaggttttggaaacttcaggttcccctctgatactggc
acccagtctgaaggtcaggggtcaggctctggttcagggaggccaaatctgcacagagag
gaaggcaatgacgatctctatcaatga
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integrated database retrieval system
