KEGG   Anoplopoma fimbria (sablefish): 129095978
Entry
129095978         CDS       T09102                                 
Symbol
xpo1a
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03008  Ribosome biogenesis in eukaryotes
afb03013  Nucleocytoplasmic transport
afb03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129095978 (xpo1a)
   03008 Ribosome biogenesis in eukaryotes
    129095978 (xpo1a)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129095978 (xpo1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129095978 (xpo1a)
   03009 Ribosome biogenesis [BR:afb03009]
    129095978 (xpo1a)
   03016 Transfer RNA biogenesis [BR:afb03016]
    129095978 (xpo1a)
   03036 Chromosome and associated proteins [BR:afb03036]
    129095978 (xpo1a)
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     129095978 (xpo1a)
Ribosome biogenesis [BR:afb03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    129095978 (xpo1a)
  Pre-60S particles
    129095978 (xpo1a)
Transfer RNA biogenesis [BR:afb03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    129095978 (xpo1a)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     129095978 (xpo1a)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd BspA_v Gluconate_2-dh3 OS-C_C
Other DBs
NCBI-GeneID: 129095978
NCBI-ProteinID: XP_054460580
LinkDB
Position
9
AA seq 1066 aa
MPAEMTMLADHPARQLLDFSQKLDINLLDNVVNSMYHDIGSQQRVAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPANM
EKEGVYISKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMCQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHFMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSSTPLLSDVPPRRHLYLPVLSQVRLLMVSRMA
KPEEVLVVENDQGEVVREFMKDTDAINLYKNMRETLVYLTHLDYADTERIMTEKLHNQVN
GTEWSWRNLNMLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIM
YIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVG
EVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQALQERLIEKYMLLPNQVW
DSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNVYKCLS
ENISSAVQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPLLEAVL
IDYQRNVPAAREPEVLSTMATIVNKLGVHITGEIPKIFDAVFECTLNMINKDFEEFPEHR
THFFYLLQAATSQCFPAFLSIAPAQFKLILDSIIWAFKHTMRNVADTGLQILYTLLQNVS
GEDAAAQSFYQTYFCDVLQHIFSVVTDTSHTAGLTMHATILAYMFNLVEEGKVSVALSAA
SPANNQAHVQEYIANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEF
AGEDTTDLFLEERETALRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgccagcagaaatgacgatgttggccgaccacccagccaggcagctgctggacttcagt
cagaaactggacatcaacctgctggacaatgtcgtcaactccatgtaccacgacattgga
tcccagcaacgagtggcccaggaagttctcaccaacctgaaggaccacccagacgcctgg
acgagggtcgacaccatcctggagttctctcagaacatgaaaactaaatattatgcactg
cagattctagagacagtcatcaaaacccgatggaagattctccccagaaatcagtgtgaa
ggcatcaagaagtatgttgttgggttgatcatcaagacgtcttctgatcctgcaaacatg
gagaaagagggagtttacatttcaaaactcaacatgatcctcgtacagatcctgaagcag
gagtggcccaaacactggcccaccttcatcagcgatatcgtgggcgcgagtcggaccagc
gagagcctctgtcagaacaacatgatcatcctcaagctgctcagcgaggaggtctttgac
ttctccagtggccagatgacccaggtgaaggccaagcacctcaaagacagcatgtgcaac
gagttctcccaaatattccagctgtgccagtttgtgatggaaaactcccagaatgcccca
ctggtccacgccacgctggagaccctcctccgcttcctgaattggatccctttaggttac
atctttgagaccaagctcatcagcacgctggtctacaagttcttgaacgtccccatgttt
cgcaacgtgacgctgaaatgtttgacggagatcgccggagtgagcgtcaaccagtacgag
gagcagtttgtcaacctgtttaccctcaccatgtgccagctcaaacagatgctacctttg
aacacaaacatcagattggcgtactccaacgggaaagacgacgagcagaacttcatccag
aacctcagcctgttcctctgcacgttcctcaaagaacacggccagctcatcgagaagagg
ccgaacctgagggagacgctcatggaggccctgcacttcatgctgctggtgtcagaagtg
gaggagacggagatctttaagatctgtctggagtactggaaccacctggcggcggagctc
tacagggagagtcctttctccacctccagcaccccgctgctctccgacgtcccgccacgc
agacacctctacctgcctgttctctcccaggtgcgtctgctgatggtgagccgcatggca
aaaccagaggaggtgctggtggtggagaatgaccagggcgaggtggtcagggagttcatg
aaggacacagacgcaatcaacctttacaagaacatgagggagactctcgtgtacctgacc
catctggactacgccgacactgaacgcatcatgacagagaagctccacaaccaggtaaac
ggcaccgagtggtcgtggaggaacctgaacatgctctgctgggccatcggctccatcagc
ggggcgatgcacgaggaggacgagaagaggttcctggtcacagtcatcaaggacctgctt
ggcttgtgtgagcagaaaagagggaaggacaacaaggccatcatagcgtcaaacatcatg
tacattgtgggccagtatcctcgcttccttagagcccactggaagttcctcaagactgtc
gtcaacaaactgtttgagttcatgcacgagacccacgacggagtgcaggacatggcgtgt
gacaccttcatcaagatcgcccagaagtgccggcgtcattttgtccaggtccaggtgggc
gaggtgatgcccttcatcgacgagatcctcaacaacatcaacaccatcatctgtgacctg
cagccacagcaggtgcacacgttttatgaggccgttggctacatgattggagctcagaca
gaccaggcacttcaggagcgtctgatagagaagtacatgctgcttcctaaccaggtgtgg
gacagcatcatccagcaggccaccaagaacgtggacatcctgaaggacgcggagacggtg
cgtcagctgggcagcatcttaaaaacaaatgtccgagcctgtaaagctgtgggacatccc
tttgtggtccagctgggacgaatctacctggacatgctcaacgtctacaagtgtctgagt
gaaaacatttcctctgcggtccagaccaacggtgagatggtgaccaaacagcctctgatc
aggagtatgaggacggtaaagagagagacactgaagctgatctcaggctgggtcagtcgc
tccaacgaccctcagatggtaggagagaacttcgtgccccccctgctggaggcggtgctc
atcgactaccagaggaacgtcccggctgcccgggagcccgaggtcctcagcaccatggca
accatcgtcaacaagctgggagttcacatcacgggagaaatccccaagatctttgatgcc
gtcttcgagtgtactttgaacatgatcaacaaggactttgaagaattcccagaacacaga
acacatttcttctacctccttcaagccgccacctcccagtgcttcccagccttcctgtcc
atcgccccggcccagttcaaactgatcctcgactccatcatctgggccttcaagcacacc
atgaggaacgtggccgacacaggtctccagatcctctacacgctcctgcagaacgtgtct
ggagaggatgcagcagcacagagcttctaccagacgtacttctgtgacgtcctgcagcac
atcttctctgtggtcaccgatacctctcacactgcagggctgaccatgcacgccaccatc
ttggcctacatgtttaacctggtggaggaagggaaggtcagcgttgcactgagcgccgcc
agtccggcaaacaaccaggcgcacgtccaggagtacatcgccaacctgctgaagacggcc
ttcccacatctgcaagacgcccaggtgaaggtgtttgtgacggggctgttcagcctgaat
caggacatccccgccttcaaggagcacctgagggacttccttgtgcagatcaaggagttt
gccggcgaggacacgacggacctgttcctggaggagagggagacggctctgcgccaagcc
caggaggagaaacacaagctccagatgtcggtgcccggaatcctcaaccctcacgagctg
ccggaggagatgtgcgactga

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