Anoplopoma fimbria (sablefish): 129095991
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Entry
129095991 CDS
T09102
Symbol
usp43a
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129095991 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129095991 (usp43a)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129095991 (usp43a)
Peptidases and inhibitors [BR:
afb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129095991 (usp43a)
Ubiquitin system [BR:
afb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129095991 (usp43a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
129095991
NCBI-ProteinID:
XP_054460595
LinkDB
All DBs
Position
9:complement(22637403..22749816)
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AA seq
1241 aa
AA seq
DB search
METRKEKKVRRAMKPKASQRKEKKHRAGRFVRRKSLRSFGNFMGRILKTLGTFAHFGDAE
PPDAEDDDGGFGQSASSSAGGFKDDAVPMNREGGVKKTSTSSSLHGPGKGRLSWCHGDKT
PGVLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEQYKSQLCPGRANGEPRGEEPQAXRG
EVTEQLASLVRGLWTLEYTPHLSVEFKSIVAKYGSQFRGNSQHDALEFLLWLLDRVHEDA
NHSPNNNNNTNSSSSSSSKTKASAKGPSSLEDPSSPSSASTQQPRDRHSFVQEHFQAQYR
SSLTCPHCLKQSNTFDPFSCISLPIPLRQTRPMCVTLVFSTKGQRYLRVGLAVPLIGSLS
CLRAMVAEEGNISPDQVILSELYSTGFQRSFSDDDDLTAIADSDVIYAFQAPPLYSRGGS
TAHSGYHHSLPSSPYTSSSAGPDGQRLPASGTLSSEYLNQGGSTKVLLIICNTAGSGPQA
VRFGPPFLMREDRSVSWDQLQQSILSKLYYLMLNGSQAQNAGVLFKIRVVGGSAAYSYLS
PQDSKPLHHPAVDRALKFCGTGGPPHVKIVIEWENKTKECLFGSIQEEVVKDAESVRSQQ
QQHLQQHSCTLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKR
FRQVGDRRNKLSTLVRFPLTGLDMAPHVVKRSQSTRNLNLGAWPPPWKQPSGQHHQPADM
ILPHDYLYDLYAVCNHHGGMHGGHYTAYCRNSVDGQWYSYDDSSVDLVPEEEVSTRGAYI
LFYQRRNIIPPWSASCSVRGSTSSSMSDHWLIRLTGDSKRGSMVSRSSTTCPSSLPDSPE
SPVFLENGSKEERGEGGFESRPFIRGLQGRSVSMKAPSKTKEALSKVFPLRWSFGSKDRR
KPDPVPPSVQDPAPVELVQYLESGRRPRCTKDPIATLMREPRRTKEPAEGRAPTNVRSAS
VGSLSCINKSDDELQPESLQVPEGQRREPDKTASLRRRKGSQTRDEISSSSGSNTLNSRK
DARRQSSSKASQDTTETKRSSSAGVQPSYSTPSLQDGTLRRQKGDRAEREHNGAYEGNSK
TKKGEVPKNHEGLLSFFKGNFLKKDRDSRRSKEGESGRGGGEEGGRRALSRLSLSNGAAG
GGTGVEGAKPKGPGHPGDELANGKTGRTTADIKRSQSSSNIPTKAEPSIRRTASLHRNGM
STAPAPPRSLTTDKPSYGTLQRTRYSTTSLGRKRTVPESSF
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggagacccgcaaggagaagaaggtaaggagagccatgaagcccaaagcctcccagagg
aaggagaagaagcacagagccgggaggttcgtccggaggaaatctctgcgctcttttggg
aatttcatgggaaggattcttaaaactttgggcacttttgcgcactttggcgacgcggag
ccgccagacgcggaggacgacgacggcggcttcgggcagagcgcgtcgtcgtctgcgggc
ggcttcaaagacgacgcggtgccgatgaaccgggagggaggcgtgaagaagacctccacg
tcctcctcgctgcacggcccggggaaaggcaggctgtcgtggtgccacggagacaagacc
cccggggtgctggggctgaagaaccacgggaacacctgcttcatgaacgccgtggtgcag
tgcctcagcaacaccgacctgctggccgagtacctcgggctggagcagtacaagtcccag
ctctgccccgggagagcgaacggggagccgcggggcgaggagccgcaggccncccgggga
gaggtgaccgagcagctggcctcgctggttcggggtctgtggacgctggagtacaccccg
catctgtccgtggagttcaagagcatagtggccaagtacggctctcagtttcggggaaac
tctcagcacgacgccctggagttcctcctctggcttttggacagagttcatgaagatgct
aatcacagccccaacaacaacaacaacaccaacagcagcagcagcagcagcagcaagacc
aaagcctccgccaagggacccagttcgttggaggatccttccagccccagttcagccagc
acgcagcagcctcgagatcgacacagttttgtccaggaacacttccaggctcagtacagg
tcttctctgacgtgccctcattgccttaagcagagcaacaccttcgacccattttcatgt
atctccctgcccatccccctacgacaaaccaggccgatgtgtgtgacactcgtgttcagt
acgaagggtcagaggtacctgcgggtggggctggctgtacccctcattggttccctgtcc
tgcctgagggccatggtggcagaggagggcaacatctccccggaccaggtcatcctctca
gagttgtactccacgggtttccagcgttccttttcagacgatgatgatctgacagcgatc
gctgatagtgacgtcatctacgcctttcaggctccacccctctatagtcgtggaggctcc
acagcgcactcagggtatcaccacagcctcccctcctccccctacacctcctcctcggct
ggacccgacggtcagaggttacctgcatctggcacgctctcctctgaatacctgaaccag
ggcggctccaccaaggtcctcctcatcatctgcaacacagcaggatctggcccgcaggcc
gtcaggtttggacctccattcctcatgcgcgaggacaggagcgtctcctgggaccagctg
cagcagagcatcctcagcaagctctattatctgatgctgaatggatcccaggctcagaat
gccggagtgctctttaaaatcagagtagtgggaggatcggccgcctacagctacctgtcc
ccacaggacagcaagccactgcaccacccggcagttgacagagctctgaagttctgcggc
accgggggacctcctcacgtaaagatcgtcattgagtgggagaacaagactaaagaatgt
ctttttggcagcatccaggaggaggtggtcaaggacgcggagagtgtgaggagccagcag
cagcagcacctgcagcagcacagctgtacgttggacgagtgcttccagctgtataccaaa
gaagaacagctcgccccggatgacgcctggaagtgtccgcactgcaagcagcttcagcag
ggcatggtgaagatgagcctgtggactctccccgacatactcatcctccacctcaagcgc
ttcagacaggttggcgaccgaaggaacaagctgtcgaccctggtgcgcttccccctgact
ggtttggacatggccccccatgtggtcaagaggagtcagagcacgaggaacctgaactta
ggggcctggccaccgccctggaagcagccgtcaggccaacatcaccaacctgccgacatg
atcctcccccacgactatctgtacgacctctacgctgtgtgtaaccaccacggaggaatg
cacggaggacattatactgcttactgtaggaactcagtggacggacagtggtacagctac
gacgacagcagcgtggacttggtgccggaggaggaggtgtctaccagaggagcctacatc
cttttctaccagaggcgcaacatcattccaccatggtcggccagttgctccgtcagaggg
tccaccagttcatcaatgtcagaccactggctaatccggctgacaggggatagcaagaga
ggcagtatggtctcccggtcctccaccacctgcccgtcttccttacctgactcacctgag
tctccggtcttccttgaaaatggttctaaagaggaacgaggtgaggggggttttgagagc
aggccctttatcaggggtcttcaggggcgcagcgtgagcatgaaagcccccagcaagacc
aaggaggccctgagcaaagtgtttcccctgcgctggtcatttggatcaaaggacagacgg
aaaccagacccggtgcctccgtctgtccaagatcctgcccctgtggagctggtacagtac
ttggaatctggccggcggccccggtgcacaaaggatccaatagcaacattgatgagggaa
ccgcgcaggacaaaggaaccagccgagggccgagctccgaccaatgtcagatctgccagt
gttgggagcttgagttgtataaataagtcagatgatgagctgcaaccggagtcgctgcag
gtcccggagggccagaggagggaaccggataagacagccagcttgagacgcaggaagggg
agccagaccagagatgagatcagcagtagctctggtagtaacaccctgaacagcaggaag
gatgccaggagacaaagctcctcaaaagcctcccaggacactactgagacaaaaaggagt
tccagtgctggagtgcagcccagctacagcactcctagccttcaggatgggaccctgaga
agacagaaaggggacagggctgaaagggaacacaacggtgcatacgaaggaaactctaag
accaagaaaggagaagtgcccaagaaccacgagggactgctctccttctttaaaggtaac
ttcctgaagaaggatagggactcaaggaggtccaaggagggggagtcagggagaggagga
ggtgaggaaggaggcagaagggccctctccaggctgtcgctgtccaacggagcagcgggt
ggaggaactggggtggaaggagccaagcctaaaggtccgggccatccgggcgatgagctg
gcgaacgggaagacgggacgaaccacggcggacatcaagcgctcccagagctcctccaac
atccccaccaaagcggagccgagcattcgcaggacggcgtctctgcatcgcaacgggatg
tccacagccccggcaccgccacgcagcctgacaacggacaaaccgtcttacggcaccctg
cagaggacccggtacagcaccacctcgctgggacgcaaaaggacagtccccgagtccagc
ttctga
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