Anoplopoma fimbria (sablefish): 129095994
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Entry
129095994 CDS
T09102
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04144
Endocytosis
afb04517
IgSF CAM signaling
afb04530
Tight junction
afb04810
Regulation of actin cytoskeleton
afb05100
Bacterial invasion of epithelial cells
afb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129095994 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129095994 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
129095994 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
129095994 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129095994 (arpc1b)
05100 Bacterial invasion of epithelial cells
129095994 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129095994 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129095994 (arpc1b)
Membrane trafficking [BR:
afb04131
]
Others
Actin-binding proteins
Arp2/3 complex
129095994 (arpc1b)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
129095994 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
129095994
NCBI-ProteinID:
XP_054460600
LinkDB
All DBs
Position
9:7147052..7153602
Genome browser
AA seq
380 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIAMCPNNHEVHIYKKDGIKWNKIHELKEHNGQVTGIDW
ATESNRIVTCGADRNAYVWTLKEGVWKPTLVILRINRAARCVTWSPQENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGCCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGEMLFESGGSVAVGQTSAGGGGWVHSVCFSHSGNRLAWTSHDSTVSVAE
GGKTGTVNSLSSETLPLLCVTFITENSLVAAGHDCYPVLFVYDGAKTSLTFGGKLDVPKQ
AAQKGISARERFQNLDRRASETQSTEKDLNTLHKNSISQISVLEGGRNKCTKFCTTGMDG
GLAIWDVKSLESAMKDLKIV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccatagtttcctgctggaaccaattagctgccatgcctggaacaaagatcgt
acccagatcgccatgtgccccaacaaccatgaggtccacatctacaagaaggatgggatc
aagtggaacaagatccatgagctgaaggagcacaatgggcaggtgacaggtatcgactgg
gctacagaaagtaaccgtatagtcacttgcggagcggaccgtaacgcctacgtgtggacc
ctaaaggagggcgtgtggaagcccaccctggtcatcctcaggatcaaccgtgctgctcgc
tgcgtcacatggtcgccacaagagaacaagtttgcagtaggcagcggctcacgcctcatc
tccatctgctactttgagcaggaaaacgactggtgggtgtgcaagcatatcaagaagccg
atccgctccaccatcctcagtctggactggcatcccaacaacgtcctgctggctgctgga
tgctgtgacttcaaatgcagggtgttttccgcctacattaaggaggtggaggagaagccc
ggccccaccccttggggcagcaagatgccgttcggggagatgttgtttgagtccggcggt
tccgtagcggtaggtcagacctcagctggaggcggaggttgggtgcacagcgtctgcttc
tcacactccggcaaccgcctggcctggacctcccacgactccacggtgtctgtggcagag
ggaggcaagaccggcacggtgaacagtctgagctctgagactcttcctctgctgtgtgtc
accttcatcactgagaacagcttagtagcagctggccacgactgttacccggtgctgttt
gtgtacgacggtgccaaaaccagcctgacatttggtggcaagctggacgttcctaagcag
gcggcccagaagggcatcagtgccagggaacgtttccagaacctggaccgtcgggcctca
gagacccagagcaccgagaaggacctgaacaccctgcacaagaacagcatcagccaaatc
tcagtgctggaaggaggacgaaacaagtgcaccaagttctgcaccaccggcatggatgga
ggattggccatctgggatgtcaagagtctggagtctgcaatgaaggatttaaagattgtc
tga
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