Anoplopoma fimbria (sablefish): 129096030
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Entry
129096030 CDS
T09102
Name
(RefSeq) B-cell receptor CD22-like isoform X1
KO
K06467
CD22 antigen
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129096030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129096030
04090 CD molecules [BR:
afb04090
]
129096030
04091 Lectins [BR:
afb04091
]
129096030
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
SIGLEC family
129096030
CD molecules [BR:
afb04090
]
Proteins
129096030
Lectins [BR:
afb04091
]
I-type lectins (Siglecs)
129096030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
V-set
ig
Ig_CD22
Ig_5
Ig_VEGFR-1-like_5th
Ig_4
CUB_M02D8_5_5th
C2-set_2
PKD
Motif
Other DBs
NCBI-GeneID:
129096030
NCBI-ProteinID:
XP_054460651
LinkDB
All DBs
Position
9:complement(2819274..2827312)
Genome browser
AA seq
570 aa
AA seq
DB search
MSLTAAVSGFVVFLLSAPVIHGQDGWRVTYTPTKICAVGGSTVEIRCSYTYPYTISRLKT
RVEETFWFTKVSNDVFVDLRTDPEYSGRVQSHCGNNYCTLTITNVRESDSAEYKFMFTTN
QPGGKYTGDTGVSLSVTDLQVQVNKLAVFQSHNRAELTCQSSCLLPGRPPYVWYNNGQKI
QRQTSILYLDNFNPADSISCAVGGYEDFPSPSLLIHGQDGWRVTYTSSKVCALKGSTVEI
HCSYTYPYQISGVKTQVEETFWFTKVSNDVFVDLRTDPEYSGRVQYDCRNNYCTLTITNV
RESDSAEYKFMFSTNQPKGKYVGEPGVSLSVTDLQVQVNRLAVYQSYHRAELTCQSSCLP
PGRPLYVWNKNGQKIQRQTSVSYSDNFNPSDSISCAEGGYEDFPSPSVYAPKLPSVSVSP
SDEIVEGSSVTLTCSSDANPAANYTWYKEDEDSPKASGQIFTITDIRTEHSGNYSCEAQN
NRGRHNSTFLLMIVAGNSTMIMNIIRSTLVVLMLIPLLLLSLWTRKKKPLSSTTEPHELI
EVELDSCPVYEIFSEAAAQTEDTEEQEDRV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaactgcagcagtgagtggatttgtcgtcttccttctctctgcaccagtgatt
catggtcaggatggctggagagtgacttacactcctactaagatctgtgctgtaggagga
tcaacagtggaaatacgctgcagctacacatacccatacacaatatctcgccttaaaacc
cgagttgaggaaacattttggttcactaaagtgagtaatgatgtttttgtggatctgaga
acggacccggagtattcaggtcgtgtgcagtctcactgtggaaacaactactgcactctg
acaatcacaaacgtgagagagagcgactcagctgagtacaagttcatgttcactacaaac
caaccaggtgggaagtatactggtgatactggagtctctctgtccgtcacagatctccag
gttcaggtgaacaaattagctgtcttccagtctcataaccgggcagagttgacgtgtcag
agcagctgtcttcttcctggtcgtcctccctacgtctggtacaacaatggacagaagatt
cagagacaaacttctattttgtatttagacaactttaatcctgcagacagcatctcctgt
gctgtaggaggatatgaggacttcccctctccttcactgttgattcatggtcaggatggc
tggagagtgacctacacctcttctaaggtctgtgccttaaaaggatcaacagtggaaata
cactgcagctacacatacccataccaaatatctggcgttaaaacccaagttgaggaaaca
ttttggttcactaaagtgagtaatgatgtttttgtggatctgagaacggacccggagtat
tcaggtcgtgtgcagtatgactgtagaaacaactactgcactctgacaatcacaaacgtg
agagagagcgactcagctgagtacaagttcatgttttctacaaaccaaccaaaaggtaaa
tacgttggtgaacctggagtctctctgtccgtcacagatctccaggttcaggtgaacaga
ttagctgtctaccagtcttatcaccgggcagagttgacgtgtcagagcagctgtcttcct
cctggtcgtcctctctacgtctggaacaagaatggacagaagattcagagacaaacttct
gtttcgtactcagacaactttaatccttcagacagcatctcctgtgctgaaggaggatat
gaggacttcccctctccttcagtgtatgctccaaagcttccctctgtgtcagtgagtccc
tctgatgagatagtggagggcagttcagtgactctgacctgtagcagtgatgctaaccca
gcagctaactacacctggtacaaggaggatgaagactcaccaaaagcatcaggacagatc
ttcaccatcactgacatcagaactgaacacagtgggaattattcctgtgaagcccagaac
aacagaggacgtcataactccacctttcttctgatgattgtagctgggaattcaacaatg
ataatgaatatcatcaggtccactctggtggtcttgatgctgattcctctgcttctcctg
agtctgtggacgaggaagaagaaacctctgagctccaccactgaaccacacgaactcata
gaggtagagttggactcttgtcctgtctatgagatcttctcagaagctgcagcacagaca
gaagacacagaggagcaggaagaccgggtgtga
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