KEGG   Anoplopoma fimbria (sablefish): 129096060
Entry
129096060         CDS       T09102                                 
Name
(RefSeq) elongation factor 1-alpha 1
  KO
K03231  elongation factor 1-alpha
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129096060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129096060
   03016 Transfer RNA biogenesis [BR:afb03016]
    129096060
   03012 Translation factors [BR:afb03012]
    129096060
   04131 Membrane trafficking [BR:afb04131]
    129096060
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129096060
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     129096060
Transfer RNA biogenesis [BR:afb03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    129096060
Translation factors [BR:afb03012]
 Eukaryotic type
  Elongation factors
   129096060
Membrane trafficking [BR:afb04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    129096060
Exosome [BR:afb04147]
 Exosomal proteins
  Proteins found in most exosomes
   129096060
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 Gtr1_RagA
Other DBs
NCBI-GeneID: 129096060
NCBI-ProteinID: XP_054460687
LinkDB
Position
9
AA seq 462 aa
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSPNMTWFKGWKINRKDGNASGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLRPAMVVTFAPVNVTTEVKSVEMHHEALD
QALPGDNVGFNVKNVSVKDIRRGNVAGDSRNDPPQEAAGFTAQVIILNHPGQINAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAIGSGKITKSAQKAQKVK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggggaaagagaagctccacataaacattgtggtgatcggacatgtcgactcaggcaag
tccaccaccaccggccacctcatctacaagtgtgggggcattgataagagaacaattgag
aagtttgagaaggaagctgctgagatgggaaagggttccttcaaatacgcctgggttctg
gacaagctgaaggctgagcgtgagcgcggcatcaccattgacatctctctttggaagttt
gaaaccagcaagtactacgtcaccatcattgatgctccaggacacagggacttcatcaag
aacatgatcactgggacttctcaggctgactgtgctgtgctggtcgtggctgcaggcgtt
ggtgagtttgaagccggcatctcaaagaacgggcagactcgtgaacacgccctcctcgcc
tacaccctgggagtaaagcagctcattgtgggcatcaacaagatggattccactgagccc
aactacagccagaagcgctacgaggagatcgtgaaggaagtcagtacttacatcaagaag
atcggctacaaccccgacaccgtggcctttgtgcccatctccggctggaacggagacaac
atgctggaacccagccccaatatgacctggttcaagggctggaagatcaaccgtaaagac
ggcaatgcctcaggcaccaccctgctggaggctctggacgccatccagcctcccacgcgc
cccactgacaagcccctccgcctgcctctgcaggacgtctacaagattggaggcattggg
accgtaccagtgggccgagtagagacaggagtcctaagacctgccatggtggtgaccttt
gcccctgtcaatgttaccactgaggtcaagtcagtggaaatgcaccacgaggccctggac
caggcgcttcctggtgacaatgtgggctttaacgtcaagaatgtgtccgtcaaggatatt
cgccgtggcaacgtggctggagacagcaggaacgacccaccacaggaggcggccggcttc
accgctcaggtgattatcctgaaccaccctggtcagatcaatgctggctacgctcccgtg
ctggactgccacactgcacacatcgcatgcaaatttgcagagctcaaggaaaagatcgac
cgtcggtctggtaagaagctggaagacaaccccaaggccctgaagtctggagatgctgcc
attgtggacatgatccccggcaagcccatgtgtgtggagagcttctctgagtacccgcca
ctggggaggtttgcggtccgtgacatgcgtcagactgtggcagtgggagtgattaaaggc
gtggaaaagaaagcaatcggcagcggtaagatcaccaagtccgcacagaaggcgcagaag
gtcaaatga

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