Anoplopoma fimbria (sablefish): 129096232
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Entry
129096232 CDS
T09102
Name
(RefSeq) perforin-1-like
KO
K07818
perforin 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129096232
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Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
129096232
NCBI-ProteinID:
XP_054460926
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Position
9:complement(15256810..15259271)
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AA seq
583 aa
AA seq
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MARLWHLMLLCWAWSPLCLSADVGFLGSPQECEKAHFVPGYNLGGEGFNIVTMERKGAYV
IDTETWNLGNNTCRMFSNGYMNRERQKVPAAMVDWRTLPKCSLKVSSVVYDSVETLVNDS
TSSVSNDWKIGLEFPVDPSVTLGVGFGGSHSKESSYAMQKSKQDHFTFFRHSVDCSFYRY
RLATNPPRSRSFESAVSSLPSYSYQTSSLYRSLIDAYGTHYITQVSLGGQIKAITSVKTC
QATMSGLSATEVNDCLSVEASATFASTASIRAMYKRCQGLKKKLGSSQSFSSAFNDRSTE
VIGGDIDNNVLFESQLNPSAYNNWLKSLKTTPDVVQYSLSPLHTILPSSHSARAGLKQEV
EKYIKDNAVLKRCSETCKIGHRSNKRDPCACVCNSSRNVKSNCCPAGKGLATLKVFKLYA
QGLYGDKWTQTDGSVKVKYGDQLKRTQIISNNDNPRWSESFMFGPIVISMQNKLTFSVYD
EDSYWDSDLLGQCFIDLRQGTVSDSCMLNHGTLFFSYIVECAPSLSGDQCQEYIPSPMST
SLAKVFYTRNGVLLGTEESNAIPDVQSGLRSAVDDESDDRATV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggctgtggcatctcatgctcctttgctgggcctggagccctctgtgtctgtcc
gccgatgtgggcttcttgggttcaccacaggagtgcgaaaaggctcactttgtccctggt
tacaacctgggtggagaaggcttcaacatcgtcacaatggagcggaaaggtgcctatgtc
atcgacacggaaacatggaacctcggcaacaacacttgcaggatgttcagcaacggctac
atgaaccgggagagacagaaggtcccagctgccatggtggactggagaaccctcccaaag
tgcagtttaaaggtctccagtgtagtctacgattctgttgaaactcttgtcaatgactcc
acctcgtctgtgtccaatgattggaaaattggccttgaattccctgtagacccgtctgtt
actcttggtgttggctttggaggttcccattcgaaagaatctagctatgccatgcaaaag
tcaaaacaagaccacttcaccttctttcgccattctgtcgactgtagcttctatcgctac
agattggcaacaaatccaccacggagtcgtagctttgaatcagccgtgagctcccttcca
tcctattcatatcaaacatcgtcactatatcgcagtctgattgacgcatatggtacacat
tacataacacaagtgtctctaggtgggcaaataaaagcaatcacttctgtcaagacctgc
caagcaaccatgagtgggctgtcggcaacagaagtcaatgactgtttgtcagtcgaggcc
tctgctacgtttgctagcactgccagcattagggcgatgtacaaacgctgtcagggactg
aagaagaagttaggctccagccaaagtttcagcagcgcttttaatgaccgcagcacagaa
gtcattggtggagacattgacaacaacgtcctctttgaaagccaattgaacccctctgcc
tataacaactggcttaagtcactgaagaccacacctgatgtggtccaatacagcctgagc
cccctgcacaccatactgccaagcagccattctgccagggctggactgaagcaagaggtg
gagaagtacatcaaggacaacgcagtgttgaaaaggtgctcagaaacctgtaagattggt
cacagatctaacaaaagggatccttgtgcttgtgtttgcaacagtagtaggaatgtcaag
tcaaactgctgtcctgctgggaaaggtcttgcaacattgaaggtcttcaagctctatgca
caagggttgtatggtgataagtggactcagacagatggttcagtgaaggtgaaatatgga
gatcagcttaaacgcactcaaatcattagtaacaatgacaatcctagatggtcggagagc
tttatgtttggacccatcgtgattagcatgcaaaacaaactcacgttcagtgtttatgat
gaggacagttactgggatagtgatctgttaggccagtgctttattgatctgcgtcaaggg
acagtaagtgactcttgcatgttgaatcatggcaccttattcttctcctacatagtagag
tgtgcaccaagtctcagcggagaccaatgtcaagaatacataccatcccccatgagtacc
tctctggccaaggtcttctacaccagaaacggggtccttctcgggaccgaggagagtaat
gccataccagacgttcagtcagggttgaggtcagcagtagacgatgagagtgatgataga
gcaactgtttga
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