Anoplopoma fimbria (sablefish): 129096247
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Entry
129096247 CDS
T09102
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb02010
ABC transporters
afb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129096247
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129096247
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129096247
Transporters [BR:
afb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
129096247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
129096247
NCBI-ProteinID:
XP_054460948
LinkDB
All DBs
Position
9:25037646..25077915
Genome browser
AA seq
2270 aa
AA seq
DB search
MSVSTQLGLLLWKNFTFRRRQTIQLLIEIIWPLFIFFILISVRVHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPGVVGNFNDSIISRLFNDAKKILLFTQNDK
SYEGYKGLLRALRKMQKNTARFKLKDFLQDNETLSHFLHHNASLPRHALKQIVEAEVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIADHDVSLLTQEIICNSSSDWLNKAQSHFLSNLDF
FKPIRRDVRSDPKVVQEVSAATYNLLESLGALAVELASMKSWKDMRKEILYLTVNATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDSETPSAYDNSSTPYC
NSMMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMRPKVWSFMENGEEMDMVRTMLQNNASAAFFNDQLSGTEWRVSDVSAFLMKVSEDQR
PAGSAYTWRDVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLNNQKFWAGI
VFPDIAHGNSTELPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSY
LQDVIEHGIIRAITGTKEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLRETMRIMGLNNGILWLSWFISSLIPLLISAGLLVVLLKMGNLLPYSDP
GVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KVLVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEDDSYNLTTSISLMLFDAVLY
GIMTWYIESVFPGQYGIPRPWYFPFMKSYWCGEKENTNISTPLSKKGNAEAVCIEEEPSH
IEPGVYIENLVKVYSHGKKLAVDGLSLRFYKGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYIHGKDIRSELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQ
IVNDCGLPHKRHSRTSTLSGGTQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDY
DLTLQSCRNSASTVSYIKKAEKEDNVSESSSDAGLGSEPESETTTIDVSLISNVIFKHVH
EARLVEDLGHEITYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDAVELSDGVVPTRTRRHHAFGDHQSCLKPFTEDDFEFNDSEGDPESRETDWLSGS
DGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPSLALDHSMYGEQFTFISNDLPEDPHVNKLLGALTDNPGFGTRCMEGQPIPDSPCTA
EEDEWSAPEVSQSIADLFDKGNWSMENPSPMCECSCEGRKRMLPECPASAGGLPPPQIKI
TAQDTLQNLTSRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSQFMAHTDDI
DDAITQLTRRFRLERGTAADRFFHSLSSFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNN
GILRASLQADQDPTKFGITASNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPAS
FVVFLIQERVNKAKHMQFISGVQPLLYWLANFVWDMCNYIVPATLVIIIFICFQQDAYVS
STNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELF
GSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGK
NLFAMAIEGLVFFTITVLIQYHFFFKARSSTSHLKPIGEEDEDVARERQRIMSGGGKSDI
LELRELTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSMVTGGEAY
LANKSVTKEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRK
LGLVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSII
KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPD
LRPVMGFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSKNKEDLSIEDYSVSQT
TLDQVFVNFAKDQSDEDHLKEAHLNKRDAVVVDISKLNTFLTNESRESCV
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtctccactcagctgggcttactgctttggaagaacttcacctttcgacggaga
cagactatccagctgctgattgagatcatctggcctctgttcatcttcttcatcctgatt
tcagtccgggtacactatccaccctacgagcaacatgaatgccatttccctaacaaggcc
atgccctcagcgggcaccctgccctgggtacaaggcatcatctgcaacgccaacaacccc
tgcttccgtaatcctacccctggcgagagtcccggggtggtgggaaacttcaatgattct
ataatctcccgtctattcaatgacgccaagaagatcctgctcttcactcagaatgataaa
agctacgagggctacaagggactgctgagggccctcaggaagatgcagaagaacactgct
cgtttcaagctgaaggactttttgcaggacaatgagaccctttcccacttcctgcaccac
aacgcctctcttcctcgtcacgcgctgaaacagatagtggaggctgaagtcaatctggag
aaggtgctgactaaaggttttggcttccatctccgagacctctgtaacacgacgcccctg
gaggagtttgtccacatcgccgaccacgacgtgtcccttctgactcaagaaatcatttgc
aattcctctagcgattggctaaacaaggcccagagtcacttcctgtccaacttggacttc
ttcaaacccattcggagggatgtgaggtcggaccccaaagtcgttcaggaagtctcagct
gcaacctacaatcttctggagagcctgggagcactggccgtggagcttgccagtatgaaa
agttggaaggacatgcgtaaagagatcctgtatctgactgtgaatgcaacaggctctcca
aaccagatgtaccaggccgtgtcacgtattgtgtgcggacaccccgaaggaggcggcctc
aaaatcaagtctctaaactggtacgaggacaacaactacaaggccctgttcggaaaccat
ggcaacgacagcgacagtgaaacaccctcagcttacgacaactcttccactccctattgt
aacagcatgatgcggagcctggagtccagccccatttccaggatgatctggagagccctg
aagccgctactcatggggaagatcctgtacaccccagatactccagccacacagagaatc
atccacgaggttaataagaccttccaggagctcggcgtgctcagggacctcggagggatg
tgggaggagatgaggcccaaagtgtggagcttcatggagaatggcgaggaaatggacatg
gtcaggacgatgctccagaataacgccagtgctgcgttctttaatgaccagctcagtggg
actgagtggcgtgtgtcagatgtgtcggccttcctgatgaaggtctcagaggaccaaaga
cctgctggatccgcctacacctggagagacgtcttcaatgaaaccgaccaggccatccag
accatctcacgcttcatggagtgtgtcaacctggacaagctggagccagtagctaatgag
gagagactggtcaacaagtccatgggtcttctgaacaaccagaagttctgggccggaatc
gtgtttcctgacatcgcccatggcaacagcactgagctgcctcccaacgtcaactataag
atccgcatggacattgataacgtggagaggacaaacaagattaaggacggctattgggac
cccggtcctagggcagaccccttcgaggaccttcggtacatctggggtggattttcttac
ctgcaggacgtcatcgagcatggaatcatcagagccatcaccggcaccaaggagaagacg
ggcatctacattcagcagatgccctacccctgctatgttgatgacatcttcctgcgggtg
atgagtcggtccatgcctctcttcatgaccctggcgtggatgtactcggtagccatcatc
atcaagggcgtggtgtacgagaaggaggcgcggctcagggagaccatgaggatcatgggt
ctgaacaacggcatcctgtggctcagctggttcatcagcagcttgatcccgctcctgatc
agcgccggcttgttggtggtgttattgaagatgggaaacctgctgccttacagtgaccca
ggcgtggtgtttcttttcctgggatccttcggcgtcgtgaccatcatgcagtgtttcctc
atcagcactctgttctctcgtgccaacttggcagccgcctgcggtggcatcatatacttc
acgctctacctgccctacgtgctgtgtgtcgcctggcaagactacgtgggctttggagcg
aaagttttagtgagtctgctgtctccggtggcgtttggttttggctgtgagtactttgcc
ctgtttgaggagcaaggggtgggcatccagtggtccaacctgctggccagccccttggag
gacgacagctacaacctgaccacctctatctccctcatgctgttcgacgctgtgctctac
ggaataatgacctggtacatcgaatctgtgttccctggtcagtatgggatccccaggcct
tggtacttccctttcatgaagtcgtactggtgtggagagaaagagaacacaaacatctcc
acccctttgtcaaagaagggcaacgctgaagctgtgtgtattgaggaggagccgagccac
atcgagccaggtgtttacatcgagaatctggtgaaggtctacagccacggaaagaagctg
gccgtagacggactgtccctgaggttctataagggacagataacctccttcctcggccac
aatggagctggcaagaccacaaccatgtcaatcctgactgggttgttcccacccacatct
ggcacagcctacatccacggcaaggacatccgcagcgaactcagcaccatccgtcagaat
ctgggcgtctgcccccagcacaacgttcttttcagcatgctgacggtggaggaacacatc
tggttctacgcccgtctgaaggggctgccggaggagaaggtgaaggctgagatggaacaa
attgtgaacgattgtggactgcctcacaaacgacattcccgcaccagcacgctctccgga
gggactcagaggaaactatcagtggccctggcttttgttggtggatcaaaagttgtgatc
ctggatgaacccactgccggggtcgatccctacgcacgcaggggcatctgggacctgctg
cttaaatacagacaaggccgcaccatcatcctgtccactcatcacatggacgaggccgac
atcctgggtgaccgcatcgccatcatttcccacggcaagctgtgctgcgtgggctcctcg
ctcttcctgaagacccagctgggcaccggctactacctgaccctggtcaagagagactac
gacttgacgcttcagtcctgcaggaattccgccagcaccgtgtcctacatcaagaaggcc
gagaaggaggacaatgtatcagagagcagctcagatgctggtctgggcagtgaaccagag
agcgaaaccaccactattgatgtgtccctcatctccaacgtgatattcaagcacgtccac
gaggctcgcctggtcgaggaccttggtcatgaaatcacctatgtcttgccctaccagtca
gctaaagacggagcctttgtagagctcttccacgagctggatgaccgccttaccgacctg
ggaatatcaagctatggaatatcggataccaccctggaggagattttcttgaaagtggct
gaggacagtggagtagacgctgttgagctctcagatggagtcgtgccgaccaggactcgt
cgccatcatgcattcggagaccaccagagctgcctgaagcccttcaccgaggacgacttt
gaattcaacgactctgaaggtgacccagaatcccgagagaccgactggctcagtggaagc
gatggcaaaggctcgtatcaggtcaaaggctggagtctgaagagacagcagtttgttgca
ctactctggaaacgattcctctacgcccggcgctccaggaaaggcttctttgctcagatt
gttcttccggccgtgtttgtgtgtattgccctggtgttcagcctgattgtccctccgttt
ggaaagtacccaagtctggctctggatcacagcatgtatggagaacagttcaccttcatc
agtaatgacctacctgaagaccctcacgtcaacaaactactgggagctctgacagataac
ccaggatttggaacacgctgcatggaaggacaacccatacctgattccccctgcacagca
gaagaggatgagtggtcggccccggaagtctctcaaagtatagcggacttattcgacaaa
ggcaactggtccatggagaatccctctcccatgtgtgagtgcagctgtgaaggacgcaaa
aggatgcttcctgagtgtcctgccagcgctgggggacttccaccacctcagattaagatc
accgcccaagatactcttcagaatttgaccagccgaaacatctctgactatctggttaaa
acctacgctcagatcattggcaagagcctgaagaacaagatttgggtcaacgagttcaga
tatggtggattctcgttgggcgccaggagttctcagttcatggcccacacagacgacatt
gatgatgctatcactcaactgacgaggcgtttccgtctggagagaggaactgcagcggat
cgtttctttcacagtctctccagttttatacaagggttggacaccaagaataatgtcaag
atctggttcaacaacaagggctggcacagcatcggttctttcctcaacgtgatgaacaac
ggcatcctgcgggcgagtctgcaagccgaccaagaccccaccaagtttggcatcaccgcc
tccaatcacccgctcaacctcaccaaggagcagctgtcacaggtcgcattgatgacgaca
tcggtggatgtgctggtttccatctgcgtgatcttcgccatgtccttcgtccctgccagc
tttgttgtcttcctcatccaggagagagtgaacaaggccaaacacatgcagttcatcagc
ggagtgcagcctctcctctattggctggccaactttgtctgggatatgtgtaactacatc
gtcccggccacactggttatcataatcttcatctgcttccaacaagacgcctacgtctcc
tccaccaatctgcccgttctggcgctgctgctgctactctacggatggtcgatcacccct
ctcatgtacccagcctcgttcttcttcaagatccccagcacggcctacgtggttctgacc
agcgttaacatactgatagggatcaacggcagcgtctccacatttgttctggagctgttt
ggaagcaatgaaatcggtggcatcaacgacatcctgaagaacgtgttcctcatcttccct
cacttctgtctgggcagaggactgatagacatggtgaagaatcaggcaatggccgacgct
ttggagagatttggtgaaaaccggttccgctcccctctggcctgggacatggtgggaaag
aacctgtttgctatggccatagagggcctggtcttcttcactatcactgtcctcattcag
taccacttcttcttcaaggccaggtcatccaccagtcatctgaagcctattggagaagaa
gatgaggacgtggccagagagcgacagaggatcatgagcggaggaggaaagtcagacatc
ctggagctcagagagctcaccaagatttacaaaaggaaacagaagccggcagtggacaga
ctgtgtgtcggcatcccccctggagagtgctttggtttgctgggggtgaatggagcagga
aaaacaagcacctttaaaatgctgactggagactctatggtgaccgggggagaggcttac
ctggctaacaagagtgtaaccaaagagatcgacgaggtgcatcagaacatgggctactgt
cctcagtttgatgccatcaacgacctgctgaccggcagagagcacctggagttttacgcc
atcctgagaggagtgcctgagaaggaagtctgtgaggtggcagagtggggcatccggaag
ctgggtttggtcaagtatgtggacaagtcagcgggcagctacagtggaggaaacatgagg
aaactgtctactgccatcgctctcataggaggaccacctgtagtctttttggatgaaccg
accacgggcatggatcctaaagcacggcgcgctctgtggaacgcaatcctgagcatcatc
aaagagggacgatctgtagtcctgacctctcacagtatggaggagtgtgaagcactttgc
accagaatggccatcatggtcaacggcaggttccgctgtctgggcagtgtgcagcatctc
aaaaacaggtttggcgatggctacaccatcatcctgcgagtggccggcccggacccagac
ctccggccggtgatggggttcatcgagcgggagttgcctggcagcacgctgaaggagaaa
caccgcaacatgctgcaataccagctgccctcctccctcacctccctcgcccgcatcttc
tccctgctctctaagaacaaggaggacctcagcatagaggactactccgtctcacagaca
actttagaccaagtttttgtaaatttcgccaaggaccaaagtgatgaggaccatctgaaa
gaggcccatctgaacaaacgggacgctgtggtagtggacatttccaagctaaacactttt
ctcacgaacgagtcgcgggagagctgtgtctga
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integrated database retrieval system
