KEGG   Anoplopoma fimbria (sablefish): 129096248
Entry
129096248         CDS       T09102                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:afb03041]
    129096248
Spliceosome [BR:afb03041]
 Complex B
  Other components
   Complex B specific factors
    129096248
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th NBCH_WD40 LisH_TPL WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_TEP1_C Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_WDR75_2nd TFIIIC_delta WD40_RFWD3 VPS8_N Mala_s_1-like PD40 DUF7165 WDR54 Beta-prop_IFT122_2nd LisH
Other DBs
NCBI-GeneID: 129096248
NCBI-ProteinID: XP_054460952
LinkDB
Position
9:complement(10655989..10663811)
AA seq 509 aa
MATEMEPSDVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFIADIKSGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYIHLENL
LTCSYFDPREAYPKGSNKEKRRREIAEALVREVSVVPPSRLMGLLEQSMRIQQYPDHLSP
DMSMDTSGNKDRQTEKESFPTQLYRHIKFGRRSHVECARFSPDGKYLITGSVDGFIEVWN
FNTGKISKDLKYQAQDSFMMMDDAVLCMCFSQDTDLLATGAQNGKIKVWKIQSGSCLRRL
EHAHNKGVTCLSFSKDNNQILSASFNQTIRIHELKSGKTLKELNSHSSFVNDAFFTQDGF
HIISASSDGTVKIWNTTSCECVHTFKSLCRTSEVPVNNVIPLPQNPEHFVICNHSNTVVI
MSMNGQTVKTFSSDRKEKADFVCCTLSPHGEWIYCVGEDLVLYCFNYTTGRLEKTLTVHE
KDVIGITHHPHENLIATYSEDGLLRLWKP
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggctactgagatggagccctcggatgtgatccgcctcataatgcagtacctgaaggag
aacaacctctacagaacactgaccaccttacaggaggaaacaaccgtctcgctcaacacc
gtggagagcatcgacagcttcatcgcagacataaagagcggccactgggactccgtcctg
ctggctatcgagtccctcaagttgcctgacaacacgcttattgacctttatgaacaggtt
gtaatggagctcattgaaatgagggaggtgggggccgctcgctcactcctcagacaaact
gacccgatgatcatgttgaagcagacgcagccagagaggtacatccatttggaaaacctg
ctaacatgctcatactttgaccctcgtgaggcgtacccgaaaggcagcaacaaggagaag
cggcgcagagaaatagcggaggcgttggtgagggaggtcagcgtggtgccaccttctcgc
ctcatggggctcctggaacaatctatgagaatacaacagtatccagatcacctctccccc
gacatgtctatggacacatctggcaacaaggacagacaaacggagaaggagagctttcca
acacagctgtaccgtcacatcaagtttgggcggcggtcacatgtggagtgtgcccgtttc
tctcctgatggcaaatacttaatcactggatcagtggacgggttcattgaagtctggaac
tttaacactggaaaaattagtaaggatttaaaataccaggcccaagacagcttcatgatg
atggatgatgctgtgctgtgtatgtgcttcagtcaggatacagatctactggcaactgga
gctcagaatggcaaaataaaggtgtggaagattcagagcggctcgtgtctgcgcaggttg
gagcatgctcacaacaaaggtgtgacctgtctgagcttctccaaggacaacaaccagatc
ctcagtgcctcctttaaccagaccatcagaattcatgaactgaaatcaggcaagacacta
aaggagttaaacagccattcatcgttcgtaaatgatgcatttttcactcaagacggattt
cacatcatcagtgcctcatctgatggcacagtgaagatttggaatacaacatcctgcgag
tgcgtccacactttcaaatctctgtgccggacctcagaagttcccgtcaacaatgtgatc
cctcttccccaaaatccagagcactttgtgatttgtaatcactccaacacggtggtcatc
atgagcatgaacggtcagactgtaaagaccttcagctctgacagaaaggaaaaggcagat
tttgtgtgctgcaccctgtcaccccacggggagtggatttactgtgtgggagaggactta
gtgctgtactgcttcaactatacgacaggaaggctggagaaaacgctgactgttcatgag
aaagatgtaattggcatcactcaccacccacatgagaatctgatcgccacatacagcgag
gacggcctactgaggctatggaaaccttaa

DBGET integrated database retrieval system