KEGG   Anoplopoma fimbria (sablefish): 129096250
Entry
129096250         CDS       T09102                                 
Symbol
xpa
Name
(RefSeq) DNA repair protein complementing XP-A cells
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    129096250 (xpa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afb03400]
    129096250 (xpa)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     129096250 (xpa)
SSDB
Motif
Pfam: XPA_C XPA_N Ion_trans_N
Other DBs
NCBI-GeneID: 129096250
NCBI-ProteinID: XP_054460955
LinkDB
Position
9:25238847..25242858
AA seq 274 aa
MDPSESEGQRAGLDPEQSPKPELSAAMRAKIERNRQQALMLRQARLASRPSSAVEGATSA
KVSKTIDSGAGFFIEEGEDAEEEKRTRKVVHQPAPVIEPDYLLCDDCEKPFMDSYLSNSF
DLSVCDKCRDNEEKHKLISRTEAKQQYLLKDCDLDKREPPLRCILKKNPHNTQWGDMKLY
LKLQVEKRSMEVWGSEEALEEAKETREENRETQKQKRFNKKVKELRRAVRSSMWTKDTSV
HQHQYGPEEVVDPEEDLYKKTCTTCGHELTYEKM
NT seq 825 nt   +upstreamnt  +downstreamnt
atggatccgtcagagtcagagggacagagagctggcctcgacccagagcagagtcccaaa
cccgagctttctgcagcgatgcgggctaaaatcgagaggaaccgacagcaggcgctgatg
ctccggcaagcgcgactcgcaagccgcccgtcgtccgctgtggagggggcgacctcggca
aaagtctccaagaccatcgactctggagccggcttcttcatcgaggagggcgaggacgcg
gaggaggagaagaggaccaggaaggttgtgcatcagccagctccagtcatcgagccagac
tacctgctgtgcgatgattgtgaaaaaccctttatggactcgtacctcagcaacagcttt
gacctgtctgtctgtgataagtgcagagacaacgaggagaagcataagcttatctccaga
accgaggccaagcagcaataccttctgaaggactgtgacctggacaagagagagcctcca
ctcaggtgtatactgaagaaaaaccctcacaacactcagtggggagacatgaagctttac
ctcaaattacaggtggagaagaggagtatggaagtgtggggttcagaggaggccctggag
gaggccaaagagacgagggaagagaaccgagagacgcagaaacaaaaacgcttcaacaag
aaggtcaaagagctgcgcagggcggtaaggagcagtatgtggaccaaagacaccagcgtt
caccaacatcagtatggaccagaggaggtggtagatccggaggaggacctatacaagaaa
acctgcaccacctgcggacatgaactcacatacgagaagatgtag

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